RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 GPR107Q5VW38 600 aa15.53■□□□□ 0.08
SDC1-205ENST00000447124 MZT2AQ6P582 158 aa15.53■□□□□ 0.08
SDC1-205ENST00000447124 SLC38A6Q8IZM9 456 aa15.53■□□□□ 0.08
SDC1-205ENST00000447124 OR5B3Q8NH48 314 aa15.53■□□□□ 0.08
SDC1-205ENST00000447124 OR52I2Q8NH67 350 aa15.53■□□□□ 0.08
SDC1-205ENST00000447124 ISOC1Q96CN7 298 aa15.53■□□□□ 0.08
SDC1-205ENST00000447124 ABHD1Q96SE0 405 aa15.53■□□□□ 0.08
SDC1-205ENST00000447124 LYSTQ99698 3801 aa15.53■□□□□ 0.08
SDC1-205ENST00000447124 FAM110AQ9BQ89 295 aa15.53■□□□□ 0.08
SDC1-205ENST00000447124 FKBP11Q9NYL4 201 aa15.53■□□□□ 0.08
SDC1-205ENST00000447124 C15orf61A6NNL5 157 aa15.52■□□□□ 0.08
SDC1-205ENST00000447124 CYB5BO43169 146 aa15.52■□□□□ 0.08
SDC1-205ENST00000447124 LHFPL1Q86WI0 220 aa15.52■□□□□ 0.08
SDC1-205ENST00000447124 TMEM190Q8WZ59 177 aa15.52■□□□□ 0.08
SDC1-205ENST00000447124 MARC2Q969Z3 335 aa15.52■□□□□ 0.08
SDC1-205ENST00000447124 C21orf62Q9NYP8 219 aa15.52■□□□□ 0.08
SDC1-205ENST00000447124 UFC1Q9Y3C8 167 aa15.52■□□□□ 0.08
SDC1-205ENST00000447124 DNAH1Q9P2D7 4330 aa15.52■□□□□ 0.07
SDC1-205ENST00000447124 CD3DP04234 171 aa15.51■□□□□ 0.07
SDC1-205ENST00000447124 PI3P19957 117 aa15.51■□□□□ 0.07
SDC1-205ENST00000447124 IZUMO4Q1ZYL8 232 aa15.51■□□□□ 0.07
SDC1-205ENST00000447124 OR2C3Q8N628 320 aa15.51■□□□□ 0.07
SDC1-205ENST00000447124 OR52B4Q8NGK2 314 aa15.51■□□□□ 0.07
SDC1-205ENST00000447124 MRGPRFQ96AM1 343 aa15.51■□□□□ 0.07
SDC1-205ENST00000447124 BSCL2Q96G97 398 aaPredicted RBP15.51■□□□□ 0.07
SDC1-205ENST00000447124 TMEM56Q96MV1 263 aa15.51■□□□□ 0.07
SDC1-205ENST00000447124 TSC22D3Q99576 134 aa15.51■□□□□ 0.07
SDC1-205ENST00000447124 EXTL2Q9UBQ6 330 aa15.51■□□□□ 0.07
SDC1-205ENST00000447124 MTFP1Q9UDX5 166 aa15.51■□□□□ 0.07
SDC1-205ENST00000447124 PLECQ15149 4684 aaKnown RBP15.51■□□□□ 0.07
SDC1-205ENST00000447124 TRAV25A0A0B4J276 109 aa15.5■□□□□ 0.07
SDC1-205ENST00000447124 S100GP29377 79 aa15.5■□□□□ 0.07
SDC1-205ENST00000447124 SLC16A13Q7RTY0 426 aa15.5■□□□□ 0.07
SDC1-205ENST00000447124 H2BFWTQ7Z2G1 175 aa15.5■□□□□ 0.07
SDC1-205ENST00000447124 OR1P1Q8NH06 330 aa15.5■□□□□ 0.07
SDC1-205ENST00000447124 ATP6V0BQ99437 205 aa15.5■□□□□ 0.07
SDC1-205ENST00000447124 MIXL1Q9H2W2 232 aa15.5■□□□□ 0.07
SDC1-205ENST00000447124 IGHV3OR16-8A0A075B7F1 116 aa15.49■□□□□ 0.07
SDC1-205ENST00000447124 CTSGP08311 255 aa15.49■□□□□ 0.07
SDC1-205ENST00000447124 ALDH3B2P48448 385 aa15.49■□□□□ 0.07
SDC1-205ENST00000447124 RND3P61587 244 aa15.49■□□□□ 0.07
SDC1-205ENST00000447124 SPSB3Q6PJ21 355 aa15.49■□□□□ 0.07
SDC1-205ENST00000447124 OR4D10Q8NGI6 311 aa15.49■□□□□ 0.07
SDC1-205ENST00000447124 OR4A16Q8NH70 328 aa15.49■□□□□ 0.07
SDC1-205ENST00000447124 AP3S1Q92572 193 aa15.49■□□□□ 0.07
SDC1-205ENST00000447124 C5orf66Q9H5L9 145 aa15.49■□□□□ 0.07
SDC1-205ENST00000447124 I3L2K1 104 aa15.48■□□□□ 0.07
SDC1-205ENST00000447124 NDUFA4O00483 81 aa15.48■□□□□ 0.07
SDC1-205ENST00000447124 IGKV1-5P01602 117 aa15.48■□□□□ 0.07
SDC1-205ENST00000447124 PGAM2P15259 253 aa15.48■□□□□ 0.07
SDC1-205ENST00000447124 HSPE1P61604 102 aaKnown RBP15.48■□□□□ 0.07
SDC1-205ENST00000447124 RNASE10Q5GAN6 216 aaKnown RBP15.48■□□□□ 0.07
SDC1-205ENST00000447124 RBPMS2Q6ZRY4 209 aaKnown RBP15.48■□□□□ 0.07
SDC1-205ENST00000447124 OR1L6Q8NGR2 347 aa15.48■□□□□ 0.07
SDC1-205ENST00000447124 TP53RKQ96S44 253 aa15.48■□□□□ 0.07
SDC1-205ENST00000447124 CTDSP2O14595 271 aa15.47■□□□□ 0.07
SDC1-205ENST00000447124 ZNF207O43670 478 aaKnown RBP15.47■□□□□ 0.07
SDC1-205ENST00000447124 P0C879 139 aa15.47■□□□□ 0.07
SDC1-205ENST00000447124 PIGPP57054 158 aa15.47■□□□□ 0.07
SDC1-205ENST00000447124 PRCDQ00LT1 54 aa15.47■□□□□ 0.07
SDC1-205ENST00000447124 ANKRD55Q3KP44 614 aa15.47■□□□□ 0.07
SDC1-205ENST00000447124 Q56UQ5 140 aa15.47■□□□□ 0.07
SDC1-205ENST00000447124 UBAC2Q8NBM4 344 aa15.47■□□□□ 0.07
SDC1-205ENST00000447124 C20orf24Q9BUV8 137 aa15.47■□□□□ 0.07
SDC1-205ENST00000447124 HYDINQ4G0P3 5121 aa15.47■□□□□ 0.07
SDC1-205ENST00000447124 A0A0B4J293 547 aa15.46■□□□□ 0.07
SDC1-205ENST00000447124 K7EMT4 169 aa15.46■□□□□ 0.07
SDC1-205ENST00000447124 IGHV3-48P01763 117 aa15.46■□□□□ 0.07
SDC1-205ENST00000447124 CD74P04233 296 aa15.46■□□□□ 0.07
SDC1-205ENST00000447124 SPCS2Q15005 226 aa15.46■□□□□ 0.07
SDC1-205ENST00000447124 ARRDC1Q8N5I2 433 aa15.46■□□□□ 0.07
SDC1-205ENST00000447124 TMEM229BQ8NBD8 167 aa15.46■□□□□ 0.07
SDC1-205ENST00000447124 MISP3Q96FF7 219 aa15.46■□□□□ 0.07
SDC1-205ENST00000447124 ZNF486Q96H40 463 aaPredicted RBP15.46■□□□□ 0.07
SDC1-205ENST00000447124 DAZ1Q9NQZ3 744 aaKnown RBP15.46■□□□□ 0.07
SDC1-205ENST00000447124 LCE6AA0A183 80 aa15.45■□□□□ 0.06
SDC1-205ENST00000447124 TSPAN4O14817 238 aa15.45■□□□□ 0.06
SDC1-205ENST00000447124 MT-CO2P00403 227 aa15.45■□□□□ 0.06
SDC1-205ENST00000447124 SP6Q3SY56 376 aa15.45■□□□□ 0.06
SDC1-205ENST00000447124 SPINK9Q5DT21 86 aa15.45■□□□□ 0.06
SDC1-205ENST00000447124 ZNF114Q8NC26 417 aa15.45■□□□□ 0.06
SDC1-205ENST00000447124 TERB2Q8NHR7 220 aa15.45■□□□□ 0.06
SDC1-205ENST00000447124 MRPS26Q9BYN8 205 aaKnown RBP15.45■□□□□ 0.06
SDC1-205ENST00000447124 FCGR2BP31994 310 aaPredicted RBP15.44■□□□□ 0.06
SDC1-205ENST00000447124 PPP5CP53041 499 aa15.44■□□□□ 0.06
SDC1-205ENST00000447124 MFAP4P55083 255 aa15.44■□□□□ 0.06
SDC1-205ENST00000447124 GPR141Q7Z602 305 aa15.44■□□□□ 0.06
SDC1-205ENST00000447124 SPAG8Q99932 426 aaPredicted RBP15.44■□□□□ 0.06
SDC1-205ENST00000447124 GGTLC1Q9BX51 225 aa15.44■□□□□ 0.06
SDC1-205ENST00000447124 UBQLN2Q9UHD9 624 aa15.44■□□□□ 0.06
SDC1-205ENST00000447124 LOC102724200A0A096LPH7 203 aaPredicted RBP15.43■□□□□ 0.06
SDC1-205ENST00000447124 C3orf85A0A1B0GTC6 90 aa15.43■□□□□ 0.06
SDC1-205ENST00000447124 TBPP20226 339 aa15.43■□□□□ 0.06
SDC1-205ENST00000447124 ERHP84090 104 aaKnown RBP15.43■□□□□ 0.06
SDC1-205ENST00000447124 OVOL2Q9BRP0 275 aa15.43■□□□□ 0.06
SDC1-205ENST00000447124 SMPXQ9UHP9 88 aa15.43■□□□□ 0.06
SDC1-205ENST00000447124 A0A0G2JRQ6 117 aa15.42■□□□□ 0.06
SDC1-205ENST00000447124 C15orf62A8K5M9 175 aa15.42■□□□□ 0.06
SDC1-205ENST00000447124 GABARAPH6UMI1 98 aa15.42■□□□□ 0.06
SDC1-205ENST00000447124 RAB3DO95716 219 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms