RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 LCN12Q6JVE5 192 aa14.86□□□□□ -0.03
SMPD4-202ENST00000409031 SP7Q8TDD2 431 aaPredicted RBP14.86□□□□□ -0.03
SMPD4-202ENST00000409031 SNRNP200O75643 2136 aaKnown RBP14.86□□□□□ -0.03
SMPD4-202ENST00000409031 FHL1Q13642 323 aa14.86□□□□□ -0.03
SMPD4-202ENST00000409031 TSKUQ8WUA8 353 aa14.86□□□□□ -0.03
SMPD4-202ENST00000409031 RAB1CQ92928 201 aa14.86□□□□□ -0.03
SMPD4-202ENST00000409031 NHP2Q9NX24 153 aaKnown RBP14.86□□□□□ -0.03
SMPD4-202ENST00000409031 SELLP14151 372 aa14.85□□□□□ -0.03
SMPD4-202ENST00000409031 GCSAMLQ5JQS6 135 aa14.85□□□□□ -0.03
SMPD4-202ENST00000409031 SIGLEC12Q96PQ1 595 aa14.85□□□□□ -0.03
SMPD4-202ENST00000409031 CST9LQ9H4G1 147 aa14.85□□□□□ -0.03
SMPD4-202ENST00000409031 ANOS1P23352 680 aa14.85□□□□□ -0.03
SMPD4-202ENST00000409031 OR4C13Q8NGP0 309 aa14.85□□□□□ -0.03
SMPD4-202ENST00000409031 DEPPQ9NTK1 212 aa14.85□□□□□ -0.03
SMPD4-202ENST00000409031 H3BTX0 84 aa14.85□□□□□ -0.03
SMPD4-202ENST00000409031 FLVCR1-AS1Q8TAF5 88 aa14.85□□□□□ -0.03
SMPD4-202ENST00000409031 MTCL1Q9Y4B5 1905 aaKnown RBP14.85□□□□□ -0.03
SMPD4-202ENST00000409031 IGKV1-12A0A0C4DH73 117 aa14.84□□□□□ -0.03
SMPD4-202ENST00000409031 IGKV1D-12P01611 117 aa14.84□□□□□ -0.03
SMPD4-202ENST00000409031 LGALS7P47929 136 aa14.84□□□□□ -0.03
SMPD4-202ENST00000409031 EMP1P54849 157 aa14.84□□□□□ -0.03
SMPD4-202ENST00000409031 TMEM78Q5T7P6 136 aa14.84□□□□□ -0.03
SMPD4-202ENST00000409031 RSPO3Q9BXY4 272 aaPredicted RBP14.84□□□□□ -0.03
SMPD4-202ENST00000409031 FAM157AC9JC47 383 aa14.84□□□□□ -0.03
SMPD4-202ENST00000409031 ESDP10768 282 aa14.84□□□□□ -0.03
SMPD4-202ENST00000409031 CX3CL1P78423 397 aa14.84□□□□□ -0.03
SMPD4-202ENST00000409031 SAMD5Q5TGI4 173 aa14.84□□□□□ -0.03
SMPD4-202ENST00000409031 TTTY12Q9BZ98 90 aa14.84□□□□□ -0.03
SMPD4-202ENST00000409031 A0A0G2JLM5 398 aa14.84□□□□□ -0.03
SMPD4-202ENST00000409031 TDGF1P13385 188 aa14.84□□□□□ -0.03
SMPD4-202ENST00000409031 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.84□□□□□ -0.03
SMPD4-202ENST00000409031 ZNF418Q8TF45 676 aaPredicted RBP14.84□□□□□ -0.03
SMPD4-202ENST00000409031 ICE1Q9Y2F5 2266 aa14.84□□□□□ -0.03
SMPD4-202ENST00000409031 PSG9Q00887 426 aa14.83□□□□□ -0.03
SMPD4-202ENST00000409031 RPL39P5Q59GN2 51 aa14.83□□□□□ -0.03
SMPD4-202ENST00000409031 OR4A5Q8NH83 315 aa14.83□□□□□ -0.03
SMPD4-202ENST00000409031 LYPD6BQ8NI32 183 aa14.83□□□□□ -0.03
SMPD4-202ENST00000409031 KLF14Q8TD94 323 aaPredicted RBP14.83□□□□□ -0.03
SMPD4-202ENST00000409031 C1RLQ9NZP8 487 aa14.83□□□□□ -0.03
SMPD4-202ENST00000409031 ASXL3Q9C0F0 2248 aa14.83□□□□□ -0.03
SMPD4-202ENST00000409031 MEF2CQ06413 473 aaPredicted RBP14.83□□□□□ -0.04
SMPD4-202ENST00000409031 OR52E5Q8NH55 327 aa14.83□□□□□ -0.04
SMPD4-202ENST00000409031 CCL13Q99616 98 aa14.83□□□□□ -0.04
SMPD4-202ENST00000409031 ARTNQ5T4W7 220 aa14.83□□□□□ -0.04
SMPD4-202ENST00000409031 RTN4RL2Q86UN3 420 aa14.83□□□□□ -0.04
SMPD4-202ENST00000409031 TMEM186Q96B77 213 aa14.83□□□□□ -0.04
SMPD4-202ENST00000409031 PPIHO43447 177 aaKnown RBP14.83□□□□□ -0.04
SMPD4-202ENST00000409031 ANAPC10Q9UM13 185 aa14.83□□□□□ -0.04
SMPD4-202ENST00000409031 M0QZ24 198 aa14.82□□□□□ -0.04
SMPD4-202ENST00000409031 ZNF837Q96EG3 531 aaPredicted RBP14.82□□□□□ -0.04
SMPD4-202ENST00000409031 TRBV20OR9-2A0A075B6H5 130 aa14.82□□□□□ -0.04
SMPD4-202ENST00000409031 BRWD3Q6RI45 1802 aa14.82□□□□□ -0.04
SMPD4-202ENST00000409031 DOCK3Q8IZD9 2030 aa14.82□□□□□ -0.04
SMPD4-202ENST00000409031 IGLC2P0DOY2 106 aa14.82□□□□□ -0.04
SMPD4-202ENST00000409031 IGLC3P0DOY3 106 aa14.82□□□□□ -0.04
SMPD4-202ENST00000409031 FCGR2BP31994 310 aaPredicted RBP14.82□□□□□ -0.04
SMPD4-202ENST00000409031 OSR1Q8TAX0 266 aaPredicted RBP14.82□□□□□ -0.04
SMPD4-202ENST00000409031 SIP14410 1827 aa14.82□□□□□ -0.04
SMPD4-202ENST00000409031 TMEM262E9PQX1 116 aa14.82□□□□□ -0.04
SMPD4-202ENST00000409031 FTH1P19P0C7X4 201 aa14.82□□□□□ -0.04
SMPD4-202ENST00000409031 CIARTQ8N365 385 aaPredicted RBP14.82□□□□□ -0.04
SMPD4-202ENST00000409031 TEX29Q8N6K0 151 aa14.82□□□□□ -0.04
SMPD4-202ENST00000409031 GGTLC1Q9BX51 225 aa14.82□□□□□ -0.04
SMPD4-202ENST00000409031 HBDP02042 147 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 TREML4Q6UXN2 200 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 CRIM1Q9NZV1 1036 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 CHCHD2Q9Y6H1 151 aaPredicted RBP14.81□□□□□ -0.04
SMPD4-202ENST00000409031 FAM90A9PA6NNJ1 464 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 LGALS3P17931 250 aaKnown RBP14.81□□□□□ -0.04
SMPD4-202ENST00000409031 WBP1Q96G27 269 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 FOXC2Q99958 501 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 ANAPC13Q9BS18 74 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 SDK2Q58EX2 2172 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 AREGP15514 252 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 PAX2Q02962 417 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 RAMP3O60896 148 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 GATA2P23769 480 aaPredicted RBP14.81□□□□□ -0.04
SMPD4-202ENST00000409031 ZNF788Q6ZQV5 615 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 LEAP2Q969E1 77 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 ZNF479Q96JC4 524 aa14.81□□□□□ -0.04
SMPD4-202ENST00000409031 TRAV24A0A0B4J272 114 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 FAM214BQ7L5A3 538 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 SBF1O95248 1867 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 IGKV1-5P01602 117 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 IGHV3-48P01763 117 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 CDPF1Q6NVV7 123 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 ZNF497Q6ZNH5 498 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 RNF144BQ7Z419 303 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 FADS6Q8N9I5 356 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 PPIAL4EA0A075B759 164 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 MMP23AO75900 390 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 MOSP00540 346 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 PRSS2P07478 247 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 PPIAL4FP0DN26 164 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 PCOLCEQ15113 449 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 DEFB109BQ30KR1 87 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 ACP7Q6ZNF0 438 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 EPDR1Q9UM22 224 aa14.8□□□□□ -0.04
SMPD4-202ENST00000409031 PPIAL4AQ9Y536 164 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms