RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 SFXN3Q9BWM7 321 aa11.16□□□□□ -0.62
POLR1B-209ENST00000448770 DCAF16Q9NXF7 216 aa11.16□□□□□ -0.62
POLR1B-209ENST00000448770 OR51B2Q9Y5P1 312 aa11.16□□□□□ -0.62
POLR1B-209ENST00000448770 CA1P00915 261 aaPredicted RBP11.15□□□□□ -0.62
POLR1B-209ENST00000448770 SP9P0CG40 484 aa11.15□□□□□ -0.62
POLR1B-209ENST00000448770 AREGP15514 252 aa11.15□□□□□ -0.62
POLR1B-209ENST00000448770 VHLLQ6RSH7 139 aa11.15□□□□□ -0.62
POLR1B-209ENST00000448770 TMEM136Q6ZRR5 245 aa11.15□□□□□ -0.62
POLR1B-209ENST00000448770 BAGE3Q86Y29 109 aa11.15□□□□□ -0.62
POLR1B-209ENST00000448770 BAGE2Q86Y30 109 aa11.15□□□□□ -0.62
POLR1B-209ENST00000448770 FAM103A1Q9BTL3 118 aaKnown RBP11.15□□□□□ -0.62
POLR1B-209ENST00000448770 PLSCR4Q9NRQ2 329 aa11.15□□□□□ -0.62
POLR1B-209ENST00000448770 ARFGEF3Q5TH69 2177 aa11.15□□□□□ -0.62
POLR1B-209ENST00000448770 PCNX2A6NKB5 2137 aa11.15□□□□□ -0.62
POLR1B-209ENST00000448770 SSBP2P81877 361 aaPredicted RBP11.15□□□□□ -0.62
POLR1B-209ENST00000448770 Q0VG73 95 aa11.15□□□□□ -0.62
POLR1B-209ENST00000448770 RPRMLQ8N4K4 120 aa11.15□□□□□ -0.62
POLR1B-209ENST00000448770 OR10W1Q8NGF6 305 aa11.15□□□□□ -0.62
POLR1B-209ENST00000448770 LY96Q9Y6Y9 160 aa11.15□□□□□ -0.62
POLR1B-209ENST00000448770 TANC2Q9HCD6 1990 aa11.15□□□□□ -0.62
POLR1B-209ENST00000448770 TRAV9-1A0A075B6T8 112 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 PRR33A8MZF0 331 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 FOSL1P15407 271 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 ZNF25P17030 456 aaPredicted RBP11.14□□□□□ -0.63
POLR1B-209ENST00000448770 CFHR2P36980 270 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 GNG4P50150 75 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 PAFAH1B2P68402 229 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 MRPS11P82912 194 aaKnown RBP11.14□□□□□ -0.63
POLR1B-209ENST00000448770 BHLHA15Q7RTS1 189 aaPredicted RBP11.14□□□□□ -0.63
POLR1B-209ENST00000448770 NHLRC2Q8NBF2 726 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 OR5AU1Q8NGC0 362 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 LINC00479Q96M42 142 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 UHRF2Q96PU4 802 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 TRAV5A0A0B4J249 113 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 KBTBD11-OT1A0A1B0GTJ5 212 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 HELTA6NFD8 242 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 KIR2DS2P43631 304 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 DEFB108BQ8NET1 73 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 FAM168AQ92567 244 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 IGF2BP2-AS1Q96M15 143 aa11.14□□□□□ -0.63
POLR1B-209ENST00000448770 J3QR06 171 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 CT45A6P0DMU7 189 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 CT45A5P0DMU8 189 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 CT45A7P0DMV0 189 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 CX3CL1P78423 397 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 C22orf34Q6ZV56 151 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 FAM216BQ8N7L0 139 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 MIEN1Q9BRT3 115 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 SLC25A10Q9UBX3 287 aaPredicted RBP11.13□□□□□ -0.63
POLR1B-209ENST00000448770 NAT8BQ9UHF3 227 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 E7EUB6 86 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 BMPR1BO00238 502 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 OR7C2O60412 319 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 GPX1P07203 203 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 MRPL54Q6P161 138 aaKnown RBP11.13□□□□□ -0.63
POLR1B-209ENST00000448770 GNB1LQ9BYB4 327 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 SAMD10Q9BYL1 202 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 TBL2Q9Y4P3 447 aaKnown RBP11.13□□□□□ -0.63
POLR1B-209ENST00000448770 DMXL1Q9Y485 3027 aa11.13□□□□□ -0.63
POLR1B-209ENST00000448770 TEX50A0A1B0GTY4 177 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 M0R1B8 84 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 NPSP0C0P6 89 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 RANP62826 216 aaKnown RBP11.12□□□□□ -0.63
POLR1B-209ENST00000448770 SUMO1P63165 101 aaKnown RBP11.12□□□□□ -0.63
POLR1B-209ENST00000448770 PRCDQ00LT1 54 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 POU2AF1Q16633 256 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 PRR31Q5SQ13 230 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 RND1Q92730 232 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 TMEM208Q9BTX3 173 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 YLPM1P49750 1951 aaKnown RBP11.12□□□□□ -0.63
POLR1B-209ENST00000448770 PSMB11A5LHX3 300 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 A8MXE2 369 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 UPK2O00526 184 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 RNASE2P10153 161 aaKnown RBP11.12□□□□□ -0.63
POLR1B-209ENST00000448770 RAB7AP51149 207 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 KRTDAPP60985 99 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 PPP1R35Q8TAP8 253 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 FAM167A-AS1Q96KT0 104 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 GAFA1Q96PS6 74 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 CCL13Q99616 98 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 ENY2Q9NPA8 101 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 TUBG2Q9NRH3 451 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 IL19Q9UHD0 177 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 PPIAL4AQ9Y536 164 aa11.12□□□□□ -0.63
POLR1B-209ENST00000448770 A0A1W2PS18 150 aa11.11□□□□□ -0.63
POLR1B-209ENST00000448770 ITGB1BP1O14713 200 aa11.11□□□□□ -0.63
POLR1B-209ENST00000448770 MT-CO2P00403 227 aa11.11□□□□□ -0.63
POLR1B-209ENST00000448770 OR5G3P0C626 314 aa11.11□□□□□ -0.63
POLR1B-209ENST00000448770 BRS3P32247 399 aa11.11□□□□□ -0.63
POLR1B-209ENST00000448770 STUMQ69YW2 141 aa11.11□□□□□ -0.63
POLR1B-209ENST00000448770 ZNF474Q6S9Z5 364 aaPredicted RBP11.11□□□□□ -0.63
POLR1B-209ENST00000448770 VAMP8Q9BV40 100 aa11.11□□□□□ -0.63
POLR1B-209ENST00000448770 SSBP3Q9BWW4 388 aaPredicted RBP11.11□□□□□ -0.63
POLR1B-209ENST00000448770 PLEKHA3Q9HB20 300 aa11.11□□□□□ -0.63
POLR1B-209ENST00000448770 PROCRQ9UNN8 238 aa11.11□□□□□ -0.63
POLR1B-209ENST00000448770 PLCE1Q9P212 2302 aa11.11□□□□□ -0.63
POLR1B-209ENST00000448770 SAA1P0DJI8 122 aaPredicted RBP11.11□□□□□ -0.63
POLR1B-209ENST00000448770 PMCHP20382 165 aa11.11□□□□□ -0.63
POLR1B-209ENST00000448770 CTRLP40313 264 aa11.11□□□□□ -0.63
POLR1B-209ENST00000448770 RAB31Q13636 194 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms