RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 HBBP68871 147 aa11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 SDF2L1Q9HCN8 221 aa11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 MSGN1A6NI15 193 aa11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 CCL3L1P16619 93 aa11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 NBR2O15453 112 aa11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 NRXN2Q9P2S2 1712 aa11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 DANCRP0C864 163 aa11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 TFF3Q07654 80 aa11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 A0A0G2JK05 382 aa11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 DPRXA6NFQ7 191 aa11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 TMEM170BQ5T4T1 132 aa11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 BEX4Q9NWD9 120 aaPredicted RBP11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 LAMTOR2Q9Y2Q5 125 aa11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 PARP14Q460N5 1801 aa11.76□□□□□ -0.53
RAPGEF3-205ENST00000449771 ZP1P60852 638 aa11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 CGAP01215 116 aa11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 C2orf68Q2NKX9 166 aa11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 REPIN1Q9BWE0 567 aaKnown RBP11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 LYNX1G3V0Z9 82 aa11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 LYNX1P0DP58 116 aa11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 TBR1Q16650 682 aa11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 TMEM160Q9NX00 188 aa11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 JKAMPQ9P055 326 aa11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 SPRR3Q9UBC9 169 aa11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 NUP214P35658 2090 aaPredicted RBP11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 BRWD1Q9NSI6 2320 aa11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 MUC21A0A0G2JKD1 596 aa11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 MUC21A0A140T8X8 626 aa11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 MUC21Q5SSG8 566 aa11.75□□□□□ -0.53
RAPGEF3-205ENST00000449771 TRBV9A0A0B4J1U6 114 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 E9PLN8 166 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 LDLRAD4O15165 306 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 PAX1P15863 534 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 EGR1P18146 543 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 BIVMQ86UB2 503 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 C10orf126Q8N4M7 172 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 VKORC1Q9BQB6 163 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 MYOD1P15172 320 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 GPX4P36969 197 aaPredicted RBP11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 CACNG7P62955 275 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 RPRMQ9NS64 109 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 SPCS1Q9Y6A9 102 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 OR52E5Q8NH55 327 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 PSMG3Q9BT73 122 aaPredicted RBP11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 SAA2-SAA4A0A096LPE2 208 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 SAA2P0DJI9 122 aaPredicted RBP11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 FMC1Q96HJ9 113 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 CA7P43166 264 aa11.74□□□□□ -0.53
RAPGEF3-205ENST00000449771 DNAL4O96015 105 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 TDGF1P13385 188 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 C11orf44Q8N8P7 122 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 PLSCR2Q9NRY7 297 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 LRRC37AA6NMS7 1700 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 SAA1P0DJI8 122 aaPredicted RBP11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 CD24P25063 80 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 LEPP41159 167 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 RNASEH2CQ8TDP1 164 aaKnown RBP11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 GLMPQ8WWB7 406 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 ZCCHC24Q8N2G6 241 aaKnown RBP11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 SLC17A3O00476 420 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 PEX7O00628 323 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 CD59P13987 128 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 CFAP161Q6P656 301 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 C8orf46Q8TAG6 207 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 TMEM167AQ8TBQ9 72 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 PRELID3AQ96N28 172 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 TUBGCP6Q96RT7 1819 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 GTSCR1Q86UQ5 136 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 PLPPR1Q8TBJ4 325 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 DEPPQ9NTK1 212 aa11.73□□□□□ -0.53
RAPGEF3-205ENST00000449771 IGHV1-18A0A0C4DH31 117 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 A0A1B0GWB2 263 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 GTF3AQ92664 365 aaKnown RBP11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 NCOR1P1Q9H4R4 102 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 TOMM7Q9P0U1 55 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 C18orf15Q96N68 181 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 TMEM133Q9H2Q1 129 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 LOC102723996A0A087X1L8 192 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 PINLYPA6NC86 204 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 FAM71F2Q6NXP2 309 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 CKS1BP61024 79 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 IGLV3-12A0A075B6K2 115 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 TRAV40A0A0B4J280 105 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 H3BRM9 83 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 MALP21145 153 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 ZFP36L1Q07352 338 aaKnown RBP11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 Q9H3A6 140 aa11.72□□□□□ -0.53
RAPGEF3-205ENST00000449771 TFF1P04155 84 aa11.71□□□□□ -0.53
RAPGEF3-205ENST00000449771 ZNF646O15015 1829 aaPredicted RBP11.71□□□□□ -0.53
RAPGEF3-205ENST00000449771 CITED1Q99966 193 aa11.71□□□□□ -0.53
RAPGEF3-205ENST00000449771 ZFC3H1O60293 1989 aaKnown RBP11.71□□□□□ -0.53
RAPGEF3-205ENST00000449771 SCGB3A1Q96QR1 104 aa11.71□□□□□ -0.54
RAPGEF3-205ENST00000449771 AICDAQ9GZX7 198 aa11.71□□□□□ -0.54
RAPGEF3-205ENST00000449771 TDRD6O60522 2096 aaKnown RBP11.71□□□□□ -0.54
RAPGEF3-205ENST00000449771 ST6GALNAC6Q969X2 333 aa11.71□□□□□ -0.54
RAPGEF3-205ENST00000449771 UNC13CQ8NB66 2214 aa11.71□□□□□ -0.54
RAPGEF3-205ENST00000449771 MIR17HGQ75NE6 70 aa11.7□□□□□ -0.54
RAPGEF3-205ENST00000449771 GATA2P23769 480 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF3-205ENST00000449771 DSCR9P59020 149 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms