RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 OR10J1P30954 320 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 RANP62826 216 aaKnown RBP9.26□□□□□ -0.93
USP4-205ENST00000431357 SPATA31B1PQ5VZV4 182 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 STUMQ69YW2 141 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 SEM1Q6ZVN7 128 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 ORAOV1Q8WV07 137 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 EAF1Q96JC9 268 aaPredicted RBP9.26□□□□□ -0.93
USP4-205ENST00000431357 TECRQ9NZ01 308 aaKnown RBP9.26□□□□□ -0.93
USP4-205ENST00000431357 IL19Q9UHD0 177 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 RPH3ALQ9UNE2 315 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 CEACAM4O75871 244 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 SCGB1D1O95968 90 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 ESDP10768 282 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 SRSF6Q13247 344 aaKnown RBP9.26□□□□□ -0.93
USP4-205ENST00000431357 RPEL1Q2QD12 228 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 COX19Q49B96 90 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 C2orf83Q53S99 150 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 SPRNQ5BIV9 151 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 ZADH2Q8N4Q0 377 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 CMTM2Q8TAZ6 248 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 LEAP2Q969E1 77 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 MS4A10Q96PG2 267 aa9.26□□□□□ -0.93
USP4-205ENST00000431357 K7EN84 100 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 FOXH1O75593 365 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 OR10J4P0C629 311 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 TNFSF4P23510 183 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 LGALS4P56470 323 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 TPPP2P59282 170 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 TAS2R45P59539 299 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 RPS20P60866 119 aaKnown RBP9.25□□□□□ -0.93
USP4-205ENST00000431357 PQLC2Q6ZP29 291 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 TMEM256Q8N2U0 113 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 GAFA1Q96PS6 74 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 NABP2Q9BQ15 211 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 HINT2Q9BX68 163 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 CSTL1Q9H114 145 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 NAGKQ9UJ70 344 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 HELTA6NFD8 242 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 OR4A8P0C604 315 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 IRF2P14316 349 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 ARF6P62330 175 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 TNFAIP6P98066 277 aaPredicted RBP9.25□□□□□ -0.93
USP4-205ENST00000431357 PSG5Q15238 335 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 C1orf185Q5T7R7 199 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 VHLLQ6RSH7 139 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 ZNF474Q6S9Z5 364 aaPredicted RBP9.25□□□□□ -0.93
USP4-205ENST00000431357 ZNF788Q6ZQV5 615 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 SLC25A48Q6ZT89 311 aaKnown RBP9.25□□□□□ -0.93
USP4-205ENST00000431357 MIR17HGQ75NE6 70 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 TCF23Q7RTU1 214 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 OR1L8Q8NGR8 309 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 OR5B3Q8NH48 314 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 ZCCHC14Q8WYQ9 949 aaKnown RBP9.25□□□□□ -0.93
USP4-205ENST00000431357 MRPL18Q9H0U6 180 aaKnown RBP9.25□□□□□ -0.93
USP4-205ENST00000431357 GCM1Q9NP62 436 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 SLC35D1Q9NTN3 355 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 CBLN4Q9NTU7 201 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 BET1LQ9NYM9 111 aa9.25□□□□□ -0.93
USP4-205ENST00000431357 RPUSD1Q9UJJ7 312 aaKnown RBP9.25□□□□□ -0.93
USP4-205ENST00000431357 FREM2Q5SZK8 3169 aa9.24□□□□□ -0.93
USP4-205ENST00000431357 FTH1P19P0C7X4 201 aa9.24□□□□□ -0.93
USP4-205ENST00000431357 CRISP2P16562 243 aa9.24□□□□□ -0.93
USP4-205ENST00000431357 WT1P19544 449 aaPredicted RBP9.24□□□□□ -0.93
USP4-205ENST00000431357 GNG4P50150 75 aa9.24□□□□□ -0.93
USP4-205ENST00000431357 OR5I1Q13606 314 aa9.24□□□□□ -0.93
USP4-205ENST00000431357 DEFB109BQ30KR1 87 aa9.24□□□□□ -0.93
USP4-205ENST00000431357 UTF1Q5T230 341 aa9.24□□□□□ -0.93
USP4-205ENST00000431357 OR1L6Q8NGR2 347 aa9.24□□□□□ -0.93
USP4-205ENST00000431357 RNF2Q99496 336 aa9.24□□□□□ -0.93
USP4-205ENST00000431357 LRFN3Q9BTN0 628 aa9.24□□□□□ -0.93
USP4-205ENST00000431357 OSTCQ9NRP0 149 aa9.24□□□□□ -0.93
USP4-205ENST00000431357 GPR179Q6PRD1 2367 aa9.24□□□□□ -0.93
USP4-205ENST00000431357 TET2Q6N021 2002 aaPredicted RBP9.24□□□□□ -0.93
USP4-205ENST00000431357 TEX50A0A1B0GTY4 177 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 hADV38S2A0JD32 116 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 MT-ND6P03923 174 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 OR5G3P0C626 314 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 CT45A6P0DMU7 189 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 CT45A5P0DMU8 189 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 CT45A7P0DMV0 189 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 Q0VG73 95 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 HLA-DRB5Q30154 266 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 WDR73Q6P4I2 378 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 IGF2-ASQ6U949 168 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 MMD2Q8IY49 270 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 NUDT11Q96G61 164 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 C20orf144Q9BQM9 153 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 GNB1LQ9BYB4 327 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 MRPL32Q9BYC8 188 aaKnown RBP9.23□□□□□ -0.93
USP4-205ENST00000431357 V9GYV3 84 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 VPS13AQ96RL7 3174 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 DMDP11532 3685 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 A0A1W2PRE2 83 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 SLC17A3O00476 420 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 ACTL6BO94805 426 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 IGHV1-46P01743 117 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 CBLN1P23435 193 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 TIGITQ495A1 244 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 FAM201AQ5SY85 155 aa9.23□□□□□ -0.93
USP4-205ENST00000431357 TEX36Q5VZQ5 186 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms