RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TRAV38-1A0A0B4J264 116 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 A8MWP6 167 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 DEFB108AA8MXU0 73 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 LHBP01229 141 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 IL6RP08887 468 aaPredicted RBP7.16□□□□□ -1.26
GABPB1-205ENST00000429662 ARL14EPLP0DKL9 152 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 CGB3P0DN86 165 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 CGB7P0DN87 165 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 GCHFRP30047 84 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 GLRXP35754 106 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 CHRNA7P36544 502 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 GATA4P43694 442 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 SELENOVP59797 346 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 TIMM23BQ5SRD1 257 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 VWA1Q6PCB0 445 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 MRPL52Q86TS9 123 aaKnown RBP7.16□□□□□ -1.26
GABPB1-205ENST00000429662 MRPL41Q8IXM3 137 aaKnown RBP7.16□□□□□ -1.26
GABPB1-205ENST00000429662 PNKDQ8N490 385 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 SLC24A4Q8NFF2 622 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 OR2Z1Q8NG97 314 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 SGMS2Q8NHU3 365 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 FAM222BQ8WU58 562 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 MEGF10Q96KG7 1140 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 RNF2Q99496 336 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 NDUFAF3Q9BU61 184 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 ELOVL1Q9BW60 279 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 IFI27L2Q9H2X8 130 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 TMEM14BQ9NUH8 114 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 ELOVL5Q9NYP7 299 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 IL36BQ9NZH7 164 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 DUSP13Q9UII6 198 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 SLC45A2Q9UMX9 530 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 SLC25A15Q9Y619 301 aa7.16□□□□□ -1.26
GABPB1-205ENST00000429662 IGHV3-64DA0A0J9YX35 117 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 KBTBD11-OT1A0A1B0GTJ5 212 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 MBD3L4A6NDZ8 208 aaPredicted RBP7.15□□□□□ -1.26
GABPB1-205ENST00000429662 MBD3L3A6NE82 208 aaPredicted RBP7.15□□□□□ -1.26
GABPB1-205ENST00000429662 MBD3L5A6NJ08 208 aaPredicted RBP7.15□□□□□ -1.26
GABPB1-205ENST00000429662 RRHO14718 337 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 SLC31A2O15432 143 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 PROP1O75360 226 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 CGAP01215 116 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 RD3LP0DJH9 198 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 TIMP3P35625 211 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 ATP5G3P48201 142 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 CCL11P51671 97 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 KLF3P57682 345 aaPredicted RBP7.15□□□□□ -1.26
GABPB1-205ENST00000429662 TAS2R45P59539 299 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 TAS2R60P59551 318 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 UBE2G2P60604 165 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 SELENOTP62341 195 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 SPINK9Q5DT21 86 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 CDPF1Q6NVV7 123 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 TPRX1Q8N7U7 411 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 MBD3L2Q8NHZ7 208 aaPredicted RBP7.15□□□□□ -1.26
GABPB1-205ENST00000429662 SDSLQ96GA7 329 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 LINC00574Q9H8X3 128 aa7.15□□□□□ -1.26
GABPB1-205ENST00000429662 FREM1Q5H8C1 2179 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 JMJD1CQ15652 2540 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 IGLV3-9A0A075B6K5 115 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 ZNF705GA8MUZ8 300 aaPredicted RBP7.14□□□□□ -1.27
GABPB1-205ENST00000429662 TNFSF13O75888 250 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 CRYAAP02489 173 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 MT-ND6P03923 174 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 OR10J4P0C629 311 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 ESDP10768 282 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 EGR1P18146 543 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 TNFSF4P23510 183 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 OR10J1P30954 320 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 RPS16P62249 146 aaKnown RBP7.14□□□□□ -1.27
GABPB1-205ENST00000429662 RANP62826 216 aaKnown RBP7.14□□□□□ -1.27
GABPB1-205ENST00000429662 MRPS11P82912 194 aaKnown RBP7.14□□□□□ -1.27
GABPB1-205ENST00000429662 EFNB3Q15768 340 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 MIC13Q5XKP0 118 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 FAM53AQ6NSI3 398 aaPredicted RBP7.14□□□□□ -1.27
GABPB1-205ENST00000429662 WDR73Q6P4I2 378 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 TEX38Q6PEX7 206 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 PQLC2Q6ZP29 291 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 FDCSPQ8NFU4 85 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 NEUROG1Q92886 237 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 STARD4Q96DR4 205 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 RHOVQ96L33 236 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 PATZ1Q9HBE1 687 aaKnown RBP7.14□□□□□ -1.27
GABPB1-205ENST00000429662 TECRQ9NZ01 308 aaKnown RBP7.14□□□□□ -1.27
GABPB1-205ENST00000429662 IDI2-AS1Q9NZ38 188 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 RNF7Q9UBF6 113 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 IL19Q9UHD0 177 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 ZGRF1Q86YA3 2104 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 CUBNO60494 3623 aa7.14□□□□□ -1.27
GABPB1-205ENST00000429662 CSPG4Q6UVK1 2322 aa7.13□□□□□ -1.27
GABPB1-205ENST00000429662 TPPP2P59282 170 aa7.13□□□□□ -1.27
GABPB1-205ENST00000429662 KRTAP10-9P60411 292 aa7.13□□□□□ -1.27
GABPB1-205ENST00000429662 PRCDQ00LT1 54 aa7.13□□□□□ -1.27
GABPB1-205ENST00000429662 ZNF90Q03938 601 aa7.13□□□□□ -1.27
GABPB1-205ENST00000429662 LTC4SQ16873 150 aa7.13□□□□□ -1.27
GABPB1-205ENST00000429662 C17orf58Q2M2W7 97 aa7.13□□□□□ -1.27
GABPB1-205ENST00000429662 C2orf83Q53S99 150 aa7.13□□□□□ -1.27
GABPB1-205ENST00000429662 RPL39P5Q59GN2 51 aa7.13□□□□□ -1.27
GABPB1-205ENST00000429662 OR4A47Q6IF82 309 aa7.13□□□□□ -1.27
GABPB1-205ENST00000429662 ABHD12Q8N2K0 398 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms