RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 MFAP2P55001 183 aa12.28□□□□□ -0.44
MRPL55-220ENST00000411464 RELQ04864 619 aaPredicted RBP12.28□□□□□ -0.44
MRPL55-220ENST00000411464 ZNF124Q15973 351 aa12.28□□□□□ -0.44
MRPL55-220ENST00000411464 TMEM116Q8NCL8 245 aa12.28□□□□□ -0.44
MRPL55-220ENST00000411464 OR5AP2Q8NGF4 316 aa12.28□□□□□ -0.44
MRPL55-220ENST00000411464 C2CD4CQ8TF44 421 aa12.28□□□□□ -0.44
MRPL55-220ENST00000411464 CMTM3Q96MX0 182 aa12.28□□□□□ -0.44
MRPL55-220ENST00000411464 C11orf68Q9H3H3 251 aaKnown RBP12.28□□□□□ -0.44
MRPL55-220ENST00000411464 OR51B2Q9Y5P1 312 aa12.28□□□□□ -0.44
MRPL55-220ENST00000411464 ETV7Q9Y603 341 aa12.28□□□□□ -0.44
MRPL55-220ENST00000411464 IGKV3-7A0A075B6H7 116 aa12.27□□□□□ -0.45
MRPL55-220ENST00000411464 IGHV7-4-1A0A0J9YVY3 117 aa12.27□□□□□ -0.45
MRPL55-220ENST00000411464 F8W735 103 aaPredicted RBP12.27□□□□□ -0.45
MRPL55-220ENST00000411464 K7EIM0 57 aa12.27□□□□□ -0.45
MRPL55-220ENST00000411464 CHEK1O14757 476 aa12.27□□□□□ -0.45
MRPL55-220ENST00000411464 NUPL2O15504 423 aaKnown RBP12.27□□□□□ -0.45
MRPL55-220ENST00000411464 CTSGP08311 255 aa12.27□□□□□ -0.45
MRPL55-220ENST00000411464 PSMB9P28065 219 aa12.27□□□□□ -0.45
MRPL55-220ENST00000411464 TCTAP57738 103 aa12.27□□□□□ -0.45
MRPL55-220ENST00000411464 HERV-K104P61576 105 aa12.27□□□□□ -0.45
MRPL55-220ENST00000411464 TMEM56Q96MV1 263 aa12.27□□□□□ -0.45
MRPL55-220ENST00000411464 SSR3Q9UNL2 185 aa12.27□□□□□ -0.45
MRPL55-220ENST00000411464 TRAV14DV4A0A0A6YYC5 116 aa12.26□□□□□ -0.45
MRPL55-220ENST00000411464 A0A0A6YYH2 397 aa12.26□□□□□ -0.45
MRPL55-220ENST00000411464 A6NJ64 397 aa12.26□□□□□ -0.45
MRPL55-220ENST00000411464 KRASP01116 189 aa12.26□□□□□ -0.45
MRPL55-220ENST00000411464 F2RP25116 425 aa12.26□□□□□ -0.45
MRPL55-220ENST00000411464 GNRHRP30968 328 aa12.26□□□□□ -0.45
MRPL55-220ENST00000411464 CBX5P45973 191 aa12.26□□□□□ -0.45
MRPL55-220ENST00000411464 SCAND1P57086 179 aa12.26□□□□□ -0.45
MRPL55-220ENST00000411464 PAFAH1B2P68402 229 aa12.26□□□□□ -0.45
MRPL55-220ENST00000411464 GBGT1Q8N5D6 347 aa12.26□□□□□ -0.45
MRPL55-220ENST00000411464 MRPS26Q9BYN8 205 aaKnown RBP12.26□□□□□ -0.45
MRPL55-220ENST00000411464 AUNIPQ9H7T9 357 aa12.26□□□□□ -0.45
MRPL55-220ENST00000411464 DIABLOQ9NR28 239 aa12.26□□□□□ -0.45
MRPL55-220ENST00000411464 FKBP11Q9NYL4 201 aa12.26□□□□□ -0.45
MRPL55-220ENST00000411464 NSG2Q9Y328 171 aa12.26□□□□□ -0.45
MRPL55-220ENST00000411464 KMT2AQ03164 3969 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 IGHV3-49A0A0A0MS15 119 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 PGLYRP1O75594 196 aaPredicted RBP12.25□□□□□ -0.45
MRPL55-220ENST00000411464 RLN1P04808 185 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 SDC2P34741 201 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 LPAR6P43657 344 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 PRR20EP86478 221 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 PRR20CP86479 221 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 PRR20DP86480 221 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 PRR20BP86481 221 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 PRR20AP86496 221 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 MXD1Q05195 221 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 OR5H6Q8NGV6 325 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 SLC25A38Q96DW6 304 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 OR10C1Q96KK4 312 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 VCX3AQ9NNX9 186 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 PRNDQ9UKY0 176 aa12.25□□□□□ -0.45
MRPL55-220ENST00000411464 DEFB4AO15263 64 aa12.24□□□□□ -0.45
MRPL55-220ENST00000411464 CA1P00915 261 aaPredicted RBP12.24□□□□□ -0.45
MRPL55-220ENST00000411464 G6PCP35575 357 aa12.24□□□□□ -0.45
MRPL55-220ENST00000411464 MFAP4P55083 255 aa12.24□□□□□ -0.45
MRPL55-220ENST00000411464 TMEM187Q14656 261 aa12.24□□□□□ -0.45
MRPL55-220ENST00000411464 IDNKQ5T6J7 187 aa12.24□□□□□ -0.45
MRPL55-220ENST00000411464 CMTM1Q8IZ96 169 aa12.24□□□□□ -0.45
MRPL55-220ENST00000411464 CADM3Q8N126 398 aa12.24□□□□□ -0.45
MRPL55-220ENST00000411464 OR1P1Q8NH06 330 aa12.24□□□□□ -0.45
MRPL55-220ENST00000411464 FCAMRQ8WWV6 532 aa12.24□□□□□ -0.45
MRPL55-220ENST00000411464 SLC25A46Q96AG3 418 aa12.24□□□□□ -0.45
MRPL55-220ENST00000411464 DGCR14Q96DF8 476 aaKnown RBP12.24□□□□□ -0.45
MRPL55-220ENST00000411464 IFT46Q9NQC8 304 aa12.24□□□□□ -0.45
MRPL55-220ENST00000411464 EHFQ9NZC4 300 aa12.24□□□□□ -0.45
MRPL55-220ENST00000411464 IGHV3OR16-13A0A075B7E8 117 aa12.23□□□□□ -0.45
MRPL55-220ENST00000411464 IGHV3-74A0A0B4J1X5 117 aa12.23□□□□□ -0.45
MRPL55-220ENST00000411464 IGLL5B9A064 214 aa12.23□□□□□ -0.45
MRPL55-220ENST00000411464 CD5P06127 495 aa12.23□□□□□ -0.45
MRPL55-220ENST00000411464 EIF4EP06730 217 aaKnown RBP12.23□□□□□ -0.45
MRPL55-220ENST00000411464 DHRS11Q6UWP2 260 aa12.23□□□□□ -0.45
MRPL55-220ENST00000411464 MISP3Q96FF7 219 aa12.23□□□□□ -0.45
MRPL55-220ENST00000411464 TSC22D3Q99576 134 aa12.23□□□□□ -0.45
MRPL55-220ENST00000411464 TXN2Q99757 166 aa12.23□□□□□ -0.45
MRPL55-220ENST00000411464 MEIS3P1A6NDR6 274 aa12.22□□□□□ -0.45
MRPL55-220ENST00000411464 DNASE2O00115 360 aaPredicted RBP12.22□□□□□ -0.45
MRPL55-220ENST00000411464 CLEC2LP0C7M8 214 aa12.22□□□□□ -0.45
MRPL55-220ENST00000411464 FAM90A2PQ658T7 463 aa12.22□□□□□ -0.45
MRPL55-220ENST00000411464 TCF24Q7RTU0 167 aa12.22□□□□□ -0.45
MRPL55-220ENST00000411464 MOB3AQ96BX8 217 aa12.22□□□□□ -0.45
MRPL55-220ENST00000411464 ZNF2Q9BSG1 426 aaPredicted RBP12.22□□□□□ -0.45
MRPL55-220ENST00000411464 NXF2Q9GZY0 626 aaKnown RBP12.22□□□□□ -0.45
MRPL55-220ENST00000411464 C11orf94C9JXX5 98 aa12.21□□□□□ -0.45
MRPL55-220ENST00000411464 I3L2K1 104 aa12.21□□□□□ -0.45
MRPL55-220ENST00000411464 RFX2P48378 723 aa12.21□□□□□ -0.45
MRPL55-220ENST00000411464 RPL11P62913 178 aaKnown RBP12.21□□□□□ -0.45
MRPL55-220ENST00000411464 GINS3Q9BRX5 216 aa12.21□□□□□ -0.45
MRPL55-220ENST00000411464 TMEM14BQ9NUH8 114 aa12.21□□□□□ -0.45
MRPL55-220ENST00000411464 PCLOQ9Y6V0 5065 aa12.2□□□□□ -0.46
MRPL55-220ENST00000411464 C15orf61A6NNL5 157 aa12.2□□□□□ -0.46
MRPL55-220ENST00000411464 GNG7O60262 68 aa12.2□□□□□ -0.46
MRPL55-220ENST00000411464 DFFBO76075 338 aa12.2□□□□□ -0.46
MRPL55-220ENST00000411464 IGHV3-48P01763 117 aa12.2□□□□□ -0.46
MRPL55-220ENST00000411464 DEFB131AP59861 70 aa12.2□□□□□ -0.46
MRPL55-220ENST00000411464 LEMD1Q68G75 181 aa12.2□□□□□ -0.46
MRPL55-220ENST00000411464 PINX1Q96BK5 328 aaKnown RBP12.2□□□□□ -0.46
MRPL55-220ENST00000411464 ZNF414Q96IQ9 312 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms