RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 MZT1Q08AG7 82 aa12.46□□□□□ -0.41
SEMA3B-203ENST00000419007 MLANAQ16655 118 aa12.46□□□□□ -0.41
SEMA3B-203ENST00000419007 MRPL54Q6P161 138 aaKnown RBP12.46□□□□□ -0.41
SEMA3B-203ENST00000419007 CEP295Q9C0D2 2601 aa12.46□□□□□ -0.41
SEMA3B-203ENST00000419007 SPENQ96T58 3664 aaKnown RBP12.46□□□□□ -0.41
SEMA3B-203ENST00000419007 DSCAMO60469 2012 aa12.46□□□□□ -0.41
SEMA3B-203ENST00000419007 TPRP12270 2363 aaKnown RBP12.46□□□□□ -0.42
SEMA3B-203ENST00000419007 J3QR06 171 aa12.46□□□□□ -0.42
SEMA3B-203ENST00000419007 PMCHP20382 165 aa12.46□□□□□ -0.42
SEMA3B-203ENST00000419007 SELENOTP62341 195 aa12.46□□□□□ -0.42
SEMA3B-203ENST00000419007 SUMO1P63165 101 aaKnown RBP12.46□□□□□ -0.42
SEMA3B-203ENST00000419007 NHLRC2Q8NBF2 726 aa12.46□□□□□ -0.42
SEMA3B-203ENST00000419007 ZNRD1Q9P1U0 126 aa12.46□□□□□ -0.42
SEMA3B-203ENST00000419007 TIGITQ495A1 244 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 ITLN1Q8WWA0 313 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 SPTBN4Q9H254 2564 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 TRGV10A0A0A0MS01 117 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 RAB4AP20338 218 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 KIR2DS2P43631 304 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 TMEM183BQ1AE95 376 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 TPTE2P1Q5T6R2 138 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 GNB4Q9HAV0 340 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 IDI2-AS1Q9NZ38 188 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 ABCA1O95477 2261 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 TRGV8A0A0C4DH27 118 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 IRF2P14316 349 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 DEFB124Q8NES8 71 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 RND1Q92730 232 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 IL19Q9UHD0 177 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 PROCRQ9UNN8 238 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 V9GYV3 84 aa12.45□□□□□ -0.42
SEMA3B-203ENST00000419007 F2RL2O00254 374 aa12.44□□□□□ -0.42
SEMA3B-203ENST00000419007 AMTP48728 403 aa12.44□□□□□ -0.42
SEMA3B-203ENST00000419007 RAB7AP51149 207 aa12.44□□□□□ -0.42
SEMA3B-203ENST00000419007 MBNL2Q5VZF2 373 aaKnown RBP12.44□□□□□ -0.42
SEMA3B-203ENST00000419007 BHLHA15Q7RTS1 189 aaPredicted RBP12.44□□□□□ -0.42
SEMA3B-203ENST00000419007 DDB2Q92466 427 aa12.44□□□□□ -0.42
SEMA3B-203ENST00000419007 SLC45A2Q9UMX9 530 aa12.44□□□□□ -0.42
SEMA3B-203ENST00000419007 TMEM14BQ9NUH8 114 aa12.44□□□□□ -0.42
SEMA3B-203ENST00000419007 PKDREJQ9NTG1 2253 aa12.44□□□□□ -0.42
SEMA3B-203ENST00000419007 SPAARA0A1B0GVQ0 90 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 C9JCJ5 164 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 CA1P00915 261 aaPredicted RBP12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 IGKV1-16P04430 117 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 LINC00869P0C866 280 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 PRR20EP86478 221 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 PRR20CP86479 221 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 PRR20DP86480 221 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 PRR20BP86481 221 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 PRR20AP86496 221 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 C17orf58Q2M2W7 97 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 OR9G1Q8NH87 305 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 C11orf52Q96A22 123 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 SARAFQ96BY9 339 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 FOXA2Q9Y261 457 aaPredicted RBP12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 ZNF253O75346 499 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 TNFSF13O75888 250 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 C1orf162Q8NEQ5 155 aaPredicted RBP12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 CORO2AQ92828 525 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 MIEN1Q9BRT3 115 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 TMEM167BQ9NRX6 74 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 ZNF586Q9NXT0 402 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 TECRQ9NZ01 308 aaKnown RBP12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 RNF114Q9Y508 228 aa12.43□□□□□ -0.42
SEMA3B-203ENST00000419007 IGKV1OR2-108A0A075B7D4 117 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 RPL19P84098 196 aaKnown RBP12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 FBXL7Q9UJT9 491 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 TBL2Q9Y4P3 447 aaKnown RBP12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 PCNX1Q96RV3 2341 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 KBTBD11-OT1A0A1B0GTJ5 212 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 IGLV1-44P01699 117 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 IGHG3P01860 377 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 RPLP1P05386 114 aaKnown RBP12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 AREGP15514 252 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 KLF3P57682 345 aaPredicted RBP12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 GUSBP1Q15486 140 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 OR10W1Q8NGF6 305 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 SNRNP40Q96DI7 357 aaKnown RBP12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 ZNF71Q9NQZ8 489 aaPredicted RBP12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 NAV3Q8IVL0 2385 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 DIRC3C9JPN6 131 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 IGHV3-48P01763 117 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 NTF3P20783 257 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 BRS3P32247 399 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 TEX43Q6ZNM6 134 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 CCL13Q99616 98 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 SSBP3Q9BWW4 388 aaPredicted RBP12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 CHODLQ9H9P2 273 aa12.42□□□□□ -0.42
SEMA3B-203ENST00000419007 TRAV9-1A0A075B6T8 112 aa12.41□□□□□ -0.42
SEMA3B-203ENST00000419007 GGTLC3B5MD39 225 aa12.41□□□□□ -0.42
SEMA3B-203ENST00000419007 MMP23AO75900 390 aa12.41□□□□□ -0.42
SEMA3B-203ENST00000419007 SRIP30626 198 aa12.41□□□□□ -0.42
SEMA3B-203ENST00000419007 MAJINQ3KP22 176 aa12.41□□□□□ -0.42
SEMA3B-203ENST00000419007 NEUROG1Q92886 237 aa12.41□□□□□ -0.42
SEMA3B-203ENST00000419007 RCHY1Q96PM5 261 aa12.41□□□□□ -0.42
SEMA3B-203ENST00000419007 SLC35D1Q9NTN3 355 aa12.41□□□□□ -0.42
SEMA3B-203ENST00000419007 PLXNB1O43157 2135 aa12.41□□□□□ -0.42
SEMA3B-203ENST00000419007 IBA57Q5T440 356 aaKnown RBP12.41□□□□□ -0.42
SEMA3B-203ENST00000419007 STARD4Q96DR4 205 aa12.41□□□□□ -0.42
SEMA3B-203ENST00000419007 LINC00479Q96M42 142 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms