RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 INS-IGF2F8WCM5 200 aa7.97□□□□□ -1.13
CD44-207ENST00000425428 TSC22D2O75157 780 aa7.97□□□□□ -1.13
CD44-207ENST00000425428 DEDDO75618 318 aa7.97□□□□□ -1.13
CD44-207ENST00000425428 NPY1RP25929 384 aa7.97□□□□□ -1.13
CD44-207ENST00000425428 HBG1P69891 147 aa7.97□□□□□ -1.13
CD44-207ENST00000425428 HBG2P69892 147 aa7.97□□□□□ -1.13
CD44-207ENST00000425428 SRSF4Q08170 494 aaKnown RBP7.97□□□□□ -1.13
CD44-207ENST00000425428 OR2C3Q8N628 320 aa7.97□□□□□ -1.13
CD44-207ENST00000425428 FAM110DQ8TAY7 271 aaPredicted RBP7.97□□□□□ -1.13
CD44-207ENST00000425428 CHAC2Q8WUX2 184 aa7.97□□□□□ -1.13
CD44-207ENST00000425428 DCUN1D4Q92564 292 aa7.97□□□□□ -1.13
CD44-207ENST00000425428 SLA2Q9H6Q3 261 aa7.97□□□□□ -1.13
CD44-207ENST00000425428 RNF114Q9Y508 228 aa7.97□□□□□ -1.13
CD44-207ENST00000425428 A0A0G2JLM5 398 aa7.96□□□□□ -1.14
CD44-207ENST00000425428 TMEM89A2RUT3 159 aa7.96□□□□□ -1.14
CD44-207ENST00000425428 CLPSL1A2RUU4 121 aa7.96□□□□□ -1.14
CD44-207ENST00000425428 HKR1P10072 659 aa7.96□□□□□ -1.14
CD44-207ENST00000425428 PF4V1P10720 104 aa7.96□□□□□ -1.14
CD44-207ENST00000425428 MYOD1P15172 320 aa7.96□□□□□ -1.14
CD44-207ENST00000425428 CRIP2P52943 208 aaPredicted RBP7.96□□□□□ -1.14
CD44-207ENST00000425428 EXOSC2Q13868 293 aaKnown RBP7.96□□□□□ -1.14
CD44-207ENST00000425428 PRSS54Q6PEW0 395 aa7.96□□□□□ -1.14
CD44-207ENST00000425428 OR10W1Q8NGF6 305 aa7.96□□□□□ -1.14
CD44-207ENST00000425428 OR1P1Q8NH06 330 aa7.96□□□□□ -1.14
CD44-207ENST00000425428 TMEM158Q8WZ71 300 aa7.96□□□□□ -1.14
CD44-207ENST00000425428 WNT10AQ9GZT5 417 aa7.96□□□□□ -1.14
CD44-207ENST00000425428 LINC00527Q9UJ94 153 aa7.96□□□□□ -1.14
CD44-207ENST00000425428 IGLC7A0M8Q6 106 aa7.95□□□□□ -1.14
CD44-207ENST00000425428 TEX22C9J3V5 150 aa7.95□□□□□ -1.14
CD44-207ENST00000425428 TRGV3P03979 118 aa7.95□□□□□ -1.14
CD44-207ENST00000425428 REG1AP05451 166 aa7.95□□□□□ -1.14
CD44-207ENST00000425428 ELANEP08246 267 aa7.95□□□□□ -1.14
CD44-207ENST00000425428 P2RY1P47900 373 aa7.95□□□□□ -1.14
CD44-207ENST00000425428 MRGPRG-AS1Q2M3A8 158 aa7.95□□□□□ -1.14
CD44-207ENST00000425428 FAM209BQ5JX69 171 aa7.95□□□□□ -1.14
CD44-207ENST00000425428 C11orf87Q6NUJ2 197 aa7.95□□□□□ -1.14
CD44-207ENST00000425428 ZNF114Q8NC26 417 aa7.95□□□□□ -1.14
CD44-207ENST00000425428 OR10P1Q8NGE3 313 aa7.95□□□□□ -1.14
CD44-207ENST00000425428 MISP3Q96FF7 219 aa7.95□□□□□ -1.14
CD44-207ENST00000425428 NOL4LQ96MY1 436 aaPredicted RBP7.95□□□□□ -1.14
CD44-207ENST00000425428 RANGRFQ9HD47 186 aaPredicted RBP7.95□□□□□ -1.14
CD44-207ENST00000425428 GAR1Q9NY12 217 aaKnown RBP7.95□□□□□ -1.14
CD44-207ENST00000425428 F11RQ9Y624 299 aaKnown RBP7.95□□□□□ -1.14
CD44-207ENST00000425428 TEP1Q99973 2627 aaKnown RBP7.95□□□□□ -1.14
CD44-207ENST00000425428 FXYD6-FXYD2A0A087WZ82 144 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 FAM223BA6NKX1 122 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 G3V318 75 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 FBXO24O75426 580 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 CRYGCP07315 174 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 AREGP15514 252 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 CTRB1P17538 263 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 OPRK1P41145 380 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 TPPP2P59282 170 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 NDPQ00604 133 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 WT1-ASQ06250 92 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 C2orf83Q53S99 150 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 KHDC1LQ5JSQ8 128 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 CTRB2Q6GPI1 263 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 ZNF546Q86UE3 836 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 FAM223AQ8IWN6 122 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 KLHDC1Q8N7A1 406 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 OR5AU1Q8NGC0 362 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 RNASEH2CQ8TDP1 164 aaKnown RBP7.94□□□□□ -1.14
CD44-207ENST00000425428 PINX1Q96BK5 328 aaKnown RBP7.94□□□□□ -1.14
CD44-207ENST00000425428 USMG5Q96IX5 58 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 CXorf58Q96LI9 332 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 A0A1B0GVG6 124 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 LINC01548A6NM66 108 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 E7EUB6 86 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 H3BP45 60 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 EGR2P11161 476 aaPredicted RBP7.94□□□□□ -1.14
CD44-207ENST00000425428 C4BPBP20851 252 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 ATP5G2Q06055 141 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 BAXQ07812 192 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 FOXE3Q13461 319 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 TMEM95Q3KNT9 176 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 ZFP69Q49AA0 526 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 ETV3LQ6ZN32 361 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 TCTE3Q8IZS6 198 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 LILRB2Q8N423 598 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 NECAP1Q8NC96 275 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 LINC01006Q8NI28 216 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 WDR89Q96FK6 387 aaPredicted RBP7.94□□□□□ -1.14
CD44-207ENST00000425428 SLC35E1Q96K37 410 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 LYRM2Q9NU23 88 aaPredicted RBP7.94□□□□□ -1.14
CD44-207ENST00000425428 MBD2Q9UBB5 411 aa7.94□□□□□ -1.14
CD44-207ENST00000425428 IGHG4P01861 327 aa7.93□□□□□ -1.14
CD44-207ENST00000425428 SLC25A4P12235 298 aa7.93□□□□□ -1.14
CD44-207ENST00000425428 S100A11P31949 105 aa7.93□□□□□ -1.14
CD44-207ENST00000425428 AP2S1P53680 142 aaPredicted RBP7.93□□□□□ -1.14
CD44-207ENST00000425428 IL15RAQ13261 267 aa7.93□□□□□ -1.14
CD44-207ENST00000425428 OR8G2PQ6IF36 304 aa7.93□□□□□ -1.14
CD44-207ENST00000425428 Q6ZS46 218 aa7.93□□□□□ -1.14
CD44-207ENST00000425428 ZNF329Q86UD4 541 aa7.93□□□□□ -1.14
CD44-207ENST00000425428 EEF1AKMT3Q96AZ1 226 aa7.93□□□□□ -1.14
CD44-207ENST00000425428 HYLS1Q96M11 299 aa7.93□□□□□ -1.14
CD44-207ENST00000425428 MS4A10Q96PG2 267 aa7.93□□□□□ -1.14
CD44-207ENST00000425428 P2RX4Q99571 388 aa7.93□□□□□ -1.14
CD44-207ENST00000425428 SERTAD4Q9NUC0 356 aa7.93□□□□□ -1.14
CD44-207ENST00000425428 FBXL7Q9UJT9 491 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms