RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 TNFSF13O75888 250 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 IGHG3P01860 377 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 FOSL1P15407 271 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 RPEL1Q2QD12 228 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 TRAT1Q6PIZ9 186 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 Q8N976 141 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 OR9G1Q8NH87 305 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 ITLN1Q8WWA0 313 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 TXNDC17Q9BRA2 123 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 ATMQ13315 3056 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 OR5AU1Q8NGC0 362 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 OR10W1Q8NGF6 305 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 NEUROG1Q92886 237 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 SAMD10Q9BYL1 202 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 ZNF71Q9NQZ8 489 aaPredicted RBP11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 DKK4Q9UBT3 224 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 SLC45A2Q9UMX9 530 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 FOXA2Q9Y261 457 aaPredicted RBP11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 PPIAL4AQ9Y536 164 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 OR51B2Q9Y5P1 312 aa11.6□□□□□ -0.55
TPM3P9-201ENST00000424846 TRAV5A0A0B4J249 113 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 HELTA6NFD8 242 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 C9JCJ5 164 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 BATFQ16520 125 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 MRPL54Q6P161 138 aaKnown RBP11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 STARD4Q96DR4 205 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 UHRF2Q96PU4 802 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 TACC2O95359 2948 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 A0A1B0GWJ7 208 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 OR7C2O60412 319 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 IGLV2-8P01709 118 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 ESDP10768 282 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 GNG4P50150 75 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 MRPS11P82912 194 aaKnown RBP11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 RPRMLQ8N4K4 120 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 FAM168AQ92567 244 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 RND1Q92730 232 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 NAT8BQ9UHF3 227 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 IGHV3-48P01763 117 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 KRTDAPP60985 99 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 SUMO1P63165 101 aaKnown RBP11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 SEM1Q6ZVN7 128 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 GCM1Q9NP62 436 aa11.59□□□□□ -0.55
TPM3P9-201ENST00000424846 SSBP2P81877 361 aaPredicted RBP11.58□□□□□ -0.56
TPM3P9-201ENST00000424846 TMEM136Q6ZRR5 245 aa11.58□□□□□ -0.56
TPM3P9-201ENST00000424846 CACNA1HO95180 2353 aa11.58□□□□□ -0.56
TPM3P9-201ENST00000424846 J3QR06 171 aa11.58□□□□□ -0.56
TPM3P9-201ENST00000424846 NPSP0C0P6 89 aa11.58□□□□□ -0.56
TPM3P9-201ENST00000424846 AREGP15514 252 aa11.58□□□□□ -0.56
TPM3P9-201ENST00000424846 TFPI2P48307 235 aa11.58□□□□□ -0.56
TPM3P9-201ENST00000424846 PAFAH1B2P68402 229 aa11.58□□□□□ -0.56
TPM3P9-201ENST00000424846 FAM216BQ8N7L0 139 aa11.58□□□□□ -0.56
TPM3P9-201ENST00000424846 SFXN3Q9BWM7 321 aa11.58□□□□□ -0.56
TPM3P9-201ENST00000424846 SSBP3Q9BWW4 388 aaPredicted RBP11.58□□□□□ -0.56
TPM3P9-201ENST00000424846 SLC25A15Q9Y619 301 aa11.58□□□□□ -0.56
TPM3P9-201ENST00000424846 CSMD1Q96PZ7 3565 aa11.58□□□□□ -0.56
TPM3P9-201ENST00000424846 ABCA1O95477 2261 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 E7EUB6 86 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 M0R1B8 84 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 C22orf34Q6ZV56 151 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 BHLHA15Q7RTS1 189 aaPredicted RBP11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 C20orf144Q9BQM9 153 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 MIEN1Q9BRT3 115 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 ENY2Q9NPA8 101 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 PLSCR4Q9NRQ2 329 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 TBL2Q9Y4P3 447 aaKnown RBP11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 A8MXE2 369 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 LHBP01229 141 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 GPX1P07203 203 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 MGST1P10620 155 aaKnown RBP11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 PMCHP20382 165 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 Q0VG73 95 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 FAM19A2Q8N3H0 131 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 C1orf162Q8NEQ5 155 aaPredicted RBP11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 CCL13Q99616 98 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 TMEM208Q9BTX3 173 aa11.57□□□□□ -0.56
TPM3P9-201ENST00000424846 KBTBD11-OT1A0A1B0GTJ5 212 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 SP9P0CG40 484 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 CX3CL1P78423 397 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 ZNF439Q8NDP4 499 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 VAMP8Q9BV40 100 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 PRR33A8MZF0 331 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 CT45A6P0DMU7 189 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 CT45A5P0DMU8 189 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 CT45A7P0DMV0 189 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 RANP62826 216 aaKnown RBP11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 RAB31Q13636 194 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 LHFPL4Q7Z7J7 247 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 OR2T6Q8NHC8 308 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 CHODLQ9H9P2 273 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 PKDREJQ9NTG1 2253 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 ZZEF1O43149 2961 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 TEX50A0A1B0GTY4 177 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 A0A1W2PS18 150 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 BMPR1BO00238 502 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 SRIP30626 198 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 GNB1LQ9BYB4 327 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 PLEKHA3Q9HB20 300 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 NRN1Q9NPD7 142 aa11.56□□□□□ -0.56
TPM3P9-201ENST00000424846 SERTAD4Q9NUC0 356 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms