RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 LINC00470Q9BZP3 86 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 ENY2Q9NPA8 101 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 TECRQ9NZ01 308 aaKnown RBP13.72□□□□□ -0.21
PKP4-204ENST00000421462 ZDBF2Q9HCK1 2354 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 TRAV9-1A0A075B6T8 112 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 TRBV9A0A0B4J1U6 114 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 IGHV2OR16-5A0A0B4J2B6 119 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 NPY1RP25929 384 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 NRN1LQ496H8 165 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 SAP25Q8TEE9 199 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 OR8B2Q96RD0 313 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 RPH3ALQ9UNE2 315 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 NCOR1O75376 2440 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 C9JCJ5 164 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 SPINT2O43291 252 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 HLA-DQA1P01909 254 aa13.72□□□□□ -0.21
PKP4-204ENST00000421462 IGKV3D-15A0A087WSY6 115 aa13.71□□□□□ -0.21
PKP4-204ENST00000421462 GGTLC3B5MD39 225 aa13.71□□□□□ -0.21
PKP4-204ENST00000421462 IGHV3-48P01763 117 aa13.71□□□□□ -0.21
PKP4-204ENST00000421462 RAB30Q15771 203 aa13.71□□□□□ -0.21
PKP4-204ENST00000421462 OR2T6Q8NHC8 308 aa13.71□□□□□ -0.21
PKP4-204ENST00000421462 S1PR3Q99500 378 aa13.71□□□□□ -0.21
PKP4-204ENST00000421462 NABP2Q9BQ15 211 aa13.71□□□□□ -0.21
PKP4-204ENST00000421462 TRAV5A0A0B4J249 113 aa13.71□□□□□ -0.22
PKP4-204ENST00000421462 hDV102S1A0JD36 115 aa13.71□□□□□ -0.22
PKP4-204ENST00000421462 PLXNB1O43157 2135 aa13.71□□□□□ -0.22
PKP4-204ENST00000421462 PSG1P11464 419 aa13.71□□□□□ -0.22
PKP4-204ENST00000421462 CA7P43166 264 aa13.71□□□□□ -0.22
PKP4-204ENST00000421462 VDAC2P45880 294 aaPredicted RBP13.71□□□□□ -0.22
PKP4-204ENST00000421462 VHLLQ6RSH7 139 aa13.71□□□□□ -0.22
PKP4-204ENST00000421462 DEFB127Q9H1M4 99 aa13.71□□□□□ -0.22
PKP4-204ENST00000421462 TNRC6BQ9UPQ9 1833 aaKnown RBP13.71□□□□□ -0.22
PKP4-204ENST00000421462 FAM181BA6NEQ2 426 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 PATE3B3GLJ2 98 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 NUDT3O95989 172 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 SLC35E4Q6ICL7 350 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 SPATA12Q7Z6I5 190 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 LHFPL4Q7Z7J7 247 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 OR2D3Q8NGH3 330 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 TRAV9-2A0A087WT02 112 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 SMPD2O60906 423 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 AGFG2O95081 481 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 ARG2P78540 354 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 NEUROG1Q92886 237 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 PMCHL2Q9BQD1 86 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 TANC2Q9HCD6 1990 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 OR2T8A6NH00 312 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 CDKN1BP46527 198 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 TMEM249Q2WGJ8 235 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 OR4A47Q6IF82 309 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 C19orf35Q6ZS72 473 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 SPACA3Q8IXA5 215 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 OR52E5Q8NH55 327 aa13.7□□□□□ -0.22
PKP4-204ENST00000421462 IGHV3OR15-7A0A075B7D8 119 aa13.69□□□□□ -0.22
PKP4-204ENST00000421462 SNAI2O43623 268 aa13.69□□□□□ -0.22
PKP4-204ENST00000421462 UBE2G1P62253 170 aa13.69□□□□□ -0.22
PKP4-204ENST00000421462 ZNF841Q6ZN19 808 aa13.69□□□□□ -0.22
PKP4-204ENST00000421462 TPRP12270 2363 aaKnown RBP13.69□□□□□ -0.22
PKP4-204ENST00000421462 IGHV2-26A0A0B4J1V2 119 aa13.69□□□□□ -0.22
PKP4-204ENST00000421462 ITGB1BP1O14713 200 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 ZNF134P52741 427 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 LINC00173Q6ZV60 143 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 C11orf52Q96A22 123 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 B4GALT7Q9UBV7 327 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 LSM4Q9Y4Z0 139 aaKnown RBP13.68□□□□□ -0.22
PKP4-204ENST00000421462 CEP250Q9BV73 2442 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 IGLC7A0M8Q6 106 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 PRSS46E5RG02 174 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 CORTO00230 105 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 PRB4P10163 310 aaPredicted RBP13.68□□□□□ -0.22
PKP4-204ENST00000421462 TCTAP57738 103 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 SELENOVP59797 346 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 FAM214BQ7L5A3 538 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 TTTY12Q9BZ98 90 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 OSTCQ9NRP0 149 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 NAV3Q8IVL0 2385 aa13.68□□□□□ -0.22
PKP4-204ENST00000421462 PLAUP00749 431 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 AREGP15514 252 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 GDF5OSQ5U4N7 250 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 ABHD17BQ5VST6 288 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 MRPS17Q9Y2R5 130 aaKnown RBP13.67□□□□□ -0.22
PKP4-204ENST00000421462 MRPS16Q9Y3D3 137 aaKnown RBP13.67□□□□□ -0.22
PKP4-204ENST00000421462 IGHV2-70DA0A0C4DH43 119 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 TIMM8AO60220 97 aaPredicted RBP13.67□□□□□ -0.22
PKP4-204ENST00000421462 CXCL12P48061 93 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 MRPL49Q13405 166 aaKnown RBP13.67□□□□□ -0.22
PKP4-204ENST00000421462 MORN5Q5VZ52 161 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 AMMECR1LQ6DCA0 310 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 ACP7Q6ZNF0 438 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 TMEM251Q8N6I4 163 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 OR9G1Q8NH87 305 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 KLF14Q8TD94 323 aaPredicted RBP13.67□□□□□ -0.22
PKP4-204ENST00000421462 NANOS1Q8WY41 292 aaKnown RBP13.67□□□□□ -0.22
PKP4-204ENST00000421462 DUSP13Q9UII6 198 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 OR4C46A6NHA9 309 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 TOMM40O96008 361 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 C1orf229Q6ZS94 237 aaPredicted RBP13.67□□□□□ -0.22
PKP4-204ENST00000421462 OR4F17Q8NGA8 305 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 ZNF503Q96F45 646 aa13.67□□□□□ -0.22
PKP4-204ENST00000421462 GPR179Q6PRD1 2367 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms