RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 PCED1AQ9H1Q7 454 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 CXXC4Q9H2H0 198 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 TLN2Q9Y4G6 2542 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 TNRC6AQ8NDV7 1962 aaKnown RBP6.89□□□□□ -1.31
SNX13-201ENST00000409076 SERTM2A0A1B0GWG4 89 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 SIAH2O43255 324 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 MT-CO2P00403 227 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 SLC25A5P05141 298 aaKnown RBP6.89□□□□□ -1.31
SNX13-201ENST00000409076 ARSJQ5FYB0 599 aaPredicted RBP6.89□□□□□ -1.31
SNX13-201ENST00000409076 TEPPQ6URK8 271 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 TMEM14EPQ6UXP3 125 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 TCF24Q7RTU0 167 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 SPSB4Q96A44 273 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 HARBI1Q96MB7 349 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 NABP2Q9BQ15 211 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 PSMG3Q9BT73 122 aaPredicted RBP6.89□□□□□ -1.31
SNX13-201ENST00000409076 TRBV24-1A0A075B6N3 115 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 APOA2P02652 100 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 SELENOVP59797 346 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 UBE2G1P62253 170 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 RHOBP62745 196 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 RPL8P62917 257 aaKnown RBP6.89□□□□□ -1.31
SNX13-201ENST00000409076 SSBP2P81877 361 aaPredicted RBP6.89□□□□□ -1.31
SNX13-201ENST00000409076 VAMP3Q15836 100 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 OR8G5Q8NG78 346 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 GGTLC1Q9BX51 225 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 C11orf1Q9H5F2 150 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 CALYQ9NYX4 217 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 GOLT1BQ9Y3E0 138 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 AKAP13Q12802 2813 aa6.89□□□□□ -1.31
SNX13-201ENST00000409076 CACNA1AO00555 2505 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 FAM208BQ5VWN6 2430 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 SAA2-SAA4A0A096LPE2 208 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 LOC389332A0A1B0GUA5 103 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 NTN3O00634 580 aaPredicted RBP6.88□□□□□ -1.31
SNX13-201ENST00000409076 SAA2P0DJI9 122 aaPredicted RBP6.88□□□□□ -1.31
SNX13-201ENST00000409076 UQCRFS1P47985 274 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 DIAPH2-AS1Q14236 149 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 OR4A47Q6IF82 309 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 UNQ5815/PRO19632Q6UWF5 114 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 Q6ZWC4 215 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 FAM214BQ7L5A3 538 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 MOB1BQ7L9L4 216 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 SSX8Q7RTT4 187 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 PPP1R35Q8TAP8 253 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 NPIPB3Q92617 1050 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 ANAPC16Q96DE5 110 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 MRPL37Q9BZE1 423 aaKnown RBP6.88□□□□□ -1.31
SNX13-201ENST00000409076 SAP30LQ9HAJ7 183 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 GNB4Q9HAV0 340 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 HSPB7Q9UBY9 170 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 CENPEQ02224 2701 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 M0R2Z0 102 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 CORTO00230 105 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 SLC25A17O43808 307 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 TNFAIP6P98066 277 aaPredicted RBP6.88□□□□□ -1.31
SNX13-201ENST00000409076 EFNB3Q15768 340 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 GBGT1Q8N5D6 347 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 FAM168AQ92567 244 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 P2RX4Q99571 388 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 RNF114Q9Y508 228 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 TET2Q6N021 2002 aaPredicted RBP6.88□□□□□ -1.31
SNX13-201ENST00000409076 IGHV3OR16-13A0A075B7E8 117 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 IGHV3-74A0A0B4J1X5 117 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 J3KRW8 73 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 LINC00869P0C866 280 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 DUTP33316 252 aaKnown RBP6.88□□□□□ -1.31
SNX13-201ENST00000409076 BRWD1-AS2P59051 145 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 NUTF2P61970 127 aaKnown RBP6.88□□□□□ -1.31
SNX13-201ENST00000409076 RPP30P78346 268 aaKnown RBP6.88□□□□□ -1.31
SNX13-201ENST00000409076 TRA2AQ13595 282 aaKnown RBP eCLIP6.88□□□□□ -1.31
SNX13-201ENST00000409076 IBA57Q5T440 356 aaKnown RBP6.88□□□□□ -1.31
SNX13-201ENST00000409076 ZNF841Q6ZN19 808 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 COLCA1Q6ZS62 124 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 PGLYRP4Q96LB8 373 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 YPEL4Q96NS1 127 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 SMDT1Q9H4I9 107 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 SH2D2AQ9NP31 389 aa6.88□□□□□ -1.31
SNX13-201ENST00000409076 TRGV10A0A0A0MS01 117 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 TRAV8-1A0A0A6YYK1 113 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 DNPH1O43598 174 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 CXorf1O96002 111 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 IGHV3-23P01764 117 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 RBP4P02753 201 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 RPLP1P05386 114 aaKnown RBP6.87□□□□□ -1.31
SNX13-201ENST00000409076 PTTG1IPP53801 180 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 TMEM183BQ1AE95 376 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 MORN5Q5VZ52 161 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 Q8IYB0 196 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 OR5R1Q8NH85 324 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 AGMATQ9BSE5 352 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 DYNLRB1Q9NP97 96 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 SONP18583 2426 aaKnown RBP6.87□□□□□ -1.31
SNX13-201ENST00000409076 K7EN84 100 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 LYZP61626 148 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 HES1Q14469 280 aa6.87□□□□□ -1.31
SNX13-201ENST00000409076 ACSF3Q4G176 576 aaPredicted RBP6.87□□□□□ -1.31
SNX13-201ENST00000409076 C1orf229Q6ZS94 237 aaPredicted RBP6.87□□□□□ -1.31
SNX13-201ENST00000409076 CISD2Q8N5K1 135 aaKnown RBP6.87□□□□□ -1.31
SNX13-201ENST00000409076 TMEM116Q8NCL8 245 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms