RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 TCTE3Q8IZS6 198 aa14.67□□□□□ -0.06
CDC42-204ENST00000411827 OR10W1Q8NGF6 305 aa14.67□□□□□ -0.06
CDC42-204ENST00000411827 OR2T35Q8NGX2 323 aa14.67□□□□□ -0.06
CDC42-204ENST00000411827 MAGT1Q9H0U3 335 aa14.67□□□□□ -0.06
CDC42-204ENST00000411827 SLA2Q9H6Q3 261 aa14.67□□□□□ -0.06
CDC42-204ENST00000411827 KLK9Q9UKQ9 250 aa14.67□□□□□ -0.06
CDC42-204ENST00000411827 LSM5Q9Y4Y9 91 aaKnown RBP14.67□□□□□ -0.06
CDC42-204ENST00000411827 A0A1B0GVG6 124 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 CLPSL1A2RUU4 121 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 LINC01548A6NM66 108 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 SSSCA1O60232 199 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 FBXO24O75426 580 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 IFNA10P01566 189 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 IGHG4P01861 327 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 DEFA4P12838 97 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 MYOD1P15172 320 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 RAB11AP62491 216 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 CD83Q01151 205 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 ECSCRQ19T08 205 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 C2orf83Q53S99 150 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 Q6ZS46 218 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 CENPVQ7Z7K6 275 aaPredicted RBP14.66□□□□□ -0.06
CDC42-204ENST00000411827 SLC24A4Q8NFF2 622 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 FAM103A1Q9BTL3 118 aaKnown RBP14.66□□□□□ -0.06
CDC42-204ENST00000411827 WNT10AQ9GZT5 417 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 RCL1Q9Y2P8 373 aaKnown RBP14.66□□□□□ -0.06
CDC42-204ENST00000411827 STRAPQ9Y3F4 350 aaKnown RBP14.66□□□□□ -0.06
CDC42-204ENST00000411827 FBXO7Q9Y3I1 522 aa14.66□□□□□ -0.06
CDC42-204ENST00000411827 F11RQ9Y624 299 aaKnown RBP14.66□□□□□ -0.06
CDC42-204ENST00000411827 PSMB11A5LHX3 300 aa14.65□□□□□ -0.06
CDC42-204ENST00000411827 ELANEP08246 267 aa14.65□□□□□ -0.06
CDC42-204ENST00000411827 LYL1P12980 280 aa14.65□□□□□ -0.06
CDC42-204ENST00000411827 AREGP15514 252 aa14.65□□□□□ -0.06
CDC42-204ENST00000411827 PPIFP30405 207 aaKnown RBP14.65□□□□□ -0.06
CDC42-204ENST00000411827 P2RY1P47900 373 aa14.65□□□□□ -0.06
CDC42-204ENST00000411827 TEX38Q6PEX7 206 aa14.65□□□□□ -0.06
CDC42-204ENST00000411827 LINC01006Q8NI28 216 aa14.65□□□□□ -0.06
CDC42-204ENST00000411827 RNASEH2CQ8TDP1 164 aaKnown RBP14.65□□□□□ -0.06
CDC42-204ENST00000411827 PSENENQ9NZ42 101 aa14.65□□□□□ -0.06
CDC42-204ENST00000411827 PLXNB1O43157 2135 aa14.65□□□□□ -0.06
CDC42-204ENST00000411827 NXPH3O95157 252 aa14.64□□□□□ -0.07
CDC42-204ENST00000411827 SLC25A4P12235 298 aa14.64□□□□□ -0.07
CDC42-204ENST00000411827 NPY1RP25929 384 aa14.64□□□□□ -0.07
CDC42-204ENST00000411827 CFHR3Q02985 330 aa14.64□□□□□ -0.07
CDC42-204ENST00000411827 FOXE3Q13461 319 aa14.64□□□□□ -0.07
CDC42-204ENST00000411827 EXOSC2Q13868 293 aaKnown RBP14.64□□□□□ -0.07
CDC42-204ENST00000411827 LRRC37A5PQ49AS3 106 aa14.64□□□□□ -0.07
CDC42-204ENST00000411827 FAM209BQ5JX69 171 aa14.64□□□□□ -0.07
CDC42-204ENST00000411827 ASPHD1Q5U4P2 390 aa14.64□□□□□ -0.07
CDC42-204ENST00000411827 PVRIGQ6DKI7 326 aa14.64□□□□□ -0.07
CDC42-204ENST00000411827 C11orf87Q6NUJ2 197 aa14.64□□□□□ -0.07
CDC42-204ENST00000411827 SLC25A31Q9H0C2 315 aa14.64□□□□□ -0.07
CDC42-204ENST00000411827 G3V318 75 aa14.63□□□□□ -0.07
CDC42-204ENST00000411827 IGLV1-40P01703 118 aa14.63□□□□□ -0.07
CDC42-204ENST00000411827 RNASE2P10153 161 aaKnown RBP14.63□□□□□ -0.07
CDC42-204ENST00000411827 NUP62P37198 522 aaPredicted RBP14.63□□□□□ -0.07
CDC42-204ENST00000411827 SPINK9Q5DT21 86 aa14.63□□□□□ -0.07
CDC42-204ENST00000411827 TMEM65Q6PI78 240 aa14.63□□□□□ -0.07
CDC42-204ENST00000411827 NECAP1Q8NC96 275 aa14.63□□□□□ -0.07
CDC42-204ENST00000411827 OR5T1Q8NG75 326 aa14.63□□□□□ -0.07
CDC42-204ENST00000411827 WFDC12Q8WWY7 111 aa14.63□□□□□ -0.07
CDC42-204ENST00000411827 USMG5Q96IX5 58 aa14.63□□□□□ -0.07
CDC42-204ENST00000411827 ST6GAL2Q96JF0 529 aa14.63□□□□□ -0.07
CDC42-204ENST00000411827 NOL4LQ96MY1 436 aaPredicted RBP14.63□□□□□ -0.07
CDC42-204ENST00000411827 P2RX4Q99571 388 aa14.63□□□□□ -0.07
CDC42-204ENST00000411827 RANGRFQ9HD47 186 aaPredicted RBP14.63□□□□□ -0.07
CDC42-204ENST00000411827 LYRM2Q9NU23 88 aaPredicted RBP14.63□□□□□ -0.07
CDC42-204ENST00000411827 RNF114Q9Y508 228 aa14.63□□□□□ -0.07
CDC42-204ENST00000411827 FAM223BA6NKX1 122 aa14.62□□□□□ -0.07
CDC42-204ENST00000411827 IAPPP10997 89 aa14.62□□□□□ -0.07
CDC42-204ENST00000411827 PAX9P55771 341 aa14.62□□□□□ -0.07
CDC42-204ENST00000411827 SPANXN5Q5MJ07 72 aa14.62□□□□□ -0.07
CDC42-204ENST00000411827 ETFRF1Q6IPR1 90 aa14.62□□□□□ -0.07
CDC42-204ENST00000411827 STX12Q86Y82 276 aa14.62□□□□□ -0.07
CDC42-204ENST00000411827 FAM223AQ8IWN6 122 aa14.62□□□□□ -0.07
CDC42-204ENST00000411827 RNF152Q8N8N0 203 aa14.62□□□□□ -0.07
CDC42-204ENST00000411827 OR4X2Q8NGF9 303 aa14.62□□□□□ -0.07
CDC42-204ENST00000411827 RNF126Q9BV68 326 aa14.62□□□□□ -0.07
CDC42-204ENST00000411827 C11orf1Q9H5F2 150 aa14.62□□□□□ -0.07
CDC42-204ENST00000411827 TRBV9A0A0B4J1U6 114 aa14.61□□□□□ -0.07
CDC42-204ENST00000411827 A0A0G2JLM5 398 aa14.61□□□□□ -0.07
CDC42-204ENST00000411827 RPS10-NUDT3A0A1W2PQS6 291 aa14.61□□□□□ -0.07
CDC42-204ENST00000411827 OR8U8P0C7N1 319 aa14.61□□□□□ -0.07
CDC42-204ENST00000411827 CAV2P51636 162 aa14.61□□□□□ -0.07
CDC42-204ENST00000411827 BAXQ07812 192 aa14.61□□□□□ -0.07
CDC42-204ENST00000411827 TMEM14EPQ6UXP3 125 aa14.61□□□□□ -0.07
CDC42-204ENST00000411827 KLHDC1Q8N7A1 406 aa14.61□□□□□ -0.07
CDC42-204ENST00000411827 CACNG8Q8WXS5 425 aa14.61□□□□□ -0.07
CDC42-204ENST00000411827 TMEM158Q8WZ71 300 aa14.61□□□□□ -0.07
CDC42-204ENST00000411827 WDR89Q96FK6 387 aaPredicted RBP14.61□□□□□ -0.07
CDC42-204ENST00000411827 CXorf58Q96LI9 332 aa14.61□□□□□ -0.07
CDC42-204ENST00000411827 ATP6V0BQ99437 205 aa14.61□□□□□ -0.07
CDC42-204ENST00000411827 ZNF355PQ9NSJ1 428 aa14.61□□□□□ -0.07
CDC42-204ENST00000411827 MBD2Q9UBB5 411 aa14.61□□□□□ -0.07
CDC42-204ENST00000411827 TET2Q6N021 2002 aaPredicted RBP14.6□□□□□ -0.07
CDC42-204ENST00000411827 CUBNO60494 3623 aa14.6□□□□□ -0.07
CDC42-204ENST00000411827 IGLV11-55A0A075B6I3 123 aa14.6□□□□□ -0.07
CDC42-204ENST00000411827 H0YIZ8 118 aa14.6□□□□□ -0.07
CDC42-204ENST00000411827 TMEM50AO95807 157 aa14.6□□□□□ -0.07
CDC42-204ENST00000411827 IFNA4P05014 189 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms