RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	C13orf42	A0A1B0GVH6	325 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	FAM223B	A6NKX1	122 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	NUDT19	A8MXV4	375 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	FAM90A26	D6RGX4	464 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	PITX3	O75364	302 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	MED6	O75586	246 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	NXPH3	O95157	252 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	SNCA	P37840	140 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	CDX1	P47902	265 aa	Predicted RBP	10.25	□□□□□ -0.77
SF1-206	ENST00000413725	TATDN3	Q17R31	274 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	C2orf68	Q2NKX9	166 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	FAM223A	Q8IWN6	122 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	OR2C3	Q8N628	320 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	KLHL30-AS1	Q8NEE0	82 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	OR1L6	Q8NGR2	347 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	MYOZ3	Q8TDC0	251 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	UBE2E2	Q96LR5	201 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	KRTAP3-3	Q9BYR6	98 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	KRTAP3-2	Q9BYR7	98 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	THYN1	Q9P016	225 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	HSPB7	Q9UBY9	170 aa		10.25	□□□□□ -0.77
SF1-206	ENST00000413725	C5orf51	A6NDU8	294 aa		10.24	□□□□□ -0.77
SF1-206	ENST00000413725	FAM25E	A8MYX2	175 aa		10.24	□□□□□ -0.77
SF1-206	ENST00000413725	INS-IGF2	F8WCM5	200 aa		10.24	□□□□□ -0.77
SF1-206	ENST00000413725		M0QZ24	198 aa		10.24	□□□□□ -0.77
SF1-206	ENST00000413725	PRH1	P02810	166 aa		10.24	□□□□□ -0.77
SF1-206	ENST00000413725	SUB1	P53999	127 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
SF1-206	ENST00000413725	RHOG	P84095	191 aa		10.24	□□□□□ -0.77
SF1-206	ENST00000413725	IAH1	Q2TAA2	248 aa	Predicted RBP	10.24	□□□□□ -0.77
SF1-206	ENST00000413725	HIST2H2BD	Q6DRA6	164 aa		10.24	□□□□□ -0.77
SF1-206	ENST00000413725	ZNF491	Q8N8L2	437 aa		10.24	□□□□□ -0.77
SF1-206	ENST00000413725	ZNF114	Q8NC26	417 aa		10.24	□□□□□ -0.77
SF1-206	ENST00000413725	NECAP1	Q8NC96	275 aa		10.24	□□□□□ -0.77
SF1-206	ENST00000413725	USMG5	Q96IX5	58 aa		10.24	□□□□□ -0.77
SF1-206	ENST00000413725	HIPK2	Q9H2X6	1198 aa		10.24	□□□□□ -0.77
SF1-206	ENST00000413725	HEYL	Q9NQ87	328 aa	Predicted RBP	10.24	□□□□□ -0.77
SF1-206	ENST00000413725	F11R	Q9Y624	299 aa	Known RBP	10.24	□□□□□ -0.77
SF1-206	ENST00000413725	IGLV11-55	A0A075B6I3	123 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	TRBV9	A0A0B4J1U6	114 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	C7orf66	A4D0T2	115 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	ADARB2-AS1	A8MUL3	147 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	MPTX1	A8MV57	137 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	CCS	O14618	274 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	SSNA1	O43805	119 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	OR2J3	O76001	311 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	OXA1L	Q15070	435 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	SLC25A24	Q6NUK1	477 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	GSG1L	Q6UXU4	331 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	C19orf35	Q6ZS72	473 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	OR4F17	Q8NGA8	305 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	OR1P1	Q8NH06	330 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	DTD1	Q8TEA8	209 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	C4orf3	Q8WVX3	66 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	OR10C1	Q96KK4	312 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	OR4F4	Q96R69	305 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	P2RX4	Q99571	388 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	RBKS	Q9H477	322 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	FBXL7	Q9UJT9	491 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	ANK2	Q01484	3957 aa		10.23	□□□□□ -0.77
SF1-206	ENST00000413725	WRB	O00258	174 aa		10.22	□□□□□ -0.77
SF1-206	ENST00000413725	HTR2B	P41595	481 aa		10.22	□□□□□ -0.77
SF1-206	ENST00000413725	NKX2-1	P43699	371 aa	Predicted RBP	10.22	□□□□□ -0.77
SF1-206	ENST00000413725	ATP5G2	Q06055	141 aa		10.22	□□□□□ -0.77
SF1-206	ENST00000413725	KIAA0141	Q14154	515 aa	Predicted RBP	10.22	□□□□□ -0.77
SF1-206	ENST00000413725	KLK9	Q2XQG4	91 aa		10.22	□□□□□ -0.77
SF1-206	ENST00000413725	C15orf32	Q32M92	178 aa		10.22	□□□□□ -0.77
SF1-206	ENST00000413725	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.22	□□□□□ -0.77
SF1-206	ENST00000413725	OR4D5	Q8NGN0	318 aa		10.22	□□□□□ -0.77
SF1-206	ENST00000413725	C2orf50	Q96LR7	162 aa		10.22	□□□□□ -0.77
SF1-206	ENST00000413725	FANCD2OS	Q96PS1	177 aa		10.22	□□□□□ -0.77
SF1-206	ENST00000413725	CIB3	Q96Q77	187 aa	Predicted RBP	10.22	□□□□□ -0.77
SF1-206	ENST00000413725	GNB4	Q9HAV0	340 aa		10.22	□□□□□ -0.77
SF1-206	ENST00000413725	GSKIP	Q9P0R6	139 aa		10.22	□□□□□ -0.77
SF1-206	ENST00000413725	KLK9	Q9UKQ9	250 aa		10.22	□□□□□ -0.77
SF1-206	ENST00000413725	ALG5	Q9Y673	324 aa		10.22	□□□□□ -0.77
SF1-206	ENST00000413725	CORT	O00230	105 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	GOSR2	O14653	212 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	SYNGR2	O43760	224 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	LY86	O95711	162 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	SCGB1D2	O95969	90 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	IGHV3-11	P01762	117 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	LGALS1	P09382	135 aa	Known RBP	10.21	□□□□□ -0.77
SF1-206	ENST00000413725	DEFA5	Q01523	94 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	ID3	Q02535	119 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	EXOSC2	Q13868	293 aa	Known RBP	10.21	□□□□□ -0.77
SF1-206	ENST00000413725	FAM209B	Q5JX69	171 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	C18orf65	Q6ZTR6	163 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	C8orf86	Q6ZUL3	223 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	NOXA1	Q86UR1	476 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	SLC24A4	Q8NFF2	622 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	MISP3	Q96FF7	219 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	CXorf58	Q96LI9	332 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	OR5B12	Q96R08	314 aa		10.21	□□□□□ -0.77
SF1-206	ENST00000413725	NDUFB8	O95169	186 aa		10.2	□□□□□ -0.78
SF1-206	ENST00000413725	IFNA10	P01566	189 aa		10.2	□□□□□ -0.78
SF1-206	ENST00000413725	PF4	P02776	101 aa		10.2	□□□□□ -0.78
SF1-206	ENST00000413725	RNASE2	P10153	161 aa	Known RBP	10.2	□□□□□ -0.78
SF1-206	ENST00000413725	RUNX1	Q01196	453 aa		10.2	□□□□□ -0.78
SF1-206	ENST00000413725	EEF1AKMT3	Q96AZ1	226 aa		10.2	□□□□□ -0.78
SF1-206	ENST00000413725	MAGT1	Q9H0U3	335 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms