RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 GGTLC3B5MD39 225 aa14.45□□□□□ -0.1
SDCBP-202ENST00000413219 IGLC2P0DOY2 106 aa14.45□□□□□ -0.1
SDCBP-202ENST00000413219 IGLC3P0DOY3 106 aa14.45□□□□□ -0.1
SDCBP-202ENST00000413219 SRIP30626 198 aa14.45□□□□□ -0.1
SDCBP-202ENST00000413219 NIT1Q86X76 327 aa14.45□□□□□ -0.1
SDCBP-202ENST00000413219 KLHDC1Q8N7A1 406 aa14.45□□□□□ -0.1
SDCBP-202ENST00000413219 WIPF2Q8TF74 440 aaPredicted RBP14.45□□□□□ -0.1
SDCBP-202ENST00000413219 RCHY1Q96PM5 261 aa14.45□□□□□ -0.1
SDCBP-202ENST00000413219 PLEKHA3Q9HB20 300 aa14.45□□□□□ -0.1
SDCBP-202ENST00000413219 CDC42EP3Q9UKI2 254 aa14.45□□□□□ -0.1
SDCBP-202ENST00000413219 IGHV2OR16-5A0A0B4J2B6 119 aa14.44□□□□□ -0.1
SDCBP-202ENST00000413219 PMCHP20382 165 aa14.44□□□□□ -0.1
SDCBP-202ENST00000413219 PRCDQ00LT1 54 aa14.44□□□□□ -0.1
SDCBP-202ENST00000413219 FXYD3Q14802 87 aa14.44□□□□□ -0.1
SDCBP-202ENST00000413219 CT45A1Q5HYN5 189 aa14.44□□□□□ -0.1
SDCBP-202ENST00000413219 CT45A3Q8NHU0 189 aa14.44□□□□□ -0.1
SDCBP-202ENST00000413219 AHRRA9YTQ3 701 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 OR7C2O60412 319 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 IGHG3P01860 377 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 C3orf79P0CE67 100 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 SAA2P0DJI9 122 aaPredicted RBP14.43□□□□□ -0.1
SDCBP-202ENST00000413219 KIAA1644Q3SXP7 199 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 OR2Z1Q8NG97 314 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 TRIB1Q96RU8 372 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 MRPL32Q9BYC8 188 aaKnown RBP14.43□□□□□ -0.1
SDCBP-202ENST00000413219 DPRXA6NFQ7 191 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 SPINK4O60575 86 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 HYPMO75409 117 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 IGHV3-13P01766 116 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 IGHV3-7P01780 117 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 APCSP02743 223 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 CHRNB4P30926 498 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 C17orf58Q2M2W7 97 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 C2orf83Q53S99 150 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 SLC35D1Q9NTN3 355 aa14.43□□□□□ -0.1
SDCBP-202ENST00000413219 J3QR06 171 aa14.42□□□□□ -0.1
SDCBP-202ENST00000413219 C8orf88P0DMB2 117 aa14.42□□□□□ -0.1
SDCBP-202ENST00000413219 COL8A2P25067 703 aa14.42□□□□□ -0.1
SDCBP-202ENST00000413219 KIR2DL2P43627 348 aaPredicted RBP14.42□□□□□ -0.1
SDCBP-202ENST00000413219 TCL1AP56279 114 aa14.42□□□□□ -0.1
SDCBP-202ENST00000413219 CNEP1R1Q8N9A8 125 aa14.42□□□□□ -0.1
SDCBP-202ENST00000413219 ZNF439Q8NDP4 499 aa14.42□□□□□ -0.1
SDCBP-202ENST00000413219 TSKUQ8WUA8 353 aa14.42□□□□□ -0.1
SDCBP-202ENST00000413219 ZNF331Q9NQX6 463 aaPredicted RBP14.42□□□□□ -0.1
SDCBP-202ENST00000413219 UPK2O00526 184 aa14.42□□□□□ -0.1
SDCBP-202ENST00000413219 MMDQ15546 238 aa14.42□□□□□ -0.1
SDCBP-202ENST00000413219 MRPL54Q6P161 138 aaKnown RBP14.42□□□□□ -0.1
SDCBP-202ENST00000413219 SLC25A33Q9BSK2 321 aa14.42□□□□□ -0.1
SDCBP-202ENST00000413219 HINT2Q9BX68 163 aa14.42□□□□□ -0.1
SDCBP-202ENST00000413219 IGKV1OR2-108A0A075B7D4 117 aa14.41□□□□□ -0.1
SDCBP-202ENST00000413219 IGHV1-18A0A0C4DH31 117 aa14.41□□□□□ -0.1
SDCBP-202ENST00000413219 KBTBD11-OT1A0A1B0GTJ5 212 aa14.41□□□□□ -0.1
SDCBP-202ENST00000413219 HNRNPA3P51991 378 aaKnown RBP14.41□□□□□ -0.1
SDCBP-202ENST00000413219 SELENOVP59797 346 aa14.41□□□□□ -0.1
SDCBP-202ENST00000413219 PMCHL1Q16048 86 aa14.41□□□□□ -0.1
SDCBP-202ENST00000413219 FAM231DQ6ZW35 169 aa14.41□□□□□ -0.1
SDCBP-202ENST00000413219 C11orf42Q8N5U0 333 aa14.41□□□□□ -0.1
SDCBP-202ENST00000413219 ZNRF1Q8ND25 227 aa14.41□□□□□ -0.1
SDCBP-202ENST00000413219 OR1L8Q8NGR8 309 aa14.41□□□□□ -0.1
SDCBP-202ENST00000413219 BORCS7Q96B45 105 aa14.41□□□□□ -0.1
SDCBP-202ENST00000413219 TXN2Q99757 166 aa14.41□□□□□ -0.1
SDCBP-202ENST00000413219 GCM1Q9NP62 436 aa14.41□□□□□ -0.1
SDCBP-202ENST00000413219 LAMTOR2Q9Y2Q5 125 aa14.41□□□□□ -0.1
SDCBP-202ENST00000413219 IGHV3OR15-7A0A075B7D8 119 aa14.4□□□□□ -0.1
SDCBP-202ENST00000413219 SIAH2O43255 324 aa14.4□□□□□ -0.1
SDCBP-202ENST00000413219 MGST1P10620 155 aaKnown RBP14.4□□□□□ -0.1
SDCBP-202ENST00000413219 USF1P22415 310 aaPredicted RBP14.4□□□□□ -0.1
SDCBP-202ENST00000413219 TFPI2P48307 235 aa14.4□□□□□ -0.1
SDCBP-202ENST00000413219 SLC35B1P78383 322 aa14.4□□□□□ -0.1
SDCBP-202ENST00000413219 Q6ZN92 141 aa14.4□□□□□ -0.1
SDCBP-202ENST00000413219 FAM169BQ8N8A8 192 aa14.4□□□□□ -0.1
SDCBP-202ENST00000413219 DMRTA1Q5VZB9 504 aa14.4□□□□□ -0.1
SDCBP-202ENST00000413219 VWA1Q6PCB0 445 aa14.4□□□□□ -0.1
SDCBP-202ENST00000413219 C1orf210Q8IVY1 113 aa14.4□□□□□ -0.1
SDCBP-202ENST00000413219 C18orf32Q8TCD1 76 aa14.4□□□□□ -0.1
SDCBP-202ENST00000413219 SERTAD4Q9NUC0 356 aa14.4□□□□□ -0.1
SDCBP-202ENST00000413219 FAM186AA6NE01 2351 aa14.4□□□□□ -0.1
SDCBP-202ENST00000413219 C20orf202A1L168 122 aa14.39□□□□□ -0.11
SDCBP-202ENST00000413219 LHBP01229 141 aa14.39□□□□□ -0.11
SDCBP-202ENST00000413219 MYOD1P15172 320 aa14.39□□□□□ -0.11
SDCBP-202ENST00000413219 TMEM30BQ3MIR4 351 aa14.39□□□□□ -0.11
SDCBP-202ENST00000413219 UTF1Q5T230 341 aa14.39□□□□□ -0.11
SDCBP-202ENST00000413219 LEAP2Q969E1 77 aa14.39□□□□□ -0.11
SDCBP-202ENST00000413219 MBD6Q96DN6 1003 aa14.39□□□□□ -0.11
SDCBP-202ENST00000413219 MRPS16Q9Y3D3 137 aaKnown RBP14.39□□□□□ -0.11
SDCBP-202ENST00000413219 MED13Q9UHV7 2174 aa14.39□□□□□ -0.11
SDCBP-202ENST00000413219 KLF5Q13887 457 aaPredicted RBP14.38□□□□□ -0.11
SDCBP-202ENST00000413219 LYG1Q8N1E2 194 aa14.38□□□□□ -0.11
SDCBP-202ENST00000413219 STPG4Q8N801 248 aa14.38□□□□□ -0.11
SDCBP-202ENST00000413219 OR5B3Q8NH48 314 aa14.38□□□□□ -0.11
SDCBP-202ENST00000413219 ORAOV1Q8WV07 137 aa14.38□□□□□ -0.11
SDCBP-202ENST00000413219 FAM122AQ96E09 287 aa14.38□□□□□ -0.11
SDCBP-202ENST00000413219 DNAJC4Q9NNZ3 241 aa14.38□□□□□ -0.11
SDCBP-202ENST00000413219 RNASE2P10153 161 aaKnown RBP14.38□□□□□ -0.11
SDCBP-202ENST00000413219 CD69Q07108 199 aa14.38□□□□□ -0.11
SDCBP-202ENST00000413219 STUMQ69YW2 141 aa14.38□□□□□ -0.11
SDCBP-202ENST00000413219 MOB3BQ86TA1 216 aa14.38□□□□□ -0.11
SDCBP-202ENST00000413219 CACNG8Q8WXS5 425 aa14.38□□□□□ -0.11
SDCBP-202ENST00000413219 FAM167A-AS1Q96KT0 104 aa14.38□□□□□ -0.11
SDCBP-202ENST00000413219 ZNF714Q96N38 554 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms