RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 MDFIC2A0A1B0GVS7 189 aa9.32□□□□□ -0.92
SNX13-202ENST00000409604 RRHO14718 337 aa9.32□□□□□ -0.92
SNX13-202ENST00000409604 IL4P05112 153 aa9.32□□□□□ -0.92
SNX13-202ENST00000409604 ERVK11-1P61568 191 aa9.32□□□□□ -0.92
SNX13-202ENST00000409604 RPL19P84098 196 aaKnown RBP9.32□□□□□ -0.92
SNX13-202ENST00000409604 C16orf82Q7Z2V1 217 aa9.32□□□□□ -0.92
SNX13-202ENST00000409604 COL4A2P08572 1712 aa9.31□□□□□ -0.92
SNX13-202ENST00000409604 HMSDA8MTL9 139 aa9.31□□□□□ -0.92
SNX13-202ENST00000409604 SRSF4Q08170 494 aaKnown RBP9.31□□□□□ -0.92
SNX13-202ENST00000409604 LY6G6FQ5SQ64 297 aa9.31□□□□□ -0.92
SNX13-202ENST00000409604 DYNLRB2Q8TF09 96 aa9.31□□□□□ -0.92
SNX13-202ENST00000409604 LSM10Q969L4 123 aaKnown RBP9.31□□□□□ -0.92
SNX13-202ENST00000409604 TRAF4Q9BUZ4 470 aaPredicted RBP9.31□□□□□ -0.92
SNX13-202ENST00000409604 TMPRSS5Q9H3S3 457 aa9.31□□□□□ -0.92
SNX13-202ENST00000409604 TCL1AP56279 114 aa9.31□□□□□ -0.92
SNX13-202ENST00000409604 OR5I1Q13606 314 aa9.31□□□□□ -0.92
SNX13-202ENST00000409604 C10orf113Q5VZT2 155 aa9.31□□□□□ -0.92
SNX13-202ENST00000409604 DHRS7BQ6IAN0 325 aaPredicted RBP9.31□□□□□ -0.92
SNX13-202ENST00000409604 ARPC1AQ92747 370 aa9.31□□□□□ -0.92
SNX13-202ENST00000409604 NPFFO15130 113 aa9.31□□□□□ -0.92
SNX13-202ENST00000409604 IGKV1-5P01602 117 aa9.31□□□□□ -0.92
SNX13-202ENST00000409604 IGFBP2P18065 325 aa9.31□□□□□ -0.92
SNX13-202ENST00000409604 OSR1Q8TAX0 266 aaPredicted RBP9.31□□□□□ -0.92
SNX13-202ENST00000409604 GAB2Q9UQC2 676 aa9.31□□□□□ -0.92
SNX13-202ENST00000409604 CT45A10P0DMU9 189 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 TIGITQ495A1 244 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 UTF1Q5T230 341 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 ZNF418Q8TF45 676 aaPredicted RBP9.3□□□□□ -0.92
SNX13-202ENST00000409604 GALNT14Q96FL9 552 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 REG4Q9BYZ8 158 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 FLNCQ14315 2725 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 IGLV3-1P01715 115 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 MBP02144 154 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 FAM157CP0CG43 387 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 NHLRC3Q5JS37 347 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 NHLRC2Q8NBF2 726 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 NBEAQ8NFP9 2946 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 BUB1B-PAK6H3BSN5 160 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 GCSAMLQ5JQS6 135 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 SLC16A13Q7RTY0 426 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 ZFP82Q8N141 532 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 IFI27L2Q9H2X8 130 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 AAMDCQ9H7C9 122 aa9.3□□□□□ -0.92
SNX13-202ENST00000409604 SETXQ7Z333 2677 aaKnown RBP9.29□□□□□ -0.92
SNX13-202ENST00000409604 RNASEK-C17orf49H0YIS7 233 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 AMY1AP04745 511 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 SLC35B1P78383 322 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 HABP2Q14520 560 aaPredicted RBP9.29□□□□□ -0.92
SNX13-202ENST00000409604 NSUN5P1Q3KNT7 163 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 ASCL4Q6XD76 172 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 LHFPL1Q86WI0 220 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 OR5AU1Q8NGC0 362 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 WFDC12Q8WWY7 111 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 TAF15Q92804 592 aaKnown RBP eCLIP9.29□□□□□ -0.92
SNX13-202ENST00000409604 TPSG1Q9NRR2 321 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 A0A1W2PPQ1 181 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 AREGP15514 252 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 PDPNQ86YL7 162 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 KDF1Q8NAX2 398 aaPredicted RBP9.29□□□□□ -0.92
SNX13-202ENST00000409604 OR4B1Q8NGF8 309 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 OR5R1Q8NH85 324 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 LYRM2Q9NU23 88 aaPredicted RBP9.29□□□□□ -0.92
SNX13-202ENST00000409604 IGSF10Q6WRI0 2623 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 K7EQM0 130 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 FCN1O00602 326 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 SIAH2O43255 324 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 AGAP20933 346 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 C17orf58Q2M2W7 97 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 ZNF660Q6AZW8 331 aaPredicted RBP9.29□□□□□ -0.92
SNX13-202ENST00000409604 SVBPQ8N300 66 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 NOL4LQ96MY1 436 aaPredicted RBP9.29□□□□□ -0.92
SNX13-202ENST00000409604 G3V318 75 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 S100A9P06702 114 aaKnown RBP9.29□□□□□ -0.92
SNX13-202ENST00000409604 TMEM155Q4W5P6 130 aa9.29□□□□□ -0.92
SNX13-202ENST00000409604 TRAV14DV4A0A0A6YYC5 116 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 HYPMO75409 117 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 EFNB3Q15768 340 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 RPEL1Q2QD12 228 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 TPTE2P1Q5T6R2 138 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 BORCS7Q96B45 105 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 SERTM2A0A1B0GWG4 89 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 H0Y8G0 127 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 H7BYZ3 331 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 SFTA3P0C7M3 94 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 ERVFC1-1P60608 527 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 CX3CL1P78423 397 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 MALSU1Q96EH3 234 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 DMDP11532 3685 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 SNAPINO95295 136 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 S100A4P26447 101 aaKnown RBP9.28□□□□□ -0.92
SNX13-202ENST00000409604 GATA4P43694 442 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 ATP5G2Q06055 141 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 RAB24Q969Q5 203 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 RNF126Q9BV68 326 aa9.28□□□□□ -0.92
SNX13-202ENST00000409604 KRBOX1C9JBD0 128 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 C11orf94C9JXX5 98 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 UPK2O00526 184 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 PRTN3P24158 256 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 MFAP4P55083 255 aa9.27□□□□□ -0.93
SNX13-202ENST00000409604 KRTAP10-9P60411 292 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms