RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 DPM2O94777 84 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 LDLRAD2Q5SZI1 272 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 RTN4RL2Q86UN3 420 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 SLC25A45Q8N413 288 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 TMEM101Q96IK0 257 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 SSBP4Q9BWG4 385 aaPredicted RBP10.92□□□□□ -0.66
RNF43-201ENST00000407977 IGKV3D-11A0A0A0MRZ8 115 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 LOXL4Q96JB6 756 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 SMPXQ9UHP9 88 aa10.92□□□□□ -0.66
RNF43-201ENST00000407977 AMBPP02760 352 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 SRSF7Q16629 238 aaKnown RBP eCLIP10.91□□□□□ -0.667e-7■■■■□ 22.3
RNF43-201ENST00000407977 RASL11AQ6T310 242 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 DNASE2BQ8WZ79 361 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 TMEM74BQ9NUR3 256 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 RNF115Q9Y4L5 304 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 IGHV1-69-2A0A0G2JMI3 117 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 PROB1E7EW31 1015 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 FADS6Q8N9I5 356 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 NUDT11Q96G61 164 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 NHP2Q9NX24 153 aaKnown RBP10.91□□□□□ -0.66
RNF43-201ENST00000407977 ELOVL5Q9NYP7 299 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 B9A039 149 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 TFF2Q03403 129 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 CFHR5Q9BXR6 569 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 C21orf62Q9NYP8 219 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 FABP5P3A8MUU1 101 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 M0R381 172 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 DLEU1O43261 78 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 ZNRF1Q8ND25 227 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 PILRBQ9UKJ0 227 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 WDR83OSQ9Y284 106 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 ARFGEF1Q9Y6D6 1849 aa10.91□□□□□ -0.66
RNF43-201ENST00000407977 IGKV1D-43A0A0B4J1Z2 117 aa10.9□□□□□ -0.66
RNF43-201ENST00000407977 LDLRAD4O15165 306 aa10.9□□□□□ -0.66
RNF43-201ENST00000407977 YPEL1O60688 119 aa10.9□□□□□ -0.66
RNF43-201ENST00000407977 CEACAM1P13688 526 aa10.9□□□□□ -0.66
RNF43-201ENST00000407977 LEPP41159 167 aa10.9□□□□□ -0.66
RNF43-201ENST00000407977 YPEL2Q96QA6 119 aa10.9□□□□□ -0.66
RNF43-201ENST00000407977 RNASE7Q9H1E1 156 aaKnown RBP10.9□□□□□ -0.66
RNF43-201ENST00000407977 EPDR1Q9UM22 224 aa10.9□□□□□ -0.66
RNF43-201ENST00000407977 CHCHD2Q9Y6H1 151 aaPredicted RBP10.9□□□□□ -0.66
RNF43-201ENST00000407977 ANKRD31Q8N7Z5 1873 aa10.9□□□□□ -0.66
RNF43-201ENST00000407977 PATE3B3GLJ2 98 aa10.9□□□□□ -0.66
RNF43-201ENST00000407977 IGHV3-48P01763 117 aa10.9□□□□□ -0.66
RNF43-201ENST00000407977 OR13A1Q8NGR1 328 aa10.9□□□□□ -0.66
RNF43-201ENST00000407977 ANAPC13Q9BS18 74 aa10.9□□□□□ -0.66
RNF43-201ENST00000407977 DPM3Q9P2X0 92 aa10.9□□□□□ -0.66
RNF43-201ENST00000407977 SAP25Q8TEE9 199 aa10.9□□□□□ -0.67
RNF43-201ENST00000407977 TSKUQ8WUA8 353 aa10.9□□□□□ -0.67
RNF43-201ENST00000407977 FNDC4Q9H6D8 234 aaPredicted RBP10.9□□□□□ -0.67
RNF43-201ENST00000407977 MCM3APO60318 1980 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 PVRIGQ6DKI7 326 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 YAE1D1Q9NRH1 226 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 C15orf61A6NNL5 157 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 UPK2O00526 184 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 SRSF1Q07955 248 aaKnown RBP eCLIP10.89□□□□□ -0.672e-7■■□□□ 11.6
RNF43-201ENST00000407977 ZNF585BQ52M93 769 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 OCC1Q8TAD7 63 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 MRPS18CQ9Y3D5 142 aaKnown RBP10.89□□□□□ -0.67
RNF43-201ENST00000407977 PTPRFP10586 1907 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 HOXA3O43365 443 aaPredicted RBP10.89□□□□□ -0.67
RNF43-201ENST00000407977 ORMDL2Q53FV1 153 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 REG4Q9BYZ8 158 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 RBMY1BA6NDE4 496 aaKnown RBP10.89□□□□□ -0.67
RNF43-201ENST00000407977 RBMY1EA6NEQ0 496 aaKnown RBP10.89□□□□□ -0.67
RNF43-201ENST00000407977 NAPSAO96009 420 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 RBMY1DP0C7P1 496 aaKnown RBP10.89□□□□□ -0.67
RNF43-201ENST00000407977 RBMY1A1P0DJD3 496 aaKnown RBP10.89□□□□□ -0.67
RNF43-201ENST00000407977 RBMY1CP0DJD4 496 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 ERVK11-1P61568 191 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 PRR7Q8TB68 274 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 SLC50A1Q9BRV3 221 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 LINC00312Q9Y6C7 94 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 LURAP1LQ8IV03 231 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 TIMP4Q99727 224 aa10.89□□□□□ -0.67
RNF43-201ENST00000407977 IQCF6A8MYZ5 107 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 SEMA5BQ9P283 1151 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 A8MWV9 139 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 DUX5Q96PT3 197 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 A0A0G2JLM5 398 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 ZNHIT1O43257 154 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 NDUFA3O95167 84 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 LHFPL1Q86WI0 220 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 COQ2Q96H96 371 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 ZNF479Q96JC4 524 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 CYTL1Q9NRR1 136 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 STRCP1A6NGW2 1772 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 C9JCJ5 164 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 FOXH1O75593 365 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 TIMP3P35625 211 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 CACNG7P62955 275 aa10.88□□□□□ -0.67
RNF43-201ENST00000407977 FOXA2Q9Y261 457 aaPredicted RBP10.88□□□□□ -0.67
RNF43-201ENST00000407977 FAM186AA6NE01 2351 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 FAM181BA6NEQ2 426 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 CTSBP07858 339 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 CNTFRP26992 372 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 CDCP2Q5VXM1 449 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 NUP37Q8NFH4 326 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 OR5AN1Q8NGI8 311 aa10.87□□□□□ -0.67
RNF43-201ENST00000407977 WFDC1Q9HC57 220 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms