RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 CACNG5Q9UF02 275 aa9.62□□□□□ -0.87
USP40-205ENST00000430158 IGLV11-55A0A075B6I3 123 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 A0A1B0GU03 582 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 TRGV3P03979 118 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 IL5P05113 134 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 REG1AP05451 166 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 OR13C7P0DN81 318 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 SLC25A6P12236 298 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 DEFA5Q01523 94 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 C2orf68Q2NKX9 166 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 TMEM65Q6PI78 240 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 HSD17B13Q7Z5P4 300 aaPredicted RBP9.61□□□□□ -0.87
USP40-205ENST00000430158 C4orf3Q8WVX3 66 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 RAX2Q96IS3 184 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 P2RX4Q99571 388 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 SEC22CQ9BRL7 303 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 KRTAP4-8Q9BYQ9 185 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 PALMDQ9NP74 551 aa9.61□□□□□ -0.87
USP40-205ENST00000430158 M0QZ24 198 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 ADAP1O75689 374 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 SULT1A3P0DMM9 295 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 SULT1A4P0DMN0 295 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 RAB25P57735 213 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 TPPP2P59282 170 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 DEFA1P59665 94 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 DEFA3P59666 94 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 SPCS3P61009 180 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 RHOGP84095 191 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 FHL3Q13643 280 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 SMCO1Q147U7 214 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 BSXQ3C1V8 233 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 C4orf46Q504U0 113 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 GGNBP1Q5YKI7 109 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 C8orf86Q6ZUL3 223 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 ZNF114Q8NC26 417 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 KLHL30-AS1Q8NEE0 82 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 ENKURQ8TC29 256 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 ZNF431Q8TF32 576 aaPredicted RBP9.6□□□□□ -0.87
USP40-205ENST00000430158 HSPB7Q9UBY9 170 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 TMED3Q9Y3Q3 217 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 DNAH3Q8TD57 4116 aa9.6□□□□□ -0.87
USP40-205ENST00000430158 MPTX1A8MV57 137 aa9.59□□□□□ -0.87
USP40-205ENST00000430158 NDUFB8O95169 186 aa9.59□□□□□ -0.87
USP40-205ENST00000430158 HOXB5P09067 269 aa9.59□□□□□ -0.87
USP40-205ENST00000430158 LGALS1P09382 135 aaKnown RBP9.59□□□□□ -0.87
USP40-205ENST00000430158 DEFB136Q30KP8 78 aa9.59□□□□□ -0.87
USP40-205ENST00000430158 SPINK9Q5DT21 86 aa9.59□□□□□ -0.87
USP40-205ENST00000430158 C11orf87Q6NUJ2 197 aa9.59□□□□□ -0.87
USP40-205ENST00000430158 ZNF343Q6P1L6 599 aa9.59□□□□□ -0.87
USP40-205ENST00000430158 NECAP1Q8NC96 275 aa9.59□□□□□ -0.87
USP40-205ENST00000430158 WFDC9Q8NEX5 89 aa9.59□□□□□ -0.87
USP40-205ENST00000430158 USMG5Q96IX5 58 aa9.59□□□□□ -0.87
USP40-205ENST00000430158 HINT2Q9BX68 163 aa9.59□□□□□ -0.87
USP40-205ENST00000430158 F11RQ9Y624 299 aaKnown RBP9.59□□□□□ -0.87
USP40-205ENST00000430158 PIGBOS1A0A0B4J2F0 54 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 FAM223BA6NKX1 122 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 INMT-MINDY4F8WBC2 141 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 OR2J3O76001 311 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 IGHV3-11P01762 117 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 RNASE2P10153 161 aaKnown RBP9.58□□□□□ -0.88
USP40-205ENST00000430158 KHDC1LQ5JSQ8 128 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 FAM223AQ8IWN6 122 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 OR4F17Q8NGA8 305 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 OR1P1Q8NH06 330 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 COQ8AQ8NI60 647 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 RNASE11Q8TAA1 199 aaKnown RBP9.58□□□□□ -0.88
USP40-205ENST00000430158 TMEM170AQ8WVE7 144 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 DUX3Q96PT4 197 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 OR4F4Q96R69 305 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 ZNF355PQ9NSJ1 428 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 SORL1Q92673 2214 aa9.58□□□□□ -0.88
USP40-205ENST00000430158 A0A0G2JLM5 398 aa9.57□□□□□ -0.88
USP40-205ENST00000430158 CCL24O00175 119 aa9.57□□□□□ -0.88
USP40-205ENST00000430158 PTTG1O95997 202 aa9.57□□□□□ -0.88
USP40-205ENST00000430158 IFNA17P01571 189 aa9.57□□□□□ -0.88
USP40-205ENST00000430158 TRBV12-3P01733 135 aa9.57□□□□□ -0.88
USP40-205ENST00000430158 HIST1H1BP16401 226 aaKnown RBP9.57□□□□□ -0.88
USP40-205ENST00000430158 MYCNOSP40205 109 aa9.57□□□□□ -0.88
USP40-205ENST00000430158 TNFRSF9Q07011 255 aa9.57□□□□□ -0.88
USP40-205ENST00000430158 C15orf32Q32M92 178 aa9.57□□□□□ -0.88
USP40-205ENST00000430158 PLET1Q6UQ28 207 aa9.57□□□□□ -0.88
USP40-205ENST00000430158 MRPL41Q8IXM3 137 aaKnown RBP9.57□□□□□ -0.88
USP40-205ENST00000430158 C12orf45Q8N5I9 185 aaPredicted RBP9.57□□□□□ -0.88
USP40-205ENST00000430158 LINC00482Q8N8I6 264 aa9.57□□□□□ -0.88
USP40-205ENST00000430158 OR10C1Q96KK4 312 aa9.57□□□□□ -0.88
USP40-205ENST00000430158 OR5B12Q96R08 314 aa9.57□□□□□ -0.88
USP40-205ENST00000430158 PLEKHA3Q9HB20 300 aa9.57□□□□□ -0.88
USP40-205ENST00000430158 FBXL7Q9UJT9 491 aa9.57□□□□□ -0.88
USP40-205ENST00000430158 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.56□□□□□ -0.88
USP40-205ENST00000430158 SNRPGP15A8MWD9 76 aa9.56□□□□□ -0.88
USP40-205ENST00000430158 NUDT19A8MXV4 375 aa9.56□□□□□ -0.88
USP40-205ENST00000430158 F8W735 103 aaPredicted RBP9.56□□□□□ -0.88
USP40-205ENST00000430158 K7EIM0 57 aa9.56□□□□□ -0.88
USP40-205ENST00000430158 ID3Q02535 119 aa9.56□□□□□ -0.88
USP40-205ENST00000430158 ATP5G2Q06055 141 aa9.56□□□□□ -0.88
USP40-205ENST00000430158 IL15RAQ13261 267 aa9.56□□□□□ -0.88
USP40-205ENST00000430158 DCTN2Q13561 401 aaKnown RBP9.56□□□□□ -0.88
USP40-205ENST00000430158 OR4D5Q8NGN0 318 aa9.56□□□□□ -0.88
USP40-205ENST00000430158 ZNF414Q96IQ9 312 aa9.56□□□□□ -0.88
USP40-205ENST00000430158 CCDC140Q96MF4 163 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms