RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 DFFBO76075 338 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 SEC11BP0C7V7 166 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 FAM157CP0CG43 387 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 SPP1P10451 314 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 VWC2Q2TAL6 325 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 PRSS57Q6UWY2 283 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 TEX45Q8NA69 505 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 ZNF48Q96MX3 618 aaPredicted RBP4.44□□□□□ -1.7
EPHA4-202ENST00000409854 STRAPQ9Y3F4 350 aaKnown RBP4.44□□□□□ -1.7
EPHA4-202ENST00000409854 OR51B2Q9Y5P1 312 aa4.44□□□□□ -1.7
EPHA4-202ENST00000409854 TEX50A0A1B0GTY4 177 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 TMEM218A2RU14 115 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 PRSS46E5RG02 174 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 RBMXL2O75526 392 aaKnown RBP4.43□□□□□ -1.7
EPHA4-202ENST00000409854 VENTXO95231 258 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 RPS16P62249 146 aaKnown RBP4.43□□□□□ -1.7
EPHA4-202ENST00000409854 HBG1P69891 147 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 HBG2P69892 147 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 CLEC12BQ2HXU8 276 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 BSXQ3C1V8 233 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 VMA21Q3ZAQ7 101 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 SPANXN5Q5MJ07 72 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 EIF5AL1Q6IS14 154 aaKnown RBP4.43□□□□□ -1.7
EPHA4-202ENST00000409854 LHFPL4Q7Z7J7 247 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 RITA1Q96K30 269 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 PLA2G2EQ9NZK7 142 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 TENM4Q6N022 2769 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 FAM208BQ5VWN6 2430 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 TIMM23O14925 209 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 OR8U8P0C7N1 319 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 SULT1A2P50226 295 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 RPL8P62917 257 aaKnown RBP4.43□□□□□ -1.7
EPHA4-202ENST00000409854 EBI3Q14213 229 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 CLINT1Q14677 625 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 PSG5Q15238 335 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 ATP6V1FQ16864 119 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 DEFB113Q30KQ7 82 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 AKIRIN2Q53H80 203 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 SPINK9Q5DT21 86 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 C9orf152Q5JTZ5 239 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 FAM74A1Q5RGS3 127 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 CCDC144NLQ6NUI1 221 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 MOB3BQ86TA1 216 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 DYNAPQ8N1N2 210 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 C15orf54Q8N8G6 183 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 OR5R1Q8NH85 324 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 TMEM170AQ8WVE7 144 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 TMED6Q8WW62 240 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 TSNAXQ99598 290 aaKnown RBP4.43□□□□□ -1.7
EPHA4-202ENST00000409854 NDUFAF3Q9BU61 184 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 NDUFA4L2Q9NRX3 87 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 FBXO7Q9Y3I1 522 aa4.43□□□□□ -1.7
EPHA4-202ENST00000409854 IGHV3-72A0A0B4J1Y9 119 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 CGB1A6NKQ9 187 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 NDUFA3O95167 84 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 MYOD1P15172 320 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 MDKP21741 143 aaPredicted RBP4.42□□□□□ -1.7
EPHA4-202ENST00000409854 MAS1LP35410 378 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 Q8N6K4 173 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 TMEM217Q8N7C4 229 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 HSD17B11Q8NBQ5 300 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 RNF141Q8WVD5 230 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 HIPK2Q9H2X6 1198 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 ZNF430Q9H8G1 570 aaPredicted RBP4.42□□□□□ -1.7
EPHA4-202ENST00000409854 LPAR2Q9HBW0 351 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 CRYBG3Q68DQ2 2970 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 ELOA3CA0A087WX78 387 aaPredicted RBP4.42□□□□□ -1.7
EPHA4-202ENST00000409854 MSMBP08118 114 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 TAGLN2P37802 199 aaKnown RBP4.42□□□□□ -1.7
EPHA4-202ENST00000409854 ATP5IP56385 69 aaPredicted RBP4.42□□□□□ -1.7
EPHA4-202ENST00000409854 SLC38A11Q08AI6 406 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 PDZD9Q8IXQ8 264 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 NPBQ8NG41 125 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 PINX1Q96BK5 328 aaKnown RBP4.42□□□□□ -1.7
EPHA4-202ENST00000409854 MALSU1Q96EH3 234 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 MISP3Q96FF7 219 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 CXorf58Q96LI9 332 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 CLCC1Q96S66 551 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 TPSG1Q9NRR2 321 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 SIGLEC9Q9Y336 463 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 CHD6Q8TD26 2715 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 CENPVL3A0A0U1RRI6 287 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 A0A1B0GW64 132 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 CNTFRP26992 372 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 ATP6V0CP27449 155 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 RPS20P60866 119 aaKnown RBP4.42□□□□□ -1.7
EPHA4-202ENST00000409854 LOXL1Q08397 574 aaPredicted RBP4.42□□□□□ -1.7
EPHA4-202ENST00000409854 PRSS8Q16651 343 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 LRRC75BQ2VPJ9 315 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 CENPVQ7Z7K6 275 aaPredicted RBP4.42□□□□□ -1.7
EPHA4-202ENST00000409854 KRTAP1-3Q8IUG1 177 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 MMD2Q8IY49 270 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 OR1L8Q8NGR8 309 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 GNPNAT1Q96EK6 184 aaPredicted RBP4.42□□□□□ -1.7
EPHA4-202ENST00000409854 SAT2Q96F10 170 aaPredicted RBP4.42□□□□□ -1.7
EPHA4-202ENST00000409854 SH3BGRL3Q9H299 93 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 PLEKHA3Q9HB20 300 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 HEYLQ9NQ87 328 aaPredicted RBP4.42□□□□□ -1.7
EPHA4-202ENST00000409854 NAGKQ9UJ70 344 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 HILPDAQ9Y5L2 63 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms