RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 CGB3P0DN86 165 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 CGB7P0DN87 165 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 SRP14P37108 136 aaKnown RBP5.86□□□□□ -1.47
COL28A1-202ENST00000430711 SMIM21Q3B7S5 101 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 AARDQ4LEZ3 155 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 C10orf55Q5SWW7 151 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 INO80CQ6PI98 192 aaPredicted RBP5.86□□□□□ -1.47
COL28A1-202ENST00000430711 CISD2Q8N5K1 135 aaKnown RBP5.86□□□□□ -1.47
COL28A1-202ENST00000430711 OR10G8Q8NGN5 311 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 OR4A16Q8NH70 328 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 ANAPC16Q96DE5 110 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 LURAP1Q96LR2 239 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 C2orf88Q9BSF0 95 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 SCNM1Q9BWG6 230 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 CALYQ9NYX4 217 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 MRPL36Q9P0J6 103 aaKnown RBP5.86□□□□□ -1.47
COL28A1-202ENST00000430711 IGF2RP11717 2491 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 VENTXO95231 258 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 KITLGP21583 273 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 CRYBB3P26998 211 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 OPRK1P41145 380 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 IER3P46695 156 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 REG1BP48304 166 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 TMEM164Q5U3C3 297 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 ZNF474Q6S9Z5 364 aaPredicted RBP5.86□□□□□ -1.47
COL28A1-202ENST00000430711 OR8I2Q8N0Y5 310 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 Q8N976 141 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 ZBTB34Q8NCN2 500 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 IGFBPL1Q8WX77 278 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 SGK494Q96LW2 274 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 TBX15Q96SF7 602 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 ZNF71Q9NQZ8 489 aaPredicted RBP5.86□□□□□ -1.47
COL28A1-202ENST00000430711 KCNIP2Q9NS61 270 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 FKBP11Q9NYL4 201 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 FBXL7Q9UJT9 491 aa5.86□□□□□ -1.47
COL28A1-202ENST00000430711 IGSF10Q6WRI0 2623 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 CEP295Q9C0D2 2601 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 M0R1B8 84 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 SPINT2O43291 252 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 HPRT1P00492 218 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 IGLV2-8P01709 118 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 MBP02144 154 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 RPL29P47914 159 aaKnown RBP5.85□□□□□ -1.47
COL28A1-202ENST00000430711 MRPL49Q13405 166 aaKnown RBP5.85□□□□□ -1.47
COL28A1-202ENST00000430711 MAJINQ3KP22 176 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 TPTE2P1Q5T6R2 138 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 LYG1Q8N1E2 194 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 ACY3Q96HD9 319 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 EAF1Q96JC9 268 aaPredicted RBP5.85□□□□□ -1.47
COL28A1-202ENST00000430711 NEU1Q99519 415 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 CCL13Q99616 98 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 SSBP3Q9BWW4 388 aaPredicted RBP5.85□□□□□ -1.47
COL28A1-202ENST00000430711 V9GYV3 84 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 A0A1W2PN81 502 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 C15orf61A6NNL5 157 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 C17orf112F2Z3M2 114 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 IGHG3P01860 377 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 CD24P25063 80 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 RIPPLY3P57055 190 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 NUTF2P61970 127 aaKnown RBP5.85□□□□□ -1.47
COL28A1-202ENST00000430711 HTD2P86397 168 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 PRR20EP86478 221 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 PRR20CP86479 221 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 PRR20DP86480 221 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 PRR20BP86481 221 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 PRR20AP86496 221 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 PDLIM3Q53GG5 364 aaPredicted RBP5.85□□□□□ -1.47
COL28A1-202ENST00000430711 CENPWQ5EE01 88 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 DNLZQ5SXM8 178 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 Q6ZVH6 145 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 RAB1CQ92928 201 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 RITA1Q96K30 269 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 MS4A10Q96PG2 267 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 UHRF2Q96PU4 802 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 CIB3Q96Q77 187 aaPredicted RBP5.85□□□□□ -1.47
COL28A1-202ENST00000430711 HSPB9Q9BQS6 159 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 FAM103A1Q9BTL3 118 aaKnown RBP5.85□□□□□ -1.47
COL28A1-202ENST00000430711 IER2Q9BTL4 223 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 MRPL18Q9H0U6 180 aaKnown RBP5.85□□□□□ -1.47
COL28A1-202ENST00000430711 NAGKQ9UJ70 344 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 PAM16Q9Y3D7 125 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 SLC25A15Q9Y619 301 aa5.85□□□□□ -1.47
COL28A1-202ENST00000430711 APC2O95996 2303 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 KIR2DL5BA0A0G2JN68 375 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 KIR2DL5BA0A0G2JPC4 375 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 MDFIC2A0A1B0GVS7 189 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 F2RL2O00254 374 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 TGOLN2O43493 480 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 PDE6DO43924 150 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 PLAUP00749 431 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 APELAP0DMC3 54 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 IRF2P14316 349 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 CCL3L1P16619 93 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 NPY1RP25929 384 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 TFPI2P48307 235 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 FOXL1Q12952 345 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 PSG5Q15238 335 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 IQCJQ1A5X6 159 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 GDF5OSQ5U4N7 250 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 TOMM20LQ6UXN7 152 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms