RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 TRIM16LQ309B1 348 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 MORN2Q502X0 79 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 PRAMEF5Q5TYX0 476 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 HCP5Q6MZN7 132 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 HEPN1Q6WQI6 88 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 IDO2Q6ZQW0 420 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 LINC00311Q8N616 119 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 KIR3DL3Q8N743 410 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 Q8N7P7 452 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 ZDHHC22Q8N966 263 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 C8orf31Q8N9H6 132 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 OR10J5Q8NHC4 309 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 RFESDQ8TAC1 157 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 UBALD1Q8TB05 177 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 ENKURQ8TC29 256 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 H1FXQ92522 213 aaKnown RBP3.16□□□□□ -1.9
CLK1-203ENST00000409769 TNFRSF14Q92956 283 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 TMEM230Q96A57 120 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 CREB3L1Q96BA8 519 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 GALMQ96C23 342 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 RAB39BQ96DA2 213 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 C5orf30Q96GV9 206 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 YPEL2Q96QA6 119 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 GINS4Q9BRT9 223 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 AGMATQ9BSE5 352 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 RTBDNQ9BSG5 229 aaPredicted RBP3.16□□□□□ -1.9
CLK1-203ENST00000409769 SIRPDQ9H106 197 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 ALX4Q9H161 411 aaPredicted RBP3.16□□□□□ -1.9
CLK1-203ENST00000409769 C20orf85Q9H1P6 137 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 IFI27L2Q9H2X8 130 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 GAL3ST2Q9H3Q3 398 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 OR2S2Q9NQN1 319 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 MMP26Q9NRE1 261 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 NUDT15Q9NV35 164 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 MCUBQ9NWR8 336 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 RDH8Q9NYR8 311 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 TECRQ9NZ01 308 aaKnown RBP3.16□□□□□ -1.9
CLK1-203ENST00000409769 IDI2-AS1Q9NZ38 188 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 SCP2D1Q9UJQ7 156 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 FLVCR2Q9UPI3 526 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 INSIG2Q9Y5U4 225 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 NUBP2Q9Y5Y2 271 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 TNCP24821 2201 aa3.16□□□□□ -1.9
CLK1-203ENST00000409769 AKAP9Q99996 3911 aa3.15□□□□□ -1.9
CLK1-203ENST00000409769 SVEP1Q4LDE5 3571 aa3.15□□□□□ -1.9
CLK1-203ENST00000409769 BAHCC1Q9P281 2608 aa3.15□□□□□ -1.9
CLK1-203ENST00000409769 ITPR3Q14573 2671 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 TRAV6A0A075B6T7 132 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 C7orf66A4D0T2 115 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 INMT-MINDY4F8WBC2 141 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 ARPC1BO15143 372 aaKnown RBP3.15□□□□□ -1.91
CLK1-203ENST00000409769 BET1O15155 118 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 SLC31A2O15432 143 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 ENSAO43768 121 aaKnown RBP3.15□□□□□ -1.91
CLK1-203ENST00000409769 IGLV1-47P01700 117 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 IFNA6P05013 189 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 IL5P05113 134 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 CTSDP07339 412 aaPredicted RBP3.15□□□□□ -1.91
CLK1-203ENST00000409769 OR9G9P0C7N8 305 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 PRTN3P24158 256 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 GNRHRP30968 328 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 PPP1CCP36873 323 aaKnown RBP3.15□□□□□ -1.91
CLK1-203ENST00000409769 CEACAM6P40199 344 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 ZNF137PP52743 207 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 UBE2MP61081 183 aaKnown RBP3.15□□□□□ -1.91
CLK1-203ENST00000409769 RND3P61587 244 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 TSPAN5P62079 268 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 ANKRD55Q3KP44 614 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 SCGB2B2Q4G0G5 96 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 CT45A1Q5HYN5 189 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 FAHD2BQ6P2I3 314 aaPredicted RBP3.15□□□□□ -1.91
CLK1-203ENST00000409769 PLET1Q6UQ28 207 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 ZNF600Q6ZNG1 722 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 ZNF818PQ6ZRF7 136 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 SLC25A48Q6ZT89 311 aaKnown RBP3.15□□□□□ -1.91
CLK1-203ENST00000409769 KRTAP5-5Q701N2 237 aaPredicted RBP3.15□□□□□ -1.91
CLK1-203ENST00000409769 TMEM17Q86X19 198 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 SLC38A6Q8IZM9 456 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 WFDC11Q8NEX6 87 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 OR11H6Q8NGC7 330 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 CT45A3Q8NHU0 189 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 MARCH1Q8TCQ1 289 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 MRAPQ8TCY5 172 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 IL1F10Q8WWZ1 152 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 FAHD2AQ96GK7 314 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 AKR1E2Q96JD6 320 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 SCGB3A2Q96PL1 93 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 TBX15Q96SF7 602 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 ZNF251Q9BRH9 671 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 REG4Q9BYZ8 158 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 SLC2A9Q9NRM0 540 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 PSG11Q9UQ72 335 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 FOXA2Q9Y261 457 aaPredicted RBP3.15□□□□□ -1.91
CLK1-203ENST00000409769 KPTNQ9Y664 436 aa3.15□□□□□ -1.91
CLK1-203ENST00000409769 TET2Q6N021 2002 aaPredicted RBP3.15□□□□□ -1.91
CLK1-203ENST00000409769 ANK3Q12955 4377 aaKnown RBP3.15□□□□□ -1.91
CLK1-203ENST00000409769 ACANP16112 2415 aa3.14□□□□□ -1.91
CLK1-203ENST00000409769 PLXNB1O43157 2135 aa3.14□□□□□ -1.91
CLK1-203ENST00000409769 TACC2O95359 2948 aa3.14□□□□□ -1.91
CLK1-203ENST00000409769 ZFHX3Q15911 3703 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms