RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 CCDC71LQ8N9Z2 235 aa11.81□□□□□ -0.52
ITGB1-204ENST00000417122 OR13C8Q8NGS7 320 aa11.81□□□□□ -0.52
ITGB1-204ENST00000417122 MARCH1Q8TCQ1 289 aa11.81□□□□□ -0.52
ITGB1-204ENST00000417122 CACNG8Q8WXS5 425 aa11.81□□□□□ -0.52
ITGB1-204ENST00000417122 ISOC1Q96CN7 298 aa11.81□□□□□ -0.52
ITGB1-204ENST00000417122 SLIRPQ9GZT3 109 aaKnown RBP11.81□□□□□ -0.52
ITGB1-204ENST00000417122 ZMAT4Q9H898 229 aa11.81□□□□□ -0.52
ITGB1-204ENST00000417122 IGHV3-21A0A0B4J1V1 117 aa11.8□□□□□ -0.52
ITGB1-204ENST00000417122 ZNF785A8K8V0 405 aa11.8□□□□□ -0.52
ITGB1-204ENST00000417122 DISC1C4P0D8 188 aa11.8□□□□□ -0.52
ITGB1-204ENST00000417122 TGOLN2O43493 480 aa11.8□□□□□ -0.52
ITGB1-204ENST00000417122 CTSDP07339 412 aaPredicted RBP11.8□□□□□ -0.52
ITGB1-204ENST00000417122 HSPE1P61604 102 aaKnown RBP11.8□□□□□ -0.52
ITGB1-204ENST00000417122 PRCDQ00LT1 54 aa11.8□□□□□ -0.52
ITGB1-204ENST00000417122 UNQ9165/PRO28630Q6UXU0 137 aa11.8□□□□□ -0.52
ITGB1-204ENST00000417122 UXS1Q8NBZ7 420 aa11.8□□□□□ -0.52
ITGB1-204ENST00000417122 SCARB1Q8WTV0 552 aa11.8□□□□□ -0.52
ITGB1-204ENST00000417122 RCHY1Q96PM5 261 aa11.8□□□□□ -0.52
ITGB1-204ENST00000417122 PALMDQ9NP74 551 aa11.8□□□□□ -0.52
ITGB1-204ENST00000417122 C21orf62Q9NYP8 219 aa11.8□□□□□ -0.52
ITGB1-204ENST00000417122 IGHV3-35A0A0C4DH35 117 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 OR2T8A6NH00 312 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 ATG12O94817 140 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 IGKV1-5P01602 117 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 AKAIN1P0CW23 69 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 AKR1C2P52895 323 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 CD81P60033 236 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 GUCA2BQ16661 112 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 IZUMO4Q1ZYL8 232 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 TRIM16LQ309B1 348 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 SP6Q3SY56 376 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 TM4SF20Q53R12 229 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 OR2C3Q8N628 320 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 OR4C16Q8NGL9 310 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 OR1P1Q8NH06 330 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 BSCL2Q96G97 398 aaPredicted RBP11.79□□□□□ -0.52
ITGB1-204ENST00000417122 ATP6V0BQ99437 205 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 ZNF436Q9C0F3 470 aaPredicted RBP11.79□□□□□ -0.52
ITGB1-204ENST00000417122 TUBA4BQ9H853 241 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 SLC2A8Q9NY64 477 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 C14orf166Q9Y224 244 aaKnown RBP11.79□□□□□ -0.52
ITGB1-204ENST00000417122 SELENOKQ9Y6D0 94 aa11.79□□□□□ -0.52
ITGB1-204ENST00000417122 K7EIM0 57 aa11.78□□□□□ -0.52
ITGB1-204ENST00000417122 P0C879 139 aa11.78□□□□□ -0.52
ITGB1-204ENST00000417122 UCP1P25874 307 aa11.78□□□□□ -0.52
ITGB1-204ENST00000417122 ERHP84090 104 aaKnown RBP11.78□□□□□ -0.52
ITGB1-204ENST00000417122 ZNF57Q68EA5 555 aaPredicted RBP11.78□□□□□ -0.52
ITGB1-204ENST00000417122 SPSB3Q6PJ21 355 aa11.78□□□□□ -0.52
ITGB1-204ENST00000417122 UBAC2Q8NBM4 344 aa11.78□□□□□ -0.52
ITGB1-204ENST00000417122 ZNF114Q8NC26 417 aa11.78□□□□□ -0.52
ITGB1-204ENST00000417122 MCFD2Q8NI22 146 aa11.78□□□□□ -0.52
ITGB1-204ENST00000417122 WDR89Q96FK6 387 aaPredicted RBP11.78□□□□□ -0.52
ITGB1-204ENST00000417122 NEURL2Q9BR09 285 aa11.78□□□□□ -0.52
ITGB1-204ENST00000417122 TM2D3Q9BRN9 247 aa11.78□□□□□ -0.52
ITGB1-204ENST00000417122 NXF2Q9GZY0 626 aaKnown RBP11.78□□□□□ -0.52
ITGB1-204ENST00000417122 PLEKHA3Q9HB20 300 aa11.78□□□□□ -0.52
ITGB1-204ENST00000417122 MLXQ9UH92 298 aa11.78□□□□□ -0.52
ITGB1-204ENST00000417122 RSL24D1Q9UHA3 163 aaKnown RBP11.78□□□□□ -0.52
ITGB1-204ENST00000417122 UFC1Q9Y3C8 167 aa11.78□□□□□ -0.52
ITGB1-204ENST00000417122 CEPT1Q9Y6K0 416 aa11.78□□□□□ -0.52
ITGB1-204ENST00000417122 HUWE1Q7Z6Z7 4374 aaKnown RBP11.78□□□□□ -0.52
ITGB1-204ENST00000417122 A0A0B4J293 547 aa11.77□□□□□ -0.53
ITGB1-204ENST00000417122 FABP12A6NFH5 140 aa11.77□□□□□ -0.53
ITGB1-204ENST00000417122 F8W735 103 aaPredicted RBP11.77□□□□□ -0.53
ITGB1-204ENST00000417122 GSTZ1O43708 216 aaPredicted RBP11.77□□□□□ -0.53
ITGB1-204ENST00000417122 B3GALNT1O75752 331 aa11.77□□□□□ -0.53
ITGB1-204ENST00000417122 CD7P09564 240 aa11.77□□□□□ -0.53
ITGB1-204ENST00000417122 C8orf88P0DMB2 117 aa11.77□□□□□ -0.53
ITGB1-204ENST00000417122 TNFSF8P32971 234 aa11.77□□□□□ -0.53
ITGB1-204ENST00000417122 ELLP55199 621 aaPredicted RBP11.77□□□□□ -0.53
ITGB1-204ENST00000417122 SURF2Q15527 256 aaPredicted RBP11.77□□□□□ -0.53
ITGB1-204ENST00000417122 Q56UQ5 140 aa11.77□□□□□ -0.53
ITGB1-204ENST00000417122 MARC2Q969Z3 335 aa11.77□□□□□ -0.53
ITGB1-204ENST00000417122 MISP3Q96FF7 219 aa11.77□□□□□ -0.53
ITGB1-204ENST00000417122 RTBDNQ9BSG5 229 aaPredicted RBP11.77□□□□□ -0.53
ITGB1-204ENST00000417122 MRPL27Q9P0M9 148 aaKnown RBP11.77□□□□□ -0.53
ITGB1-204ENST00000417122 TEX13DA0A0J9YY54 714 aaPredicted RBP11.76□□□□□ -0.53
ITGB1-204ENST00000417122 ANKRD20A5PA0PJZ0 165 aa11.76□□□□□ -0.53
ITGB1-204ENST00000417122 CCDC160A6NGH7 325 aa11.76□□□□□ -0.53
ITGB1-204ENST00000417122 OR5AC1P0C628 307 aa11.76□□□□□ -0.53
ITGB1-204ENST00000417122 SPINK9Q5DT21 86 aa11.76□□□□□ -0.53
ITGB1-204ENST00000417122 BTNL8Q6UX41 500 aa11.76□□□□□ -0.53
ITGB1-204ENST00000417122 TMEM61Q8N0U2 210 aa11.76□□□□□ -0.53
ITGB1-204ENST00000417122 RNASE11Q8TAA1 199 aaKnown RBP11.76□□□□□ -0.53
ITGB1-204ENST00000417122 TMEM190Q8WZ59 177 aa11.76□□□□□ -0.53
ITGB1-204ENST00000417122 RRNAD1Q96FB5 475 aaKnown RBP11.76□□□□□ -0.53
ITGB1-204ENST00000417122 PRRT1Q99946 306 aa11.76□□□□□ -0.53
ITGB1-204ENST00000417122 SOSTQ9BQB4 213 aa11.76□□□□□ -0.53
ITGB1-204ENST00000417122 CHRDL1Q9BU40 450 aa11.76□□□□□ -0.53
ITGB1-204ENST00000417122 PDCD10Q9BUL8 212 aa11.76□□□□□ -0.53
ITGB1-204ENST00000417122 C5orf66Q9H5L9 145 aa11.76□□□□□ -0.53
ITGB1-204ENST00000417122 NAA60Q9H7X0 242 aa11.76□□□□□ -0.53
ITGB1-204ENST00000417122 GPR132Q9UNW8 380 aa11.76□□□□□ -0.53
ITGB1-204ENST00000417122 I3L2K1 104 aa11.75□□□□□ -0.53
ITGB1-204ENST00000417122 NDUFA4O00483 81 aa11.75□□□□□ -0.53
ITGB1-204ENST00000417122 ST8SIA3O43173 380 aa11.75□□□□□ -0.53
ITGB1-204ENST00000417122 IFNA17P01571 189 aa11.75□□□□□ -0.53
ITGB1-204ENST00000417122 ADMP35318 185 aa11.75□□□□□ -0.53
ITGB1-204ENST00000417122 MFAP4P55083 255 aa11.75□□□□□ -0.53
ITGB1-204ENST00000417122 HAGHQ16775 308 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms