RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 TBC1D26Q86UD7 250 aa9.71□□□□□ -0.86
CHD3-206ENST00000452447 SLC38A6Q8IZM9 456 aa9.71□□□□□ -0.86
CHD3-206ENST00000452447 TMEM61Q8N0U2 210 aa9.71□□□□□ -0.86
CHD3-206ENST00000452447 OR5B3Q8NH48 314 aa9.71□□□□□ -0.86
CHD3-206ENST00000452447 MARC2Q969Z3 335 aa9.71□□□□□ -0.86
CHD3-206ENST00000452447 SRD5A3Q9H8P0 318 aa9.71□□□□□ -0.86
CHD3-206ENST00000452447 EDA2RQ9HAV5 297 aa9.71□□□□□ -0.86
CHD3-206ENST00000452447 FAM212BQ9NTI7 297 aaPredicted RBP9.71□□□□□ -0.86
CHD3-206ENST00000452447 MLXQ9UH92 298 aa9.71□□□□□ -0.86
CHD3-206ENST00000452447 UFC1Q9Y3C8 167 aa9.71□□□□□ -0.86
CHD3-206ENST00000452447 TENM2Q9NT68 2774 aa9.7□□□□□ -0.86
CHD3-206ENST00000452447 SCAF4O95104 1147 aaKnown RBP9.7□□□□□ -0.86
CHD3-206ENST00000452447 BTNL8Q6UX41 500 aa9.7□□□□□ -0.86
CHD3-206ENST00000452447 RBPMS2Q6ZRY4 209 aaKnown RBP9.7□□□□□ -0.86
CHD3-206ENST00000452447 OR52B4Q8NGK2 314 aa9.7□□□□□ -0.86
CHD3-206ENST00000452447 OR1L6Q8NGR2 347 aa9.7□□□□□ -0.86
CHD3-206ENST00000452447 C15orf40Q8WUR7 153 aa9.7□□□□□ -0.86
CHD3-206ENST00000452447 SLIRPQ9GZT3 109 aaKnown RBP9.7□□□□□ -0.86
CHD3-206ENST00000452447 WFDC10AQ9H1F0 79 aa9.7□□□□□ -0.86
CHD3-206ENST00000452447 MRPL27Q9P0M9 148 aaKnown RBP9.7□□□□□ -0.86
CHD3-206ENST00000452447 F11RQ9Y624 299 aaKnown RBP9.7□□□□□ -0.86
CHD3-206ENST00000452447 RYR2Q92736 4967 aa9.69□□□□□ -0.86
CHD3-206ENST00000452447 OR2T8A6NH00 312 aa9.69□□□□□ -0.86
CHD3-206ENST00000452447 C15orf61A6NNL5 157 aa9.69□□□□□ -0.86
CHD3-206ENST00000452447 TGOLN2O43493 480 aa9.69□□□□□ -0.86
CHD3-206ENST00000452447 ELLP55199 621 aaPredicted RBP9.69□□□□□ -0.86
CHD3-206ENST00000452447 UCP3P55916 312 aa9.69□□□□□ -0.86
CHD3-206ENST00000452447 ZFAND6Q6FIF0 208 aa9.69□□□□□ -0.86
CHD3-206ENST00000452447 LINC00322Q6ZN03 302 aaPredicted RBP9.69□□□□□ -0.86
CHD3-206ENST00000452447 H2BFWTQ7Z2G1 175 aa9.69□□□□□ -0.86
CHD3-206ENST00000452447 OR4A16Q8NH70 328 aa9.69□□□□□ -0.86
CHD3-206ENST00000452447 BSCL2Q96G97 398 aaPredicted RBP9.69□□□□□ -0.86
CHD3-206ENST00000452447 C21orf62Q9NYP8 219 aa9.69□□□□□ -0.86
CHD3-206ENST00000452447 IGHV3-21A0A0B4J1V1 117 aa9.68□□□□□ -0.86
CHD3-206ENST00000452447 M0QYG6 137 aa9.68□□□□□ -0.86
CHD3-206ENST00000452447 RNASE12Q5GAN4 147 aaKnown RBP9.68□□□□□ -0.86
CHD3-206ENST00000452447 RNASE10Q5GAN6 216 aaKnown RBP9.68□□□□□ -0.86
CHD3-206ENST00000452447 SPANXN2Q5MJ10 180 aa9.68□□□□□ -0.86
CHD3-206ENST00000452447 SPSB3Q6PJ21 355 aa9.68□□□□□ -0.86
CHD3-206ENST00000452447 UBAC2Q8NBM4 344 aa9.68□□□□□ -0.86
CHD3-206ENST00000452447 SCARB1Q8WTV0 552 aa9.68□□□□□ -0.86
CHD3-206ENST00000452447 S100ZQ8WXG8 99 aa9.68□□□□□ -0.86
CHD3-206ENST00000452447 ATP6V0BQ99437 205 aa9.68□□□□□ -0.86
CHD3-206ENST00000452447 ZNF436Q9C0F3 470 aaPredicted RBP9.68□□□□□ -0.86
CHD3-206ENST00000452447 NXF2Q9GZY0 626 aaKnown RBP9.68□□□□□ -0.86
CHD3-206ENST00000452447 HIPK2Q9H2X6 1198 aa9.68□□□□□ -0.86
CHD3-206ENST00000452447 TMEM14BQ9NUH8 114 aa9.68□□□□□ -0.86
CHD3-206ENST00000452447 KLK11Q9UBX7 282 aa9.68□□□□□ -0.86
CHD3-206ENST00000452447 TRAV25A0A0B4J276 109 aa9.67□□□□□ -0.86
CHD3-206ENST00000452447 RBMY1BA6NDE4 496 aaKnown RBP9.67□□□□□ -0.86
CHD3-206ENST00000452447 RBMY1EA6NEQ0 496 aaKnown RBP9.67□□□□□ -0.86
CHD3-206ENST00000452447 RBMY1DP0C7P1 496 aaKnown RBP9.67□□□□□ -0.86
CHD3-206ENST00000452447 C8orf88P0DMB2 117 aa9.67□□□□□ -0.86
CHD3-206ENST00000452447 PGAM2P15259 253 aa9.67□□□□□ -0.86
CHD3-206ENST00000452447 MFAP2P55001 183 aa9.67□□□□□ -0.86
CHD3-206ENST00000452447 Q56UQ5 140 aa9.67□□□□□ -0.86
CHD3-206ENST00000452447 OR1P1Q8NH06 330 aa9.67□□□□□ -0.86
CHD3-206ENST00000452447 TMEM190Q8WZ59 177 aa9.67□□□□□ -0.86
CHD3-206ENST00000452447 SEC22AQ96IW7 307 aa9.67□□□□□ -0.86
CHD3-206ENST00000452447 C20orf24Q9BUV8 137 aa9.67□□□□□ -0.86
CHD3-206ENST00000452447 RETNQ9HD89 108 aa9.67□□□□□ -0.86
CHD3-206ENST00000452447 DAZ1Q9NQZ3 744 aaKnown RBP9.67□□□□□ -0.86
CHD3-206ENST00000452447 EXTL2Q9UBQ6 330 aa9.67□□□□□ -0.86
CHD3-206ENST00000452447 DBX1A6NMT0 343 aa9.67□□□□□ -0.86
CHD3-206ENST00000452447 MRGPRFQ96AM1 343 aa9.67□□□□□ -0.86
CHD3-206ENST00000452447 ZNF486Q96H40 463 aaPredicted RBP9.67□□□□□ -0.86
CHD3-206ENST00000452447 GAR1Q9NY12 217 aaKnown RBP9.67□□□□□ -0.86
CHD3-206ENST00000452447 K7EIM0 57 aa9.66□□□□□ -0.86
CHD3-206ENST00000452447 NDUFA4O00483 81 aa9.66□□□□□ -0.86
CHD3-206ENST00000452447 CD3DP04234 171 aa9.66□□□□□ -0.86
CHD3-206ENST00000452447 TBPP20226 339 aa9.66□□□□□ -0.86
CHD3-206ENST00000452447 PIGPP57054 158 aa9.66□□□□□ -0.86
CHD3-206ENST00000452447 LAMTOR1Q6IAA8 161 aa9.66□□□□□ -0.86
CHD3-206ENST00000452447 ARRDC1Q8N5I2 433 aa9.66□□□□□ -0.86
CHD3-206ENST00000452447 OR52I2Q8NH67 350 aa9.66□□□□□ -0.86
CHD3-206ENST00000452447 MISP3Q96FF7 219 aa9.66□□□□□ -0.86
CHD3-206ENST00000452447 DIRAS2Q96HU8 199 aa9.66□□□□□ -0.86
CHD3-206ENST00000452447 FAM110AQ9BQ89 295 aa9.66□□□□□ -0.86
CHD3-206ENST00000452447 CHRDL1Q9BU40 450 aa9.66□□□□□ -0.86
CHD3-206ENST00000452447 C5orf66Q9H5L9 145 aa9.66□□□□□ -0.86
CHD3-206ENST00000452447 MTFP1Q9UDX5 166 aa9.66□□□□□ -0.86
CHD3-206ENST00000452447 NUPL2O15504 423 aaKnown RBP9.65□□□□□ -0.86
CHD3-206ENST00000452447 IGKV1-39P01597 117 aa9.65□□□□□ -0.86
CHD3-206ENST00000452447 IGKV1D-39P04432 117 aa9.65□□□□□ -0.86
CHD3-206ENST00000452447 PI3P19957 117 aa9.65□□□□□ -0.86
CHD3-206ENST00000452447 RND3P61587 244 aa9.65□□□□□ -0.86
CHD3-206ENST00000452447 HSPE1P61604 102 aaKnown RBP9.65□□□□□ -0.86
CHD3-206ENST00000452447 ERHP84090 104 aaKnown RBP9.65□□□□□ -0.86
CHD3-206ENST00000452447 PRCDQ00LT1 54 aa9.65□□□□□ -0.86
CHD3-206ENST00000452447 OR2C3Q8N628 320 aa9.65□□□□□ -0.86
CHD3-206ENST00000452447 IL17DQ8TAD2 202 aa9.65□□□□□ -0.86
CHD3-206ENST00000452447 ABHD1Q96SE0 405 aa9.65□□□□□ -0.86
CHD3-206ENST00000452447 WDR12Q9GZL7 423 aaKnown RBP9.65□□□□□ -0.86
CHD3-206ENST00000452447 ATG12O94817 140 aa9.64□□□□□ -0.87
CHD3-206ENST00000452447 AKR1C2P52895 323 aa9.64□□□□□ -0.87
CHD3-206ENST00000452447 MFAP4P55083 255 aa9.64□□□□□ -0.87
CHD3-206ENST00000452447 TAS2R19P59542 299 aa9.64□□□□□ -0.87
CHD3-206ENST00000452447 RELQ04864 619 aaPredicted RBP9.64□□□□□ -0.87
CHD3-206ENST00000452447 SCGB2B2Q4G0G5 96 aa9.64□□□□□ -0.87
CHD3-206ENST00000452447 LHFPL1Q86WI0 220 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms