RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 SPINK4O60575 86 aa9.94□□□□□ -0.82
CLDN4-203ENST00000435050 RPL27AP46776 148 aaKnown RBP9.94□□□□□ -0.82
CLDN4-203ENST00000435050 RND2P52198 227 aa9.94□□□□□ -0.82
CLDN4-203ENST00000435050 S100A12P80511 92 aa9.94□□□□□ -0.82
CLDN4-203ENST00000435050 ST6GALNAC3Q8NDV1 305 aa9.94□□□□□ -0.82
CLDN4-203ENST00000435050 TMEM133Q9H2Q1 129 aa9.94□□□□□ -0.82
CLDN4-203ENST00000435050 MANBALQ9NQG1 85 aa9.94□□□□□ -0.82
CLDN4-203ENST00000435050 NAT8Q9UHE5 227 aa9.94□□□□□ -0.82
CLDN4-203ENST00000435050 S4R3C0 116 aa9.94□□□□□ -0.82
CLDN4-203ENST00000435050 LAMA5O15230 3695 aa9.94□□□□□ -0.82
CLDN4-203ENST00000435050 ADGRG4Q8IZF6 3080 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 TEX50A0A1B0GTY4 177 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 NDUFS6O75380 124 aaKnown RBP9.93□□□□□ -0.82
CLDN4-203ENST00000435050 IGHV1-8P0DP01 117 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 GNLYP22749 145 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 LOXP28300 417 aaPredicted RBP9.93□□□□□ -0.82
CLDN4-203ENST00000435050 OR1B1Q8NGR6 318 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 OSR1Q8TAX0 266 aaPredicted RBP9.93□□□□□ -0.82
CLDN4-203ENST00000435050 FAM210BQ96KR6 192 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 SMDT1Q9H4I9 107 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 USF1P22415 310 aaPredicted RBP9.93□□□□□ -0.82
CLDN4-203ENST00000435050 TEX36Q5VZQ5 186 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 OR4X1Q8NH49 305 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 MALSU1Q96EH3 234 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 A0A1W2PN81 502 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 PPP5D1E7EU14 171 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 MOSP00540 346 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 KLRD1Q13241 179 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 SPATA31B1PQ5VZV4 182 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 ZNF835Q9Y2P0 537 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 HCFC1P51610 2035 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 PGPEP1LA6NFU8 196 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 LINC00869P0C866 280 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 TAS2R45P59539 299 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 LCN2P80188 198 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 FAM222BQ8WU58 562 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 NABP2Q9BQ15 211 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 TIMM9Q9Y5J7 89 aa9.93□□□□□ -0.82
CLDN4-203ENST00000435050 H3BTX0 84 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 NDUFS7O75251 213 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 MPDU1O75352 247 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 LIPFP07098 398 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 MC5RP33032 325 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 GALR1P47211 349 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 UQCRFS1P47985 274 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 UBE2L3P68036 154 aaKnown RBP9.92□□□□□ -0.82
CLDN4-203ENST00000435050 PRR27Q6MZM9 219 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 C16orf82Q7Z2V1 217 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 FAM103A1Q9BTL3 118 aaKnown RBP9.92□□□□□ -0.82
CLDN4-203ENST00000435050 GGTLC1Q9BX51 225 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 H0YJW9 148 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 YIF1AO95070 293 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 SUMO1P63165 101 aaKnown RBP9.92□□□□□ -0.82
CLDN4-203ENST00000435050 C9orf152Q5JTZ5 239 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 TCF23Q7RTU1 214 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 ZNF596Q8TC21 504 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 MGST2Q99735 147 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 ZNF430Q9H8G1 570 aaPredicted RBP9.92□□□□□ -0.82
CLDN4-203ENST00000435050 LOC105371242A0A075B767 164 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 IGHV3OR16-10A0A075B7F0 116 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 CXorf1O96002 111 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 ATMQ13315 3056 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 MIR17HGQ75NE6 70 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 SLC16A13Q7RTY0 426 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 OR5B3Q8NH48 314 aa9.92□□□□□ -0.82
CLDN4-203ENST00000435050 SPNS3Q6ZMD2 512 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 MBD3L1Q8WWY6 194 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 TMEM37Q8WXS4 190 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 MIOXQ9UGB7 285 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 AMMECR1Q9Y4X0 333 aaPredicted RBP9.91□□□□□ -0.82
CLDN4-203ENST00000435050 IGHV2-26A0A0B4J1V2 119 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 RNF224P0DH78 156 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 PRB4P10163 310 aaPredicted RBP9.91□□□□□ -0.82
CLDN4-203ENST00000435050 HTR1DP28221 377 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 CDSNQ15517 529 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 KCNIP4Q6PIL6 250 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 C19orf35Q6ZS72 473 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 SLC45A2Q9UMX9 530 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 ZNF320A2RRD8 509 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 COLCA2A8K830 154 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 BPIFB3P59826 476 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 LYZP61626 148 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 PRCDQ00LT1 54 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 PNRC1Q12796 327 aaPredicted RBP9.91□□□□□ -0.82
CLDN4-203ENST00000435050 SEPSECSQ9HD40 501 aaKnown RBP9.91□□□□□ -0.82
CLDN4-203ENST00000435050 TPSG1Q9NRR2 321 aa9.91□□□□□ -0.82
CLDN4-203ENST00000435050 TRGC2P03986 189 aa9.9□□□□□ -0.82
CLDN4-203ENST00000435050 CNTFRP26992 372 aa9.9□□□□□ -0.82
CLDN4-203ENST00000435050 ADORA2A-AS1P86434 159 aa9.9□□□□□ -0.82
CLDN4-203ENST00000435050 SGK494Q96LW2 274 aa9.9□□□□□ -0.82
CLDN4-203ENST00000435050 VDAC2P45880 294 aaPredicted RBP9.9□□□□□ -0.82
CLDN4-203ENST00000435050 FAM3BP58499 235 aaPredicted RBP9.9□□□□□ -0.82
CLDN4-203ENST00000435050 TMEM30BQ3MIR4 351 aa9.9□□□□□ -0.82
CLDN4-203ENST00000435050 ARSJQ5FYB0 599 aaPredicted RBP9.9□□□□□ -0.82
CLDN4-203ENST00000435050 PDPNQ86YL7 162 aa9.9□□□□□ -0.82
CLDN4-203ENST00000435050 CBLN4Q9NTU7 201 aa9.9□□□□□ -0.82
CLDN4-203ENST00000435050 TECRQ9NZ01 308 aaKnown RBP9.9□□□□□ -0.82
CLDN4-203ENST00000435050 FOXA2Q9Y261 457 aaPredicted RBP9.9□□□□□ -0.82
CLDN4-203ENST00000435050 TRBV23-1A0A0A0MS06 115 aa9.9□□□□□ -0.82
CLDN4-203ENST00000435050 LYPD6BQ8NI32 183 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms