RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 SLC16A13Q7RTY0 426 aa13.31□□□□□ -0.28
DDX56-207ENST00000448192 SCARB1Q8WTV0 552 aa13.31□□□□□ -0.28
DDX56-207ENST00000448192 MARC2Q969Z3 335 aa13.31□□□□□ -0.28
DDX56-207ENST00000448192 BSCL2Q96G97 398 aaPredicted RBP13.31□□□□□ -0.28
DDX56-207ENST00000448192 SRD5A3Q9H8P0 318 aa13.31□□□□□ -0.28
DDX56-207ENST00000448192 C21orf62Q9NYP8 219 aa13.31□□□□□ -0.28
DDX56-207ENST00000448192 MTFP1Q9UDX5 166 aa13.31□□□□□ -0.28
DDX56-207ENST00000448192 DYNC2H1Q8NCM8 4307 aaKnown RBP13.3□□□□□ -0.28
DDX56-207ENST00000448192 ALDH3B2P48448 385 aa13.3□□□□□ -0.28
DDX56-207ENST00000448192 ELLP55199 621 aaPredicted RBP13.3□□□□□ -0.28
DDX56-207ENST00000448192 LHFPL1Q86WI0 220 aa13.3□□□□□ -0.28
DDX56-207ENST00000448192 ARRDC1Q8N5I2 433 aa13.3□□□□□ -0.28
DDX56-207ENST00000448192 OR52B4Q8NGK2 314 aa13.3□□□□□ -0.28
DDX56-207ENST00000448192 OR1L6Q8NGR2 347 aa13.3□□□□□ -0.28
DDX56-207ENST00000448192 C15orf40Q8WUR7 153 aa13.3□□□□□ -0.28
DDX56-207ENST00000448192 ISOC1Q96CN7 298 aa13.3□□□□□ -0.28
DDX56-207ENST00000448192 ZNF486Q96H40 463 aaPredicted RBP13.3□□□□□ -0.28
DDX56-207ENST00000448192 ZNF436Q9C0F3 470 aaPredicted RBP13.3□□□□□ -0.28
DDX56-207ENST00000448192 MIXL1Q9H2W2 232 aa13.3□□□□□ -0.28
DDX56-207ENST00000448192 MRPL27Q9P0M9 148 aaKnown RBP13.3□□□□□ -0.28
DDX56-207ENST00000448192 RBMY1BA6NDE4 496 aaKnown RBP13.29□□□□□ -0.28
DDX56-207ENST00000448192 RBMY1EA6NEQ0 496 aaKnown RBP13.29□□□□□ -0.28
DDX56-207ENST00000448192 RBMY1DP0C7P1 496 aaKnown RBP13.29□□□□□ -0.28
DDX56-207ENST00000448192 C8orf88P0DMB2 117 aa13.29□□□□□ -0.28
DDX56-207ENST00000448192 TBPP20226 339 aa13.29□□□□□ -0.28
DDX56-207ENST00000448192 PPP5CP53041 499 aa13.29□□□□□ -0.28
DDX56-207ENST00000448192 PIGPP57054 158 aa13.29□□□□□ -0.28
DDX56-207ENST00000448192 RND3P61587 244 aa13.29□□□□□ -0.28
DDX56-207ENST00000448192 SPCS2Q15005 226 aa13.29□□□□□ -0.28
DDX56-207ENST00000448192 Q56UQ5 140 aa13.29□□□□□ -0.28
DDX56-207ENST00000448192 SPSB3Q6PJ21 355 aa13.29□□□□□ -0.28
DDX56-207ENST00000448192 LINC00322Q6ZN03 302 aaPredicted RBP13.29□□□□□ -0.28
DDX56-207ENST00000448192 RBPMS2Q6ZRY4 209 aaKnown RBP13.29□□□□□ -0.28
DDX56-207ENST00000448192 OR4D10Q8NGI6 311 aa13.29□□□□□ -0.28
DDX56-207ENST00000448192 TMEM190Q8WZ59 177 aa13.29□□□□□ -0.28
DDX56-207ENST00000448192 CHRDL1Q9BU40 450 aa13.29□□□□□ -0.28
DDX56-207ENST00000448192 EDA2RQ9HAV5 297 aa13.29□□□□□ -0.28
DDX56-207ENST00000448192 RETNQ9HD89 108 aa13.29□□□□□ -0.28
DDX56-207ENST00000448192 K7EIM0 57 aa13.28□□□□□ -0.28
DDX56-207ENST00000448192 CTDSP2O14595 271 aa13.28□□□□□ -0.28
DDX56-207ENST00000448192 HSPE1P61604 102 aaKnown RBP13.28□□□□□ -0.28
DDX56-207ENST00000448192 IZUMO4Q1ZYL8 232 aa13.28□□□□□ -0.28
DDX56-207ENST00000448192 ANKRD55Q3KP44 614 aa13.28□□□□□ -0.28
DDX56-207ENST00000448192 SCGB2B2Q4G0G5 96 aa13.28□□□□□ -0.28
DDX56-207ENST00000448192 ZFAND6Q6FIF0 208 aa13.28□□□□□ -0.28
DDX56-207ENST00000448192 CLVS1Q8IUQ0 354 aaPredicted RBP13.28□□□□□ -0.28
DDX56-207ENST00000448192 TMEM229BQ8NBD8 167 aa13.28□□□□□ -0.28
DDX56-207ENST00000448192 OR1P1Q8NH06 330 aa13.28□□□□□ -0.28
DDX56-207ENST00000448192 MISP3Q96FF7 219 aa13.28□□□□□ -0.28
DDX56-207ENST00000448192 TP53RKQ96S44 253 aa13.28□□□□□ -0.28
DDX56-207ENST00000448192 C20orf24Q9BUV8 137 aa13.28□□□□□ -0.28
DDX56-207ENST00000448192 IGHV3OR16-8A0A075B7F1 116 aa13.27□□□□□ -0.29
DDX56-207ENST00000448192 RAB3DO95716 219 aa13.27□□□□□ -0.29
DDX56-207ENST00000448192 TAS2R19P59542 299 aa13.27□□□□□ -0.29
DDX56-207ENST00000448192 PRCDQ00LT1 54 aa13.27□□□□□ -0.29
DDX56-207ENST00000448192 STEAP1BQ6NZ63 245 aa13.27□□□□□ -0.29
DDX56-207ENST00000448192 OR2C3Q8N628 320 aa13.27□□□□□ -0.29
DDX56-207ENST00000448192 TERB2Q8NHR7 220 aa13.27□□□□□ -0.29
DDX56-207ENST00000448192 ZFAND1Q8TCF1 268 aa13.27□□□□□ -0.29
DDX56-207ENST00000448192 ATP6V0BQ99437 205 aa13.27□□□□□ -0.29
DDX56-207ENST00000448192 FAM110AQ9BQ89 295 aa13.27□□□□□ -0.29
DDX56-207ENST00000448192 HIPK2Q9H2X6 1198 aa13.27□□□□□ -0.29
DDX56-207ENST00000448192 DAZ1Q9NQZ3 744 aaKnown RBP13.27□□□□□ -0.29
DDX56-207ENST00000448192 COPZ2Q9P299 210 aa13.27□□□□□ -0.29
DDX56-207ENST00000448192 TRAV25A0A0B4J276 109 aa13.26□□□□□ -0.29
DDX56-207ENST00000448192 C3orf85A0A1B0GTC6 90 aa13.26□□□□□ -0.29
DDX56-207ENST00000448192 F8W735 103 aaPredicted RBP13.26□□□□□ -0.29
DDX56-207ENST00000448192 GABARAPH6UMI1 98 aa13.26□□□□□ -0.29
DDX56-207ENST00000448192 NDUFA4O00483 81 aa13.26□□□□□ -0.29
DDX56-207ENST00000448192 ZNF207O43670 478 aaKnown RBP13.26□□□□□ -0.29
DDX56-207ENST00000448192 ADMP35318 185 aa13.26□□□□□ -0.29
DDX56-207ENST00000448192 AKR1C2P52895 323 aa13.26□□□□□ -0.29
DDX56-207ENST00000448192 ERHP84090 104 aaKnown RBP13.26□□□□□ -0.29
DDX56-207ENST00000448192 SPINK9Q5DT21 86 aa13.26□□□□□ -0.29
DDX56-207ENST00000448192 OR13C8Q8NGS7 320 aa13.26□□□□□ -0.29
DDX56-207ENST00000448192 CSMD3Q7Z407 3707 aa13.26□□□□□ -0.29
DDX56-207ENST00000448192 IGKV1-5P01602 117 aa13.25□□□□□ -0.29
DDX56-207ENST00000448192 CD74P04233 296 aa13.25□□□□□ -0.29
DDX56-207ENST00000448192 CTSGP08311 255 aa13.25□□□□□ -0.29
DDX56-207ENST00000448192 MFAP4P55083 255 aa13.25□□□□□ -0.29
DDX56-207ENST00000448192 TRIM16LQ309B1 348 aa13.25□□□□□ -0.29
DDX56-207ENST00000448192 SP6Q3SY56 376 aa13.25□□□□□ -0.29
DDX56-207ENST00000448192 CCDC71LQ8N9Z2 235 aa13.25□□□□□ -0.29
DDX56-207ENST00000448192 MARCH1Q8TCQ1 289 aa13.25□□□□□ -0.29
DDX56-207ENST00000448192 PINX1Q96BK5 328 aaKnown RBP13.25□□□□□ -0.29
DDX56-207ENST00000448192 C5orf66Q9H5L9 145 aa13.25□□□□□ -0.29
DDX56-207ENST00000448192 GAR1Q9NY12 217 aaKnown RBP13.25□□□□□ -0.29
DDX56-207ENST00000448192 I3L2K1 104 aa13.24□□□□□ -0.29
DDX56-207ENST00000448192 NUPL2O15504 423 aaKnown RBP13.24□□□□□ -0.29
DDX56-207ENST00000448192 ATG12O94817 140 aa13.24□□□□□ -0.29
DDX56-207ENST00000448192 MT-CO2P00403 227 aa13.24□□□□□ -0.29
DDX56-207ENST00000448192 IFNA17P01571 189 aa13.24□□□□□ -0.29
DDX56-207ENST00000448192 IGHV3-48P01763 117 aa13.24□□□□□ -0.29
DDX56-207ENST00000448192 MRPS10P82664 201 aaKnown RBP13.24□□□□□ -0.29
DDX56-207ENST00000448192 LAMTOR1Q6IAA8 161 aa13.24□□□□□ -0.29
DDX56-207ENST00000448192 FAAP20Q6NZ36 180 aa13.24□□□□□ -0.29
DDX56-207ENST00000448192 ZNF114Q8NC26 417 aa13.24□□□□□ -0.29
DDX56-207ENST00000448192 RAB2BQ8WUD1 216 aa13.24□□□□□ -0.29
DDX56-207ENST00000448192 DIRAS2Q96HU8 199 aa13.24□□□□□ -0.29
DDX56-207ENST00000448192 STARD9Q9P2P6 4700 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms