RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 OR4P4Q8NGL7 312 aa13.42□□□□□ -0.26
CLCNKA-203ENST00000439316 HEATR1Q9H583 2144 aaKnown RBP13.42□□□□□ -0.26
CLCNKA-203ENST00000439316 DSCAML1Q8TD84 2053 aa13.42□□□□□ -0.26
CLCNKA-203ENST00000439316 PKD1L2Q7Z442 2459 aa13.42□□□□□ -0.26
CLCNKA-203ENST00000439316 M0R1B8 84 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 SPRY3O43610 288 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 GLRXP35754 106 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 GATA4P43694 442 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 ZNF90Q03938 601 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 FAM201AQ5SY85 155 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 GFRALQ6UXV0 394 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 CORO2AQ92828 525 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 EAF1Q96JC9 268 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 OR51B2Q9Y5P1 312 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 IGLV3-9A0A075B6K5 115 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 MYOD1P15172 320 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 COL8A2P25067 703 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 MIR17HGQ75NE6 70 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 LYG1Q8N1E2 194 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 FAM122AQ96E09 287 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 NAGKQ9UJ70 344 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 PRNDQ9UKY0 176 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 TP53TG3Q9ULZ0 132 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 SLC45A2Q9UMX9 530 aa13.41□□□□□ -0.26
CLCNKA-203ENST00000439316 KIR2DL5BA0A0G2JN68 375 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 KIR2DL5BA0A0G2JPC4 375 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 SLC17A3O00476 420 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 PRRG2O14669 202 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 SCGB1D1O95968 90 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 CBLN1P23435 193 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 LGALS4P56470 323 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 TIMM23BQ5SRD1 257 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 STUMQ69YW2 141 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 DUX4L9Q6RFH8 374 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 DOLPP1Q86YN1 238 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 DMRTC2Q8IXT2 367 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 KIR2DL5AQ8N109 375 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 CMTM2Q8TAZ6 248 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 MS4A10Q96PG2 267 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 ZNF257Q9Y2Q1 563 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 POLR3KQ9Y2Y1 108 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 TANC2Q9HCD6 1990 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 ACACBO00763 2458 aa13.4□□□□□ -0.26
CLCNKA-203ENST00000439316 ESDP10768 282 aa13.4□□□□□ -0.27
CLCNKA-203ENST00000439316 PRCDQ00LT1 54 aa13.4□□□□□ -0.27
CLCNKA-203ENST00000439316 C3orf36Q3SXR2 165 aa13.4□□□□□ -0.27
CLCNKA-203ENST00000439316 C1orf194Q5T5A4 169 aa13.4□□□□□ -0.27
CLCNKA-203ENST00000439316 LINC00574Q9H8X3 128 aa13.4□□□□□ -0.27
CLCNKA-203ENST00000439316 POLEQ07864 2286 aa13.39□□□□□ -0.27
CLCNKA-203ENST00000439316 DSCAMO60469 2012 aa13.39□□□□□ -0.27
CLCNKA-203ENST00000439316 GRIFINA4D1Z8 144 aa13.39□□□□□ -0.27
CLCNKA-203ENST00000439316 A8MXE2 369 aa13.39□□□□□ -0.27
CLCNKA-203ENST00000439316 UPK2O00526 184 aa13.39□□□□□ -0.27
CLCNKA-203ENST00000439316 OR10J1P30954 320 aa13.39□□□□□ -0.27
CLCNKA-203ENST00000439316 LINC00310P59036 64 aa13.39□□□□□ -0.27
CLCNKA-203ENST00000439316 ZNF474Q6S9Z5 364 aaPredicted RBP13.39□□□□□ -0.27
CLCNKA-203ENST00000439316 GAFA1Q96PS6 74 aa13.39□□□□□ -0.27
CLCNKA-203ENST00000439316 MRPL18Q9H0U6 180 aaKnown RBP13.39□□□□□ -0.27
CLCNKA-203ENST00000439316 PLEKHA3Q9HB20 300 aa13.39□□□□□ -0.27
CLCNKA-203ENST00000439316 TMEM167BQ9NRX6 74 aa13.39□□□□□ -0.27
CLCNKA-203ENST00000439316 RNF7Q9UBF6 113 aa13.39□□□□□ -0.27
CLCNKA-203ENST00000439316 V9GYV3 84 aa13.39□□□□□ -0.27
CLCNKA-203ENST00000439316 EREGO14944 169 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 CEACAM8P31997 349 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 RPEL1Q2QD12 228 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 ALKBH2Q6NS38 261 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 OR1L6Q8NGR2 347 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 SLC35E1Q96K37 410 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 NABP2Q9BQ15 211 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 HINT2Q9BX68 163 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 SH3BGRL2Q9UJC5 107 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 COL6A6A6NMZ7 2263 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 J3QR06 171 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 OR10J4P0C629 311 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 PSG5Q15238 335 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 USF2Q15853 346 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 TMEM30BQ3MIR4 351 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 VHLLQ6RSH7 139 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 MMD2Q8IY49 270 aa13.38□□□□□ -0.27
CLCNKA-203ENST00000439316 RAI1Q7Z5J4 1906 aaPredicted RBP13.37□□□□□ -0.27
CLCNKA-203ENST00000439316 ACTL6BO94805 426 aa13.37□□□□□ -0.27
CLCNKA-203ENST00000439316 GNG10P50151 68 aa13.37□□□□□ -0.27
CLCNKA-203ENST00000439316 TPPP2P59282 170 aa13.37□□□□□ -0.27
CLCNKA-203ENST00000439316 ERVFC1-1P60608 527 aa13.37□□□□□ -0.27
CLCNKA-203ENST00000439316 PAFAH1B2P68402 229 aa13.37□□□□□ -0.27
CLCNKA-203ENST00000439316 CENPWQ5EE01 88 aa13.37□□□□□ -0.27
CLCNKA-203ENST00000439316 ZNF503Q96F45 646 aa13.37□□□□□ -0.27
CLCNKA-203ENST00000439316 GCM1Q9NP62 436 aa13.37□□□□□ -0.27
CLCNKA-203ENST00000439316 TECRQ9NZ01 308 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-203ENST00000439316 ZNF835Q9Y2P0 537 aa13.37□□□□□ -0.27
CLCNKA-203ENST00000439316 RELNP78509 3460 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 IGKV1OR2-108A0A075B7D4 117 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 TRBV9A0A0B4J1U6 114 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 CT45A6P0DMU7 189 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 CT45A5P0DMU8 189 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 CT45A7P0DMV0 189 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 CRISP2P16562 243 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 ATP5IP56385 69 aaPredicted RBP13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 KLRB1Q12918 225 aa13.36□□□□□ -0.27
CLCNKA-203ENST00000439316 SLC25A48Q6ZT89 311 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms