RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 GGNBP1Q5YKI7 109 aa19.74■□□□□ 0.75
U2AF1-203ENST00000398137 C18orf65Q6ZTR6 163 aa19.74■□□□□ 0.75
U2AF1-203ENST00000398137 MARVELD1Q9BSK0 173 aa19.74■□□□□ 0.75
U2AF1-203ENST00000398137 PLEKHA3Q9HB20 300 aa19.74■□□□□ 0.75
U2AF1-203ENST00000398137 TMED3Q9Y3Q3 217 aa19.74■□□□□ 0.75
U2AF1-203ENST00000398137 NUDT19A8MXV4 375 aa19.73■□□□□ 0.75
U2AF1-203ENST00000398137 IL5P05113 134 aa19.73■□□□□ 0.75
U2AF1-203ENST00000398137 CTRB1P17538 263 aa19.73■□□□□ 0.75
U2AF1-203ENST00000398137 AARDQ4LEZ3 155 aa19.73■□□□□ 0.75
U2AF1-203ENST00000398137 CTRB2Q6GPI1 263 aa19.73■□□□□ 0.75
U2AF1-203ENST00000398137 HSD17B13Q7Z5P4 300 aaPredicted RBP19.73■□□□□ 0.75
U2AF1-203ENST00000398137 A0A1B0GU03 582 aa19.72■□□□□ 0.75
U2AF1-203ENST00000398137 CRYGCP07315 174 aa19.72■□□□□ 0.75
U2AF1-203ENST00000398137 KIAA0141Q14154 515 aaPredicted RBP19.72■□□□□ 0.75
U2AF1-203ENST00000398137 ETV3LQ6ZN32 361 aa19.72■□□□□ 0.75
U2AF1-203ENST00000398137 UXS1Q8NBZ7 420 aa19.72■□□□□ 0.75
U2AF1-203ENST00000398137 KLHL30-AS1Q8NEE0 82 aa19.72■□□□□ 0.75
U2AF1-203ENST00000398137 OR1S1Q8NH92 325 aa19.72■□□□□ 0.75
U2AF1-203ENST00000398137 SLA2Q9H6Q3 261 aa19.72■□□□□ 0.75
U2AF1-203ENST00000398137 ZFP57Q9NU63 452 aa19.72■□□□□ 0.75
U2AF1-203ENST00000398137 AURKAIP1Q9NWT8 199 aaPredicted RBP19.72■□□□□ 0.75
U2AF1-203ENST00000398137 HOXA1P49639 335 aaPredicted RBP19.71■□□□□ 0.75
U2AF1-203ENST00000398137 MRPL41Q8IXM3 137 aaKnown RBP19.71■□□□□ 0.75
U2AF1-203ENST00000398137 C12orf45Q8N5I9 185 aaPredicted RBP19.71■□□□□ 0.75
U2AF1-203ENST00000398137 ZNF491Q8N8L2 437 aa19.71■□□□□ 0.75
U2AF1-203ENST00000398137 GNB4Q9HAV0 340 aa19.71■□□□□ 0.75
U2AF1-203ENST00000398137 GPN1Q9HCN4 374 aaPredicted RBP19.71■□□□□ 0.75
U2AF1-203ENST00000398137 PRAF2O60831 178 aa19.7■□□□□ 0.74
U2AF1-203ENST00000398137 IFNA21P01568 189 aa19.7■□□□□ 0.74
U2AF1-203ENST00000398137 DEFA4P12838 97 aa19.7■□□□□ 0.74
U2AF1-203ENST00000398137 CD33P20138 364 aa19.7■□□□□ 0.74
U2AF1-203ENST00000398137 SPCS3P61009 180 aa19.7■□□□□ 0.74
U2AF1-203ENST00000398137 RHOGP84095 191 aa19.7■□□□□ 0.74
U2AF1-203ENST00000398137 OR5B12Q96R08 314 aa19.7■□□□□ 0.74
U2AF1-203ENST00000398137 MPTX1A8MV57 137 aa19.69■□□□□ 0.74
U2AF1-203ENST00000398137 BRI3O95415 125 aa19.69■□□□□ 0.74
U2AF1-203ENST00000398137 DHFRP00374 187 aa19.69■□□□□ 0.74
U2AF1-203ENST00000398137 SLC25A6P12236 298 aa19.69■□□□□ 0.74
U2AF1-203ENST00000398137 RGS21Q2M5E4 152 aa19.69■□□□□ 0.74
U2AF1-203ENST00000398137 REC114Q7Z4M0 266 aa19.69■□□□□ 0.74
U2AF1-203ENST00000398137 OR52E5Q8NH55 327 aa19.69■□□□□ 0.74
U2AF1-203ENST00000398137 UBE2E2Q96LR5 201 aa19.69■□□□□ 0.74
U2AF1-203ENST00000398137 ENY2Q9NPA8 101 aa19.69■□□□□ 0.74
U2AF1-203ENST00000398137 CEBPZOSA8MTT3 80 aa19.68■□□□□ 0.74
U2AF1-203ENST00000398137 CCSO14618 274 aa19.68■□□□□ 0.74
U2AF1-203ENST00000398137 OR2J3O76001 311 aa19.68■□□□□ 0.74
U2AF1-203ENST00000398137 IGHV3-11P01762 117 aa19.68■□□□□ 0.74
U2AF1-203ENST00000398137 CDX1P47902 265 aaPredicted RBP19.68■□□□□ 0.74
U2AF1-203ENST00000398137 C8orf86Q6ZUL3 223 aa19.68■□□□□ 0.74
U2AF1-203ENST00000398137 OR2C3Q8N628 320 aa19.68■□□□□ 0.74
U2AF1-203ENST00000398137 LINC00482Q8N8I6 264 aa19.68■□□□□ 0.74
U2AF1-203ENST00000398137 FANCD2OSQ96PS1 177 aa19.68■□□□□ 0.74
U2AF1-203ENST00000398137 TRBV9A0A0B4J1U6 114 aa19.67■□□□□ 0.74
U2AF1-203ENST00000398137 PITX3O75364 302 aa19.67■□□□□ 0.74
U2AF1-203ENST00000398137 PF4P02776 101 aa19.67■□□□□ 0.74
U2AF1-203ENST00000398137 TNFRSF9Q07011 255 aa19.67■□□□□ 0.74
U2AF1-203ENST00000398137 C11orf87Q6NUJ2 197 aa19.67■□□□□ 0.74
U2AF1-203ENST00000398137 C4orf3Q8WVX3 66 aa19.67■□□□□ 0.74
U2AF1-203ENST00000398137 HSPB7Q9UBY9 170 aa19.67■□□□□ 0.74
U2AF1-203ENST00000398137 DMRT1Q9Y5R6 373 aa19.67■□□□□ 0.74
U2AF1-203ENST00000398137 F11RQ9Y624 299 aaKnown RBP19.67■□□□□ 0.74
U2AF1-203ENST00000398137 IGLV11-55A0A075B6I3 123 aa19.66■□□□□ 0.74
U2AF1-203ENST00000398137 C13orf42A0A1B0GVH6 325 aa19.66■□□□□ 0.74
U2AF1-203ENST00000398137 FAM223BA6NKX1 122 aa19.66■□□□□ 0.74
U2AF1-203ENST00000398137 ERHP84090 104 aaKnown RBP19.66■□□□□ 0.74
U2AF1-203ENST00000398137 DEFB136Q30KP8 78 aa19.66■□□□□ 0.74
U2AF1-203ENST00000398137 FAM223AQ8IWN6 122 aa19.66■□□□□ 0.74
U2AF1-203ENST00000398137 P2RX4Q99571 388 aa19.66■□□□□ 0.74
U2AF1-203ENST00000398137 CACFD1Q9UGQ2 172 aa19.66■□□□□ 0.74
U2AF1-203ENST00000398137 FBXL7Q9UJT9 491 aa19.66■□□□□ 0.74
U2AF1-203ENST00000398137 SNRPGP15A8MWD9 76 aa19.65■□□□□ 0.74
U2AF1-203ENST00000398137 HIST1H1BP16401 226 aaKnown RBP19.65■□□□□ 0.74
U2AF1-203ENST00000398137 MFAP2P55001 183 aa19.65■□□□□ 0.74
U2AF1-203ENST00000398137 NECAP1Q8NC96 275 aa19.65■□□□□ 0.74
U2AF1-203ENST00000398137 MRAPQ8TCY5 172 aa19.65■□□□□ 0.74
U2AF1-203ENST00000398137 RBKSQ9H477 322 aa19.65■□□□□ 0.74
U2AF1-203ENST00000398137 A0A0G2JLM5 398 aa19.64■□□□□ 0.73
U2AF1-203ENST00000398137 FAM25EA8MYX2 175 aa19.64■□□□□ 0.73
U2AF1-203ENST00000398137 INS-IGF2F8WCM5 200 aa19.64■□□□□ 0.73
U2AF1-203ENST00000398137 NDUFB8O95169 186 aa19.64■□□□□ 0.73
U2AF1-203ENST00000398137 LGALS1P09382 135 aaKnown RBP19.64■□□□□ 0.73
U2AF1-203ENST00000398137 KRTAP10-11P60412 298 aa19.64■□□□□ 0.73
U2AF1-203ENST00000398137 TATDN3Q17R31 274 aa19.64■□□□□ 0.73
U2AF1-203ENST00000398137 IAH1Q2TAA2 248 aaPredicted RBP19.64■□□□□ 0.73
U2AF1-203ENST00000398137 ZNF114Q8NC26 417 aa19.64■□□□□ 0.73
U2AF1-203ENST00000398137 USMG5Q96IX5 58 aa19.64■□□□□ 0.73
U2AF1-203ENST00000398137 OR10C1Q96KK4 312 aa19.64■□□□□ 0.73
U2AF1-203ENST00000398137 DUX3Q96PT4 197 aa19.64■□□□□ 0.73
U2AF1-203ENST00000398137 SNCAP37840 140 aa19.63■□□□□ 0.73
U2AF1-203ENST00000398137 ATP5G2Q06055 141 aa19.63■□□□□ 0.73
U2AF1-203ENST00000398137 EXOSC2Q13868 293 aaKnown RBP19.63■□□□□ 0.73
U2AF1-203ENST00000398137 KLK9Q2XQG4 91 aa19.63■□□□□ 0.73
U2AF1-203ENST00000398137 C15orf32Q32M92 178 aa19.63■□□□□ 0.73
U2AF1-203ENST00000398137 SLC25A24Q6NUK1 477 aa19.63■□□□□ 0.73
U2AF1-203ENST00000398137 OR1P1Q8NH06 330 aa19.63■□□□□ 0.73
U2AF1-203ENST00000398137 HEYLQ9NQ87 328 aaPredicted RBP19.63■□□□□ 0.73
U2AF1-203ENST00000398137 KLK9Q9UKQ9 250 aa19.63■□□□□ 0.73
U2AF1-203ENST00000398137 I3L521 148 aa19.62■□□□□ 0.73
U2AF1-203ENST00000398137 CYB5BO43169 146 aa19.62■□□□□ 0.73
U2AF1-203ENST00000398137 ZBTB8BQ8NAP8 495 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms