RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 ITLN1Q8WWA0 313 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 SSMEM1Q8WWF3 244 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 OR5B12Q96R08 314 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 ANKRD11Q6UB99 2663 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-205ENST00000425443 TRAV3A0A0B4J244 114 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 TRAV34A0A0B4J273 112 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 SRRM5B3KS81 715 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 SAP30O75446 220 aa10.73□□□□□ -0.69
COL12A1-205ENST00000425443 TET2Q6N021 2002 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-205ENST00000425443 PROP1O75360 226 aa10.72□□□□□ -0.69
COL12A1-205ENST00000425443 LINC01551Q86U37 167 aa10.72□□□□□ -0.69
COL12A1-205ENST00000425443 ABHD12Q8N2K0 398 aa10.72□□□□□ -0.69
COL12A1-205ENST00000425443 GCSAMQ8N6F7 178 aa10.72□□□□□ -0.69
COL12A1-205ENST00000425443 FAM222BQ8WU58 562 aa10.72□□□□□ -0.69
COL12A1-205ENST00000425443 TBX15Q96SF7 602 aa10.72□□□□□ -0.69
COL12A1-205ENST00000425443 TBL2Q9Y4P3 447 aaKnown RBP10.72□□□□□ -0.69
COL12A1-205ENST00000425443 C11orf94C9JXX5 98 aa10.72□□□□□ -0.69
COL12A1-205ENST00000425443 TMEM250H0YL14 139 aa10.72□□□□□ -0.69
COL12A1-205ENST00000425443 HRASP01112 189 aa10.72□□□□□ -0.69
COL12A1-205ENST00000425443 GNB1P62873 340 aa10.72□□□□□ -0.69
COL12A1-205ENST00000425443 MSMPQ1L6U9 139 aa10.72□□□□□ -0.69
COL12A1-205ENST00000425443 AKAP13Q12802 2813 aa10.72□□□□□ -0.69
COL12A1-205ENST00000425443 A0A1W2PPV4 95 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 C15orf62A8K5M9 175 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 PPP5D1E7EU14 171 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 CEACAM4O75871 244 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 GLRXP35754 106 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 MORN2Q502X0 79 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 ACTL10Q5JWF8 245 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 TMEM186Q96B77 213 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 S1PR3Q99500 378 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 SELENOKQ9Y6D0 94 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 TACC2O95359 2948 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 C15orf65H3BRN8 121 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 NUPR1O60356 82 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 C1QTNF9P0C862 333 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 LGALS7P47929 136 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 ZNF738Q8NE65 137 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 Q8TCH9 128 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 TMEM170AQ8WVE7 144 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 JPT1Q9UK76 154 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 FAM215AQ9Y5M1 114 aa10.71□□□□□ -0.69
COL12A1-205ENST00000425443 CEP295Q9C0D2 2601 aa10.71□□□□□ -0.7
COL12A1-205ENST00000425443 KIR2DL5BA0A0G2JN68 375 aa10.71□□□□□ -0.7
COL12A1-205ENST00000425443 KIR2DL5BA0A0G2JPC4 375 aa10.71□□□□□ -0.7
COL12A1-205ENST00000425443 CNIH1O95406 144 aa10.71□□□□□ -0.7
COL12A1-205ENST00000425443 MYOD1P15172 320 aa10.71□□□□□ -0.7
COL12A1-205ENST00000425443 FAM27E3Q08E93 113 aa10.71□□□□□ -0.7
COL12A1-205ENST00000425443 VWC2Q2TAL6 325 aa10.71□□□□□ -0.7
COL12A1-205ENST00000425443 KIR2DL5AQ8N109 375 aa10.71□□□□□ -0.7
COL12A1-205ENST00000425443 RNASEH2CQ8TDP1 164 aaKnown RBP10.71□□□□□ -0.7
COL12A1-205ENST00000425443 MIEN1Q9BRT3 115 aa10.71□□□□□ -0.7
COL12A1-205ENST00000425443 FKBP11Q9NYL4 201 aa10.71□□□□□ -0.7
COL12A1-205ENST00000425443 RELNP78509 3460 aa10.7□□□□□ -0.7
COL12A1-205ENST00000425443 ZNF318Q5VUA4 2279 aa10.7□□□□□ -0.7
COL12A1-205ENST00000425443 TRBV20OR9-2A0A075B6H5 130 aa10.7□□□□□ -0.7
COL12A1-205ENST00000425443 C17orf112F2Z3M2 114 aa10.7□□□□□ -0.7
COL12A1-205ENST00000425443 RRHO14718 337 aa10.7□□□□□ -0.7
COL12A1-205ENST00000425443 NDUFB4O95168 129 aa10.7□□□□□ -0.7
COL12A1-205ENST00000425443 DUTP33316 252 aaKnown RBP10.7□□□□□ -0.7
COL12A1-205ENST00000425443 DUX4L9Q6RFH8 374 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-205ENST00000425443 FAM169BQ8N8A8 192 aa10.7□□□□□ -0.7
COL12A1-205ENST00000425443 OR6C3Q9NZP0 311 aa10.7□□□□□ -0.7
COL12A1-205ENST00000425443 APC2O95996 2303 aa10.7□□□□□ -0.7
COL12A1-205ENST00000425443 BRI3O95415 125 aa10.7□□□□□ -0.7
COL12A1-205ENST00000425443 CD1BP29016 333 aa10.7□□□□□ -0.7
COL12A1-205ENST00000425443 TNFAIP6P98066 277 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-205ENST00000425443 COA6Q5JTJ3 125 aaKnown RBP10.7□□□□□ -0.7
COL12A1-205ENST00000425443 FAM78BQ5VT40 261 aa10.7□□□□□ -0.7
COL12A1-205ENST00000425443 MIC13Q5XKP0 118 aa10.7□□□□□ -0.7
COL12A1-205ENST00000425443 RBFOX2O43251 390 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL12A1-205ENST00000425443 PDLIM4P50479 330 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 SMAGPQ0VAQ4 97 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 PDLIM3Q53GG5 364 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-205ENST00000425443 TCF23Q7RTU1 214 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 TGIF2LYQ8IUE0 185 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 OR2T10Q8NGZ9 312 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 NEIL1Q96FI4 390 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-205ENST00000425443 CALYQ9NYX4 217 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 STAG3L2P0CL84 134 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 IL3RAP26951 378 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 ID1P41134 155 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 ZNF134P52741 427 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 Q6ZS92 163 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 C1orf229Q6ZS94 237 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-205ENST00000425443 FAM90A1Q86YD7 464 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 OR1N2Q8NGR9 330 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 MANBALQ9NQG1 85 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 K7EM74 188 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 YPEL1O60688 119 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 RBPJQ06330 500 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 IGFL3Q6UXB1 125 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 TMEM256Q8N2U0 113 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 SFRP2Q96HF1 295 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 YPEL2Q96QA6 119 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 ZNRD1Q9P1U0 126 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 RNF7Q9UBF6 113 aa10.69□□□□□ -0.7
COL12A1-205ENST00000425443 PLXNB1O43157 2135 aa10.68□□□□□ -0.7
COL12A1-205ENST00000425443 TRGV10A0A0A0MS01 117 aa10.68□□□□□ -0.7
COL12A1-205ENST00000425443 IGHV2-70DA0A0C4DH43 119 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms