RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 TM4SF20Q53R12 229 aa14.37□□□□□ -0.11
SF3A1-202ENST00000411423 SPINK9Q5DT21 86 aa14.37□□□□□ -0.11
SF3A1-202ENST00000411423 HSD17B13Q7Z5P4 300 aaPredicted RBP14.37□□□□□ -0.11
SF3A1-202ENST00000411423 OR4C16Q8NGL9 310 aa14.37□□□□□ -0.11
SF3A1-202ENST00000411423 VN1R17PQ8TDU5 208 aa14.37□□□□□ -0.11
SF3A1-202ENST00000411423 SCARB1Q8WTV0 552 aa14.37□□□□□ -0.11
SF3A1-202ENST00000411423 TSC22D3Q99576 134 aa14.37□□□□□ -0.11
SF3A1-202ENST00000411423 RTBDNQ9BSG5 229 aaPredicted RBP14.37□□□□□ -0.11
SF3A1-202ENST00000411423 MLXQ9UH92 298 aa14.37□□□□□ -0.11
SF3A1-202ENST00000411423 RYR3Q15413 4870 aa14.37□□□□□ -0.11
SF3A1-202ENST00000411423 ZNF320A2RRD8 509 aa14.36□□□□□ -0.11
SF3A1-202ENST00000411423 OR2T8A6NH00 312 aa14.36□□□□□ -0.11
SF3A1-202ENST00000411423 CD7P09564 240 aa14.36□□□□□ -0.11
SF3A1-202ENST00000411423 TNFSF8P32971 234 aa14.36□□□□□ -0.11
SF3A1-202ENST00000411423 SSBP1Q04837 148 aaKnown RBP14.36□□□□□ -0.11
SF3A1-202ENST00000411423 OR2C3Q8N628 320 aa14.36□□□□□ -0.11
SF3A1-202ENST00000411423 OR2K2Q8NGT1 345 aa14.36□□□□□ -0.11
SF3A1-202ENST00000411423 WDR89Q96FK6 387 aaPredicted RBP14.36□□□□□ -0.11
SF3A1-202ENST00000411423 CHRDL1Q9BU40 450 aa14.36□□□□□ -0.11
SF3A1-202ENST00000411423 ZNF436Q9C0F3 470 aaPredicted RBP14.36□□□□□ -0.11
SF3A1-202ENST00000411423 WFDC10AQ9H1F0 79 aa14.36□□□□□ -0.11
SF3A1-202ENST00000411423 FKBP11Q9NYL4 201 aa14.36□□□□□ -0.11
SF3A1-202ENST00000411423 A0A0B4J293 547 aa14.35□□□□□ -0.11
SF3A1-202ENST00000411423 TGOLN2O43493 480 aa14.35□□□□□ -0.11
SF3A1-202ENST00000411423 CTSDP07339 412 aaPredicted RBP14.35□□□□□ -0.11
SF3A1-202ENST00000411423 PRCDQ00LT1 54 aa14.35□□□□□ -0.11
SF3A1-202ENST00000411423 SGPP2Q8IWX5 399 aa14.35□□□□□ -0.11
SF3A1-202ENST00000411423 OR4A16Q8NH70 328 aa14.35□□□□□ -0.11
SF3A1-202ENST00000411423 LHFPL5Q8TAF8 219 aa14.35□□□□□ -0.11
SF3A1-202ENST00000411423 DYNLRB2Q8TF09 96 aa14.35□□□□□ -0.11
SF3A1-202ENST00000411423 TMEM56Q96MV1 263 aa14.35□□□□□ -0.11
SF3A1-202ENST00000411423 RCHY1Q96PM5 261 aa14.35□□□□□ -0.11
SF3A1-202ENST00000411423 C5orf66Q9H5L9 145 aa14.35□□□□□ -0.11
SF3A1-202ENST00000411423 THYN1Q9P016 225 aa14.35□□□□□ -0.11
SF3A1-202ENST00000411423 TENM3Q9P273 2699 aa14.35□□□□□ -0.11
SF3A1-202ENST00000411423 ANKRD20A5PA0PJZ0 165 aa14.34□□□□□ -0.11
SF3A1-202ENST00000411423 GSTZ1O43708 216 aaPredicted RBP14.34□□□□□ -0.11
SF3A1-202ENST00000411423 UCP1P25874 307 aa14.34□□□□□ -0.11
SF3A1-202ENST00000411423 ADMP35318 185 aa14.34□□□□□ -0.11
SF3A1-202ENST00000411423 HSPE1P61604 102 aaKnown RBP14.34□□□□□ -0.11
SF3A1-202ENST00000411423 FAM106AQ4KMX7 169 aa14.34□□□□□ -0.11
SF3A1-202ENST00000411423 PLET1Q6UQ28 207 aa14.34□□□□□ -0.11
SF3A1-202ENST00000411423 UXS1Q8NBZ7 420 aa14.34□□□□□ -0.11
SF3A1-202ENST00000411423 ZFAND1Q8TCF1 268 aa14.34□□□□□ -0.11
SF3A1-202ENST00000411423 TM2D3Q9BRN9 247 aa14.34□□□□□ -0.11
SF3A1-202ENST00000411423 RBM38Q9H0Z9 239 aaKnown RBP14.34□□□□□ -0.11
SF3A1-202ENST00000411423 C21orf62Q9NYP8 219 aa14.34□□□□□ -0.11
SF3A1-202ENST00000411423 COPZ2Q9P299 210 aa14.34□□□□□ -0.11
SF3A1-202ENST00000411423 I3L2K1 104 aa14.33□□□□□ -0.12
SF3A1-202ENST00000411423 AKAIN1P0CW23 69 aa14.33□□□□□ -0.12
SF3A1-202ENST00000411423 C8orf88P0DMB2 117 aa14.33□□□□□ -0.12
SF3A1-202ENST00000411423 MEF2DQ14814 521 aa14.33□□□□□ -0.12
SF3A1-202ENST00000411423 Q6ZRM9 215 aa14.33□□□□□ -0.12
SF3A1-202ENST00000411423 TMEM61Q8N0U2 210 aa14.33□□□□□ -0.12
SF3A1-202ENST00000411423 OR1P1Q8NH06 330 aa14.33□□□□□ -0.12
SF3A1-202ENST00000411423 MCFD2Q8NI22 146 aa14.33□□□□□ -0.12
SF3A1-202ENST00000411423 PLEKHA3Q9HB20 300 aa14.33□□□□□ -0.12
SF3A1-202ENST00000411423 GPR132Q9UNW8 380 aa14.33□□□□□ -0.12
SF3A1-202ENST00000411423 IGHV3OR16-8A0A075B7F1 116 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 ST8SIA3O43173 380 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 NOL3O60936 208 aaKnown RBP14.32□□□□□ -0.12
SF3A1-202ENST00000411423 IGHV3-48P01763 117 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 OR5AC1P0C628 307 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 CD81P60033 236 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 TRIM16LQ309B1 348 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 BTNL8Q6UX41 500 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 GTSCR1Q86UQ5 136 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 CCDC71LQ8N9Z2 235 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 ZNF114Q8NC26 417 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 OR51S1Q8NGJ8 323 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 GLYATL2Q8WU03 294 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 TMEM190Q8WZ59 177 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 NEURL2Q9BR09 285 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 TECRQ9NZ01 308 aaKnown RBP14.32□□□□□ -0.12
SF3A1-202ENST00000411423 STAB2Q8WWQ8 2551 aa14.32□□□□□ -0.12
SF3A1-202ENST00000411423 DISC1C4P0D8 188 aa14.31□□□□□ -0.12
SF3A1-202ENST00000411423 AKR1C2P52895 323 aa14.31□□□□□ -0.12
SF3A1-202ENST00000411423 GUCA2BQ16661 112 aa14.31□□□□□ -0.12
SF3A1-202ENST00000411423 LINC00322Q6ZN03 302 aaPredicted RBP14.31□□□□□ -0.12
SF3A1-202ENST00000411423 DEFB125Q8N687 156 aa14.31□□□□□ -0.12
SF3A1-202ENST00000411423 UBAC2Q8NBM4 344 aa14.31□□□□□ -0.12
SF3A1-202ENST00000411423 TMEM230Q96A57 120 aa14.31□□□□□ -0.12
SF3A1-202ENST00000411423 MISP3Q96FF7 219 aa14.31□□□□□ -0.12
SF3A1-202ENST00000411423 BSCL2Q96G97 398 aaPredicted RBP14.31□□□□□ -0.12
SF3A1-202ENST00000411423 NAA60Q9H7X0 242 aa14.31□□□□□ -0.12
SF3A1-202ENST00000411423 FABP12A6NFH5 140 aa14.3□□□□□ -0.12
SF3A1-202ENST00000411423 CYB5BO43169 146 aa14.3□□□□□ -0.12
SF3A1-202ENST00000411423 CTSGP08311 255 aa14.3□□□□□ -0.12
SF3A1-202ENST00000411423 HAGHQ16775 308 aa14.3□□□□□ -0.12
SF3A1-202ENST00000411423 ZNF57Q68EA5 555 aaPredicted RBP14.3□□□□□ -0.12
SF3A1-202ENST00000411423 TMEM222Q9H0R3 208 aa14.3□□□□□ -0.12
SF3A1-202ENST00000411423 PRR13Q9NZ81 148 aa14.3□□□□□ -0.12
SF3A1-202ENST00000411423 RABL2AQ9UBK7 228 aaPredicted RBP14.3□□□□□ -0.12
SF3A1-202ENST00000411423 RSL24D1Q9UHA3 163 aaKnown RBP14.3□□□□□ -0.12
SF3A1-202ENST00000411423 RABL2BQ9UNT1 228 aa14.3□□□□□ -0.12
SF3A1-202ENST00000411423 V9GYH0 126 aa14.3□□□□□ -0.12
SF3A1-202ENST00000411423 TEX13DA0A0J9YY54 714 aaPredicted RBP14.29□□□□□ -0.12
SF3A1-202ENST00000411423 RBMY1BA6NDE4 496 aaKnown RBP14.29□□□□□ -0.12
SF3A1-202ENST00000411423 RBMY1EA6NEQ0 496 aaKnown RBP14.29□□□□□ -0.12
SF3A1-202ENST00000411423 CRYM-AS1A6NIL9 109 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms