RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 CGAP01215 116 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 CRYGSP22914 178 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 OR4P4Q8NGL7 312 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 HSPB8Q9UJY1 196 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 THADAQ6YHU6 1953 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 SLC25A34Q6PIV7 304 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 SYNGR3O43761 229 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 LYZL6O75951 148 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 OR8B3Q8NGG8 313 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 NDFIP1Q9BT67 221 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 PRRC2CQ9Y520 2896 aaKnown RBP6.23□□□□□ -1.41
CPSF6-202ENST00000435070 FGF12P61328 243 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 RPL30P62888 115 aaKnown RBP6.23□□□□□ -1.41
CPSF6-202ENST00000435070 FOXE3Q13461 319 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 TIGITQ495A1 244 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 OR10J3Q5JRS4 329 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 SVIPQ8NHG7 77 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.23□□□□□ -1.41
CPSF6-202ENST00000435070 HS3ST3A1Q9Y663 406 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 EML6Q6ZMW3 1958 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 LINC01565O15544 149 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 CX3CL1P78423 397 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 FAM27BQ5VT28 67 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 SSX8Q7RTT4 187 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 DEFB125Q8N687 156 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 FAM168AQ92567 244 aa6.23□□□□□ -1.41
CPSF6-202ENST00000435070 FGF23Q9GZV9 251 aaPredicted RBP6.23□□□□□ -1.41
CPSF6-202ENST00000435070 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 IGLV2-14P01704 120 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 LINC00869P0C866 280 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 CEACAM16Q2WEN9 425 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 FOXC2Q99958 501 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 HILPDAQ9Y5L2 63 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 TNCP24821 2201 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 C7orf71A4D174 169 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 H7C2G1 150 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 M0R3E3 92 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 ISLRO14498 428 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 SRD5A2P31213 254 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 CLDN18P56856 261 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 CCL7P80098 99 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 KLF13Q9Y2Y9 288 aaPredicted RBP6.22□□□□□ -1.41
CPSF6-202ENST00000435070 ICE1Q9Y2F5 2266 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 SPTY2D1-AS1A0A0U1RR47 76 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 PMS2P5A8MQ11 134 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 H0YJW9 148 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 SUMO3P55854 103 aaPredicted RBP6.22□□□□□ -1.41
CPSF6-202ENST00000435070 PAX2Q02962 417 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 TMEM42Q69YG0 159 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 ZNF784Q8NCA9 323 aaPredicted RBP6.22□□□□□ -1.41
CPSF6-202ENST00000435070 PRDM6Q9NQX0 595 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 C17orf98A8MV24 154 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 MT-ND6P03923 174 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 GCHFRP30047 84 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 NTF4P34130 210 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 BPIFA4PQ86YQ2 179 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 DEFB124Q8NES8 71 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 ANAPC13Q9BS18 74 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 EYSQ5T1H1 3165 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 TRAV24A0A0B4J272 114 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 C19orf67A6NJJ6 358 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 H3BUT2 72 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 CKS1BP61024 79 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 SPATA46Q5T0L3 261 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 UBALD2Q8IYN6 164 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 PRR7Q8TB68 274 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 LRRC29Q8WV35 223 aa6.22□□□□□ -1.41
CPSF6-202ENST00000435070 PHF7Q9BWX1 381 aaPredicted RBP6.22□□□□□ -1.41
CPSF6-202ENST00000435070 MRPL27Q9P0M9 148 aaKnown RBP6.22□□□□□ -1.41
CPSF6-202ENST00000435070 M0R296 226 aa6.21□□□□□ -1.41
CPSF6-202ENST00000435070 CXorf1O96002 111 aa6.21□□□□□ -1.41
CPSF6-202ENST00000435070 SLC35E4Q6ICL7 350 aa6.21□□□□□ -1.41
CPSF6-202ENST00000435070 FAM71F2Q6NXP2 309 aa6.21□□□□□ -1.41
CPSF6-202ENST00000435070 TRAT1Q6PIZ9 186 aa6.21□□□□□ -1.41
CPSF6-202ENST00000435070 SPACA3Q8IXA5 215 aa6.21□□□□□ -1.41
CPSF6-202ENST00000435070 TMEM70Q9BUB7 260 aa6.21□□□□□ -1.41
CPSF6-202ENST00000435070 COL25A1Q9BXS0 654 aaPredicted RBP6.21□□□□□ -1.41
CPSF6-202ENST00000435070 DLL3Q9NYJ7 618 aa6.21□□□□□ -1.41
CPSF6-202ENST00000435070 HLA-DQA1P01909 254 aa6.21□□□□□ -1.41
CPSF6-202ENST00000435070 RBP4P02753 201 aa6.21□□□□□ -1.41
CPSF6-202ENST00000435070 AMY1AP04745 511 aa6.21□□□□□ -1.41
CPSF6-202ENST00000435070 MFAP4P55083 255 aa6.21□□□□□ -1.41
CPSF6-202ENST00000435070 C12orf54Q6X4T0 127 aa6.21□□□□□ -1.41
CPSF6-202ENST00000435070 CXorf67Q86X51 503 aaPredicted RBP6.21□□□□□ -1.41
CPSF6-202ENST00000435070 CT55Q8WUE5 264 aa6.21□□□□□ -1.41
CPSF6-202ENST00000435070 SPTBN5Q9NRC6 3674 aaKnown RBP6.21□□□□□ -1.41
CPSF6-202ENST00000435070 IGHV3-13P01766 116 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 IGHV3-7P01780 117 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 FTH1P19P0C7X4 201 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 PSG5Q15238 335 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 C10orf128Q5T292 105 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 ABHD12Q8N2K0 398 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 WFDC12Q8WWY7 111 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 LINC00479Q96M42 142 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 TMEM191AQ9H0A3 160 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 PEF1Q9UBV8 284 aaKnown RBP6.21□□□□□ -1.42
CPSF6-202ENST00000435070 DNAJC13O75165 2243 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 DEFB108AA8MXU0 73 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 C2CD4DB7Z1M9 353 aa6.21□□□□□ -1.42
CPSF6-202ENST00000435070 IGLC1P0CG04 106 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms