RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 IGKV1-33P01594 117 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 PLP1P60201 277 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 REC114Q7Z4M0 266 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 SAA2-SAA4A0A096LPE2 208 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 FAM181BA6NEQ2 426 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 SAA2P0DJI9 122 aaPredicted RBP11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 ID3Q02535 119 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 RPP21Q9H633 154 aaKnown RBP11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 C21orf62Q9NYP8 219 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 PPP1R17O96001 155 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 TRGV3P03979 118 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 HIST1H1AQ02539 215 aaPredicted RBP11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 MIR17HGQ75NE6 70 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 ARPC1AQ92747 370 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 FBXL7Q9UJT9 491 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 ZSWIM8A7E2V4 1837 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 TRBV20OR9-2A0A075B6H5 130 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 C7orf71A4D174 169 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 MORN2Q502X0 79 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 DPRXA6NFQ7 191 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 NPFFO15130 113 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 SOD3P08294 240 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 CENPVQ7Z7K6 275 aaPredicted RBP11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 ZIC4Q8N9L1 334 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 ABHD17AQ96GS6 310 aa11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 FOXA2Q9Y261 457 aaPredicted RBP11.07□□□□□ -0.64
SMARCA4-205ENST00000450717 ANK1P16157 1881 aa11.06□□□□□ -0.64
SMARCA4-205ENST00000450717 SAA1P0DJI8 122 aaPredicted RBP11.06□□□□□ -0.64
SMARCA4-205ENST00000450717 PPP1R27Q86WC6 154 aa11.06□□□□□ -0.64
SMARCA4-205ENST00000450717 SCN2AQ99250 2005 aa11.06□□□□□ -0.64
SMARCA4-205ENST00000450717 IZUMO1RA6ND01 250 aa11.06□□□□□ -0.64
SMARCA4-205ENST00000450717 H0YIZ8 118 aa11.06□□□□□ -0.64
SMARCA4-205ENST00000450717 H7C1H1 209 aa11.06□□□□□ -0.64
SMARCA4-205ENST00000450717 CIARTQ8N365 385 aaPredicted RBP11.06□□□□□ -0.64
SMARCA4-205ENST00000450717 SLC17A3O00476 420 aa11.06□□□□□ -0.64
SMARCA4-205ENST00000450717 TMEM105Q8N8V8 129 aa11.06□□□□□ -0.64
SMARCA4-205ENST00000450717 GEMIN7Q9H840 131 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-205ENST00000450717 CBLN4Q9NTU7 201 aa11.06□□□□□ -0.64
SMARCA4-205ENST00000450717 A0A0G2JLM5 398 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 PCP4P48539 62 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 RPL23P62829 140 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 NABP1Q96AH0 204 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 WFIKKN1Q96NZ8 548 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 A0A1B0GUT8 65 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 ASIPP42127 132 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 PRELID3AQ96N28 172 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 CLPSP04118 112 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 OTX1P32242 354 aaPredicted RBP11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 MEIG1Q5JSS6 88 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 KCNS1Q96KK3 526 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 OTORQ9NRC9 128 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 SEMA5BQ9P283 1151 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 TRPM7Q96QT4 1865 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 LDLRAD4O15165 306 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 EFNA2O43921 213 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 HOXA5P20719 270 aa11.05□□□□□ -0.64
SMARCA4-205ENST00000450717 PINLYPA6NC86 204 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 PSMG4Q5JS54 123 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 FAM74A4Q5TZK3 123 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 LHFPL1Q86WI0 220 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 CSRP1P21291 193 aaKnown RBP11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 ZNF414Q96IQ9 312 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 PARD6GQ9BYG4 376 aaPredicted RBP11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 SPRR3Q9UBC9 169 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 CCL20P78556 96 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 ATRAIDQ6UW56 229 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 RNASE6Q93091 150 aaKnown RBP11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 Q9H3A6 140 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 GGNQ86UU5 652 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 IGHV1-18A0A0C4DH31 117 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 CEACAM4O75871 244 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 PRSS2P07478 247 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 SCGB1A1P11684 91 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 WNT10AQ9GZT5 417 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 KLK15Q9H2R5 256 aa11.04□□□□□ -0.64
SMARCA4-205ENST00000450717 PVRIGQ6DKI7 326 aa11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 ALKBH7Q9BT30 221 aaPredicted RBP11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 TBL2Q9Y4P3 447 aaKnown RBP11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 F11RQ9Y624 299 aaKnown RBP11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 A1L4Q6 167 aa11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 SAMD13Q5VXD3 122 aa11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 IGKV1D-8A0A087WSZ0 117 aa11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 OR11H12B2RN74 326 aa11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 NBR2O15453 112 aa11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 OR11H1Q8NG94 326 aa11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 OR11H2Q8NH07 326 aa11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 LOC105371267A0A1B0GV96 52 aa11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 NUTF2P61970 127 aaKnown RBP11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 NUP37Q8NFH4 326 aa11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 FGFBP3Q8TAT2 258 aa11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 MBD3L1Q8WWY6 194 aa11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 TMEM133Q9H2Q1 129 aa11.03□□□□□ -0.64
SMARCA4-205ENST00000450717 RAMP3O60896 148 aa11.02□□□□□ -0.64
SMARCA4-205ENST00000450717 DUTP33316 252 aaKnown RBP11.02□□□□□ -0.64
SMARCA4-205ENST00000450717 FOXA3P55318 350 aaPredicted RBP11.02□□□□□ -0.64
SMARCA4-205ENST00000450717 PRCDQ00LT1 54 aa11.02□□□□□ -0.64
SMARCA4-205ENST00000450717 IGHV3-35A0A0C4DH35 117 aa11.02□□□□□ -0.65
SMARCA4-205ENST00000450717 IGKV1-12A0A0C4DH73 117 aa11.02□□□□□ -0.65
SMARCA4-205ENST00000450717 ATP5LO75964 103 aa11.02□□□□□ -0.65
SMARCA4-205ENST00000450717 IGKV1D-12P01611 117 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms