RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 TMEM56Q96MV1 263 aa12.72□□□□□ -0.37
VRK2-204ENST00000428021 SRRQ9GZT4 340 aa12.72□□□□□ -0.37
VRK2-204ENST00000428021 NDUFA13Q9P0J0 144 aa12.72□□□□□ -0.37
VRK2-204ENST00000428021 TRBV7-1A0A0A6YYK4 115 aa12.71□□□□□ -0.37
VRK2-204ENST00000428021 GGCTO75223 188 aaKnown RBP12.71□□□□□ -0.37
VRK2-204ENST00000428021 OR2C1O95371 312 aa12.71□□□□□ -0.37
VRK2-204ENST00000428021 IGLV1-51P01701 117 aa12.71□□□□□ -0.37
VRK2-204ENST00000428021 SPNP16150 400 aa12.71□□□□□ -0.37
VRK2-204ENST00000428021 AKR1C2P52895 323 aa12.71□□□□□ -0.37
VRK2-204ENST00000428021 PRCDQ00LT1 54 aa12.71□□□□□ -0.37
VRK2-204ENST00000428021 TATDN3Q17R31 274 aa12.71□□□□□ -0.37
VRK2-204ENST00000428021 SPANXN2Q5MJ10 180 aa12.71□□□□□ -0.37
VRK2-204ENST00000428021 SLC25A24Q6NUK1 477 aa12.71□□□□□ -0.37
VRK2-204ENST00000428021 TOMM5Q8N4H5 51 aa12.71□□□□□ -0.37
VRK2-204ENST00000428021 OR2C3Q8N628 320 aa12.71□□□□□ -0.37
VRK2-204ENST00000428021 CXorf58Q96LI9 332 aa12.71□□□□□ -0.37
VRK2-204ENST00000428021 ATG12O94817 140 aa12.7□□□□□ -0.38
VRK2-204ENST00000428021 CLEC3BP05452 202 aa12.7□□□□□ -0.38
VRK2-204ENST00000428021 MECP2P51608 486 aaKnown RBP12.7□□□□□ -0.38
VRK2-204ENST00000428021 AP3S2P59780 193 aa12.7□□□□□ -0.38
VRK2-204ENST00000428021 DHODHQ02127 395 aa12.7□□□□□ -0.38
VRK2-204ENST00000428021 ADAMTSL5Q6ZMM2 481 aa12.7□□□□□ -0.38
VRK2-204ENST00000428021 Q6ZRM9 215 aa12.7□□□□□ -0.38
VRK2-204ENST00000428021 SELENOHQ8IZQ5 122 aaKnown RBP12.7□□□□□ -0.38
VRK2-204ENST00000428021 VN1R17PQ8TDU5 208 aa12.7□□□□□ -0.38
VRK2-204ENST00000428021 SCGB3A2Q96PL1 93 aa12.7□□□□□ -0.38
VRK2-204ENST00000428021 SIGLEC8Q9NYZ4 499 aa12.7□□□□□ -0.38
VRK2-204ENST00000428021 THYN1Q9P016 225 aa12.7□□□□□ -0.38
VRK2-204ENST00000428021 CYB5BO43169 146 aa12.69□□□□□ -0.38
VRK2-204ENST00000428021 ST8SIA3O43173 380 aa12.69□□□□□ -0.38
VRK2-204ENST00000428021 LY86O95711 162 aa12.69□□□□□ -0.38
VRK2-204ENST00000428021 FAUP35544 74 aaKnown RBP12.69□□□□□ -0.38
VRK2-204ENST00000428021 ARL3P36405 182 aa12.69□□□□□ -0.38
VRK2-204ENST00000428021 SUPT4H1P63272 117 aaKnown RBP12.69□□□□□ -0.38
VRK2-204ENST00000428021 TMEM187Q14656 261 aa12.69□□□□□ -0.38
VRK2-204ENST00000428021 SPINK9Q5DT21 86 aa12.69□□□□□ -0.38
VRK2-204ENST00000428021 GPHB5Q86YW7 130 aa12.69□□□□□ -0.38
VRK2-204ENST00000428021 OR1P1Q8NH06 330 aa12.69□□□□□ -0.38
VRK2-204ENST00000428021 RBPMSQ93062 196 aaKnown RBP12.69□□□□□ -0.38
VRK2-204ENST00000428021 RRNAD1Q96FB5 475 aaKnown RBP12.69□□□□□ -0.38
VRK2-204ENST00000428021 GALNT14Q96FL9 552 aa12.69□□□□□ -0.38
VRK2-204ENST00000428021 SDHCQ99643 169 aaPredicted RBP12.69□□□□□ -0.38
VRK2-204ENST00000428021 TMEM56-RWDD3S4R434 201 aa12.69□□□□□ -0.38
VRK2-204ENST00000428021 K7EIM0 57 aa12.68□□□□□ -0.38
VRK2-204ENST00000428021 GP9P14770 177 aa12.68□□□□□ -0.38
VRK2-204ENST00000428021 BAK1Q16611 211 aa12.68□□□□□ -0.38
VRK2-204ENST00000428021 SGPP2Q8IWX5 399 aa12.68□□□□□ -0.38
VRK2-204ENST00000428021 ZNF114Q8NC26 417 aa12.68□□□□□ -0.38
VRK2-204ENST00000428021 OR1L6Q8NGR2 347 aa12.68□□□□□ -0.38
VRK2-204ENST00000428021 DEDD2Q8WXF8 326 aa12.68□□□□□ -0.38
VRK2-204ENST00000428021 PRR13Q9NZ81 148 aa12.68□□□□□ -0.38
VRK2-204ENST00000428021 PEMTQ9UBM1 199 aa12.68□□□□□ -0.38
VRK2-204ENST00000428021 IGHV3-21A0A0B4J1V1 117 aa12.67□□□□□ -0.38
VRK2-204ENST00000428021 F8W735 103 aaPredicted RBP12.67□□□□□ -0.38
VRK2-204ENST00000428021 INS-IGF2F8WCM5 200 aa12.67□□□□□ -0.38
VRK2-204ENST00000428021 LGALS9O00182 355 aa12.67□□□□□ -0.38
VRK2-204ENST00000428021 EDN2P20800 178 aa12.67□□□□□ -0.38
VRK2-204ENST00000428021 GPR183P32249 361 aa12.67□□□□□ -0.38
VRK2-204ENST00000428021 AARDQ4LEZ3 155 aa12.67□□□□□ -0.38
VRK2-204ENST00000428021 TMEM268Q5VZI3 342 aa12.67□□□□□ -0.38
VRK2-204ENST00000428021 FAM219AQ8IW50 185 aa12.67□□□□□ -0.38
VRK2-204ENST00000428021 SCARB1Q8WTV0 552 aa12.67□□□□□ -0.38
VRK2-204ENST00000428021 GPR146Q96CH1 333 aa12.67□□□□□ -0.38
VRK2-204ENST00000428021 PLEKHA3Q9HB20 300 aa12.67□□□□□ -0.38
VRK2-204ENST00000428021 ZC4H2Q9NQZ6 224 aa12.67□□□□□ -0.38
VRK2-204ENST00000428021 C2orf70A6NJV1 201 aa12.66□□□□□ -0.38
VRK2-204ENST00000428021 I3L2K1 104 aa12.66□□□□□ -0.38
VRK2-204ENST00000428021 AKR1C4P17516 323 aa12.66□□□□□ -0.38
VRK2-204ENST00000428021 DCTN2Q13561 401 aaKnown RBP12.66□□□□□ -0.38
VRK2-204ENST00000428021 RNASE11Q8TAA1 199 aaKnown RBP12.66□□□□□ -0.38
VRK2-204ENST00000428021 B9D2Q9BPU9 175 aa12.66□□□□□ -0.38
VRK2-204ENST00000428021 KCNIP3Q9Y2W7 256 aa12.66□□□□□ -0.38
VRK2-204ENST00000428021 TGOLN2O43493 480 aa12.65□□□□□ -0.38
VRK2-204ENST00000428021 IFNA17P01571 189 aa12.65□□□□□ -0.38
VRK2-204ENST00000428021 ERHP84090 104 aaKnown RBP12.65□□□□□ -0.38
VRK2-204ENST00000428021 FAM106AQ4KMX7 169 aa12.65□□□□□ -0.38
VRK2-204ENST00000428021 ZNF57Q68EA5 555 aaPredicted RBP12.65□□□□□ -0.38
VRK2-204ENST00000428021 PVRIGQ6DKI7 326 aa12.65□□□□□ -0.38
VRK2-204ENST00000428021 PLET1Q6UQ28 207 aa12.65□□□□□ -0.38
VRK2-204ENST00000428021 UNQ9165/PRO28630Q6UXU0 137 aa12.65□□□□□ -0.38
VRK2-204ENST00000428021 SLC35G3Q8N808 338 aa12.65□□□□□ -0.38
VRK2-204ENST00000428021 IL22RA2Q969J5 263 aa12.65□□□□□ -0.38
VRK2-204ENST00000428021 ATP6V0BQ99437 205 aa12.65□□□□□ -0.38
VRK2-204ENST00000428021 C21orf62Q9NYP8 219 aa12.65□□□□□ -0.38
VRK2-204ENST00000428021 TMEM213A2RRL7 107 aa12.64□□□□□ -0.39
VRK2-204ENST00000428021 IZUMO1RA6ND01 250 aa12.64□□□□□ -0.39
VRK2-204ENST00000428021 OR2T8A6NH00 312 aa12.64□□□□□ -0.39
VRK2-204ENST00000428021 FOLR2P14207 255 aa12.64□□□□□ -0.39
VRK2-204ENST00000428021 Q8N1Y9 231 aa12.64□□□□□ -0.39
VRK2-204ENST00000428021 MISP3Q96FF7 219 aa12.64□□□□□ -0.39
VRK2-204ENST00000428021 ZNF414Q96IQ9 312 aa12.64□□□□□ -0.39
VRK2-204ENST00000428021 SLC25A21Q9BQT8 299 aaPredicted RBP12.64□□□□□ -0.39
VRK2-204ENST00000428021 CHRDL1Q9BU40 450 aa12.64□□□□□ -0.39
VRK2-204ENST00000428021 ZNF436Q9C0F3 470 aaPredicted RBP12.64□□□□□ -0.39
VRK2-204ENST00000428021 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.64□□□□□ -0.39
VRK2-204ENST00000428021 CACNG5Q9UF02 275 aa12.64□□□□□ -0.39
VRK2-204ENST00000428021 IGHV3-35A0A0C4DH35 117 aa12.63□□□□□ -0.39
VRK2-204ENST00000428021 ZNF320A2RRD8 509 aa12.63□□□□□ -0.39
VRK2-204ENST00000428021 A8MWP6 167 aa12.63□□□□□ -0.39
VRK2-204ENST00000428021 RNASE2P10153 161 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms