RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 RHOBP62745 196 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 ZNF90Q03938 601 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 TMEM249Q2WGJ8 235 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 ZNF788Q6ZQV5 615 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 CISD2Q8N5K1 135 aaKnown RBP7.68□□□□□ -1.18
KLHL3-202ENST00000447439 OR10G8Q8NGN5 311 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 FAM222BQ8WU58 562 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 NEUROG1Q92886 237 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 ZNF503Q96F45 646 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 NABP2Q9BQ15 211 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 RNASE7Q9H1E1 156 aaKnown RBP7.68□□□□□ -1.18
KLHL3-202ENST00000447439 IGHV3-72A0A0B4J1Y9 119 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 A8MXE2 369 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 UPK2O00526 184 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 RNF224P0DH78 156 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 PRB4P10163 310 aaPredicted RBP7.68□□□□□ -1.18
KLHL3-202ENST00000447439 IRF2P14316 349 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 KIR2DS2P43631 304 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 SELENOVP59797 346 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 PKIAP61925 76 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 PRR20EP86478 221 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 PRR20CP86479 221 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 PRR20DP86480 221 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 PRR20BP86481 221 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 PRR20AP86496 221 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 SSX2Q16385 188 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 LINC00479Q96M42 142 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 IL19Q9UHD0 177 aa7.68□□□□□ -1.18
KLHL3-202ENST00000447439 ZNF292O60281 2723 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 A0A0G2JNJ9 132 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 DPRXA6NFQ7 191 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 GATCO43716 136 aaKnown RBP7.67□□□□□ -1.18
KLHL3-202ENST00000447439 PLAUP00749 431 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 TYMSP04818 313 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 RUSC1-AS1Q66K80 236 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 PQLC2Q6ZP29 291 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 Q6ZS92 163 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 FAM169BQ8N8A8 192 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 RITA1Q96K30 269 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 HARBI1Q96MB7 349 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 UHRF2Q96PU4 802 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 SLC25A10Q9UBX3 287 aaPredicted RBP7.67□□□□□ -1.18
KLHL3-202ENST00000447439 Q9UFV3 132 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 RPUSD1Q9UJJ7 312 aaKnown RBP7.67□□□□□ -1.18
KLHL3-202ENST00000447439 IGHV3-21A0A0B4J1V1 117 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 TSTD3H0UI37 97 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 SCGB1D1O95968 90 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 CA1P00915 261 aaPredicted RBP7.67□□□□□ -1.18
KLHL3-202ENST00000447439 IER3P46695 156 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 ERVFC1-1P60608 527 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 BSPH1Q075Z2 132 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 ADIPOQQ15848 244 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 KRTCAP3Q53RY4 240 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 PRR30Q53SZ7 412 aaPredicted RBP7.67□□□□□ -1.18
KLHL3-202ENST00000447439 CENPWQ5EE01 88 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 SLC25A48Q6ZT89 311 aaKnown RBP7.67□□□□□ -1.18
KLHL3-202ENST00000447439 GBGT1Q8N5D6 347 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 TPSG1Q9NRR2 321 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 SLC45A2Q9UMX9 530 aa7.67□□□□□ -1.18
KLHL3-202ENST00000447439 DYSFO75923 2080 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 TACC2O95359 2948 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 GGTLC3B5MD39 225 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 GATA4P43694 442 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 RPL29P47914 159 aaKnown RBP7.66□□□□□ -1.18
KLHL3-202ENST00000447439 PRCDQ00LT1 54 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 KIAA1644Q3SXP7 199 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 COA6Q5JTJ3 125 aaKnown RBP7.66□□□□□ -1.18
KLHL3-202ENST00000447439 OR8I2Q8N0Y5 310 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 EAF1Q96JC9 268 aaPredicted RBP7.66□□□□□ -1.18
KLHL3-202ENST00000447439 TP53TG3Q9ULZ0 132 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 RNASE2P10153 161 aaKnown RBP7.66□□□□□ -1.18
KLHL3-202ENST00000447439 BTF3P20290 206 aaKnown RBP7.66□□□□□ -1.18
KLHL3-202ENST00000447439 TNFSF4P23510 183 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 PDLIM4P50479 330 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 SUMO1P63165 101 aaKnown RBP7.66□□□□□ -1.18
KLHL3-202ENST00000447439 RAB31Q13636 194 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 RTL8BQ17RB0 113 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 TMEM200BQ69YZ2 307 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 OR1L6Q8NGR2 347 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 OR5R1Q8NH85 324 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 IGFBPL1Q8WX77 278 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 SGK494Q96LW2 274 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 MRPL36Q9P0J6 103 aaKnown RBP7.66□□□□□ -1.18
KLHL3-202ENST00000447439 PRNDQ9UKY0 176 aa7.66□□□□□ -1.18
KLHL3-202ENST00000447439 PYYP10082 97 aa7.65□□□□□ -1.18
KLHL3-202ENST00000447439 MGST1P10620 155 aaKnown RBP7.65□□□□□ -1.18
KLHL3-202ENST00000447439 LCN2P80188 198 aa7.65□□□□□ -1.18
KLHL3-202ENST00000447439 DMRTC2Q8IXT2 367 aaPredicted RBP7.65□□□□□ -1.18
KLHL3-202ENST00000447439 TMEM18Q96B42 140 aa7.65□□□□□ -1.18
KLHL3-202ENST00000447439 SVEP1Q4LDE5 3571 aa7.65□□□□□ -1.18
KLHL3-202ENST00000447439 POLEQ07864 2286 aa7.65□□□□□ -1.18
KLHL3-202ENST00000447439 hADV38S2A0JD32 116 aa7.65□□□□□ -1.18
KLHL3-202ENST00000447439 THBDP07204 575 aa7.65□□□□□ -1.18
KLHL3-202ENST00000447439 CD99P14209 185 aa7.65□□□□□ -1.18
KLHL3-202ENST00000447439 LINC00310P59036 64 aa7.65□□□□□ -1.18
KLHL3-202ENST00000447439 FOXL1Q12952 345 aa7.65□□□□□ -1.18
KLHL3-202ENST00000447439 FAM57AQ8TBR7 257 aa7.65□□□□□ -1.18
KLHL3-202ENST00000447439 RNASEH2CQ8TDP1 164 aaKnown RBP7.65□□□□□ -1.18
KLHL3-202ENST00000447439 MISP3Q96FF7 219 aa7.65□□□□□ -1.18
KLHL3-202ENST00000447439 TXNDC17Q9BRA2 123 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms