RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 OR2J3O76001 311 aa13.71□□□□□ -0.21
VCP-202ENST00000417448 CDS2O95674 445 aa13.71□□□□□ -0.21
VCP-202ENST00000417448 P0C879 139 aa13.71□□□□□ -0.21
VCP-202ENST00000417448 TRAPPC2P0DI81 140 aa13.71□□□□□ -0.21
VCP-202ENST00000417448 TRAPPC2BP0DI82 140 aa13.71□□□□□ -0.21
VCP-202ENST00000417448 PSMB6P28072 239 aa13.71□□□□□ -0.21
VCP-202ENST00000417448 Q8N1Y9 231 aa13.71□□□□□ -0.21
VCP-202ENST00000417448 OR1L8Q8NGR8 309 aa13.71□□□□□ -0.21
VCP-202ENST00000417448 RNASE11Q8TAA1 199 aaKnown RBP13.71□□□□□ -0.21
VCP-202ENST00000417448 DCUN1D4Q92564 292 aa13.71□□□□□ -0.21
VCP-202ENST00000417448 TMEM68Q96MH6 324 aa13.71□□□□□ -0.21
VCP-202ENST00000417448 C19orf73Q9NVV2 129 aa13.71□□□□□ -0.21
VCP-202ENST00000417448 IGHV4OR15-8A0A075B7B6 117 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 A0A087WW49 117 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 NAP1L6A6NFF2 107 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 C15orf61A6NNL5 157 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 NDUFB8O95169 186 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 IGHV3-23P01764 117 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 OR13C7P0DN81 318 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 RHOGP84095 191 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 DHODHQ02127 395 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 WT1-ASQ06250 92 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 ZNF616Q08AN1 781 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 GPR146Q96CH1 333 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 SLC25A21Q9BQT8 299 aaPredicted RBP13.7□□□□□ -0.22
VCP-202ENST00000417448 NDUFA4L2Q9NRX3 87 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 TMEM14BQ9NUH8 114 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 PRNDQ9UKY0 176 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 KCNIP3Q9Y2W7 256 aa13.7□□□□□ -0.22
VCP-202ENST00000417448 C13orf42A0A1B0GVH6 325 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 CENPXA8MT69 81 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 OVOL1O14753 267 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 LYRM1O43325 122 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 NDUFB6O95139 128 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 NXPH3O95157 252 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 TRBV12-3P01733 135 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 LGALS1P09382 135 aaKnown RBP13.69□□□□□ -0.22
VCP-202ENST00000417448 CTRB1P17538 263 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 VAMP1P23763 118 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 MECP2P51608 486 aaKnown RBP13.69□□□□□ -0.22
VCP-202ENST00000417448 SLURP1P55000 103 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 IFITM3Q01628 133 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 PPP1R1AQ13522 171 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 ZNF846Q147U1 533 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 RBMS2Q15434 407 aaKnown RBP13.69□□□□□ -0.22
VCP-202ENST00000417448 ANKRD55Q3KP44 614 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 CTRB2Q6GPI1 263 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 LINC00299Q6ZSB3 139 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 LYZL2Q7Z4W2 148 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 CENPSQ8N2Z9 138 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 FANCD2OSQ96PS1 177 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 SPATA25Q9BR10 227 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 SLA2Q9H6Q3 261 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 DMRT1Q9Y5R6 373 aa13.69□□□□□ -0.22
VCP-202ENST00000417448 NPIPB5A8MRT5 1133 aa13.68□□□□□ -0.22
VCP-202ENST00000417448 ST8SIA3O43173 380 aa13.68□□□□□ -0.22
VCP-202ENST00000417448 ANXA7P20073 488 aaKnown RBP13.68□□□□□ -0.22
VCP-202ENST00000417448 RUNX1Q01196 453 aa13.68□□□□□ -0.22
VCP-202ENST00000417448 SLC35G3Q8N808 338 aa13.68□□□□□ -0.22
VCP-202ENST00000417448 DEDD2Q8WXF8 326 aa13.68□□□□□ -0.22
VCP-202ENST00000417448 DLX4Q92988 240 aaPredicted RBP13.68□□□□□ -0.22
VCP-202ENST00000417448 RBPMSQ93062 196 aaKnown RBP13.68□□□□□ -0.22
VCP-202ENST00000417448 RRNAD1Q96FB5 475 aaKnown RBP13.68□□□□□ -0.22
VCP-202ENST00000417448 GALNT14Q96FL9 552 aa13.68□□□□□ -0.22
VCP-202ENST00000417448 TMEM56Q96MV1 263 aa13.68□□□□□ -0.22
VCP-202ENST00000417448 TSC22D3Q99576 134 aa13.68□□□□□ -0.22
VCP-202ENST00000417448 CCDC32Q9BV29 185 aa13.68□□□□□ -0.22
VCP-202ENST00000417448 FBXL7Q9UJT9 491 aa13.68□□□□□ -0.22
VCP-202ENST00000417448 TBC1D24Q9ULP9 559 aa13.68□□□□□ -0.22
VCP-202ENST00000417448 ZNF257Q9Y2Q1 563 aa13.68□□□□□ -0.22
VCP-202ENST00000417448 TMEM56-RWDD3S4R434 201 aa13.68□□□□□ -0.22
VCP-202ENST00000417448 TRBV9A0A0B4J1U6 114 aa13.67□□□□□ -0.22
VCP-202ENST00000417448 IGHV3-21A0A0B4J1V1 117 aa13.67□□□□□ -0.22
VCP-202ENST00000417448 A8MZ25 164 aa13.67□□□□□ -0.22
VCP-202ENST00000417448 H3BUA1 57 aa13.67□□□□□ -0.22
VCP-202ENST00000417448 CRYGCP07315 174 aa13.67□□□□□ -0.22
VCP-202ENST00000417448 DEFA4P12838 97 aa13.67□□□□□ -0.22
VCP-202ENST00000417448 MFAP2P55001 183 aa13.67□□□□□ -0.22
VCP-202ENST00000417448 SLC25A42Q86VD7 318 aa13.67□□□□□ -0.22
VCP-202ENST00000417448 C7orf50Q9BRJ6 194 aaKnown RBP13.67□□□□□ -0.22
VCP-202ENST00000417448 DNAH10Q8IVF4 4471 aa13.66□□□□□ -0.22
VCP-202ENST00000417448 B3GALNT1O75752 331 aa13.66□□□□□ -0.22
VCP-202ENST00000417448 HSPE1P61604 102 aaKnown RBP13.66□□□□□ -0.22
VCP-202ENST00000417448 ATP5G2Q06055 141 aa13.66□□□□□ -0.22
VCP-202ENST00000417448 TMEM128Q5BJH2 165 aa13.66□□□□□ -0.22
VCP-202ENST00000417448 HAPLN4Q86UW8 402 aa13.66□□□□□ -0.22
VCP-202ENST00000417448 CADM3Q8N126 398 aa13.66□□□□□ -0.22
VCP-202ENST00000417448 WDR12Q9GZL7 423 aaKnown RBP13.66□□□□□ -0.22
VCP-202ENST00000417448 FKBP11Q9NYL4 201 aa13.66□□□□□ -0.22
VCP-202ENST00000417448 CACNG5Q9UF02 275 aa13.66□□□□□ -0.22
VCP-202ENST00000417448 TRAV6A0A075B6T7 132 aa13.65□□□□□ -0.22
VCP-202ENST00000417448 A0A0G2JLM5 398 aa13.65□□□□□ -0.22
VCP-202ENST00000417448 ATG12O94817 140 aa13.65□□□□□ -0.22
VCP-202ENST00000417448 SFT2D2O95562 160 aa13.65□□□□□ -0.22
VCP-202ENST00000417448 IFNA17P01571 189 aa13.65□□□□□ -0.22
VCP-202ENST00000417448 EXOSC2Q13868 293 aaKnown RBP13.65□□□□□ -0.22
VCP-202ENST00000417448 HAGHQ16775 308 aa13.65□□□□□ -0.22
VCP-202ENST00000417448 C15orf32Q32M92 178 aa13.65□□□□□ -0.22
VCP-202ENST00000417448 SLC25A24Q6NUK1 477 aa13.65□□□□□ -0.22
VCP-202ENST00000417448 ACSM6Q6P461 480 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms