RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 MED12LQ86YW9 2145 aa0.86□□□□□ -2.27
CMC1-202ENST00000396610 TTC21AQ8NDW8 1320 aa0.86□□□□□ -2.27
CMC1-202ENST00000396610 HCRTO43612 131 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 STX5Q13190 355 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 ZNF846Q147U1 533 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 CDK10Q15131 360 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 AADACL3Q5VUY0 350 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 LPCAT4Q643R3 524 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.85□□□□□ -2.27
CMC1-202ENST00000396610 CPAMD8Q8IZJ3 1885 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 LINC00471Q8N535 108 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 C12orf29Q8N999 325 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 MCFD2Q8NI22 146 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 DDI1Q8WTU0 396 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 RASSF5Q8WWW0 418 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 KLK6Q92876 244 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 PTH2Q96A98 100 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 OPTNQ96CV9 577 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 DERL1Q9BUN8 251 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 MRPS26Q9BYN8 205 aaKnown RBP0.85□□□□□ -2.27
CMC1-202ENST00000396610 WDR61Q9GZS3 305 aaKnown RBP0.85□□□□□ -2.27
CMC1-202ENST00000396610 TRABDQ9H4I3 376 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 OR5AC2Q9NZP5 309 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 PTPRSQ13332 1948 aa0.85□□□□□ -2.27
CMC1-202ENST00000396610 EEF1E1-BLOC1S5C9J1V9 151 aa0.84□□□□□ -2.27
CMC1-202ENST00000396610 SHBGP04278 402 aa0.84□□□□□ -2.27
CMC1-202ENST00000396610 CALB1P05937 261 aa0.84□□□□□ -2.27
CMC1-202ENST00000396610 OR5G3P0C626 314 aa0.84□□□□□ -2.27
CMC1-202ENST00000396610 CDKL4Q5MAI5 379 aa0.84□□□□□ -2.27
CMC1-202ENST00000396610 IQCF2Q8IXL9 164 aa0.84□□□□□ -2.27
CMC1-202ENST00000396610 ZNF565Q8N9K5 539 aa0.84□□□□□ -2.27
CMC1-202ENST00000396610 AQP3Q92482 292 aa0.84□□□□□ -2.27
CMC1-202ENST00000396610 ROS1P08922 2347 aa0.84□□□□□ -2.28
CMC1-202ENST00000396610 CACNA1BQ00975 2339 aa0.84□□□□□ -2.28
CMC1-202ENST00000396610 SMARCA4P51532 1647 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 HEATR5AQ86XA9 2040 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 TNNC2P02585 160 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 HTR1AP08908 422 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 HIST1H2BOP23527 126 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 HIST1H2BBP33778 126 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 HIST1H2BDP58876 126 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 MAGOHP61326 146 aaKnown RBP0.83□□□□□ -2.28
CMC1-202ENST00000396610 HIST1H2BCP62807 126 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 HBA1P69905 142 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 HIST2H2BEQ16778 126 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.83□□□□□ -2.28
CMC1-202ENST00000396610 RPL22L1Q6P5R6 122 aaKnown RBP0.83□□□□□ -2.28
CMC1-202ENST00000396610 ALKAL1Q6UXT8 129 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 Q6ZS49 121 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 BPIFA4PQ86YQ2 179 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 FAM19A2Q8N3H0 131 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 HIST1H2BHQ93079 126 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 HIST1H2BNQ99877 126 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 HIST1H2BMQ99879 126 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 CMTM6Q9NX76 183 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 CKLFQ9UBR5 152 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 GREB1Q4ZG55 1949 aa0.83□□□□□ -2.28
CMC1-202ENST00000396610 TGIF2-C20orf24A0A0A6YYL0 155 aa0.82□□□□□ -2.28
CMC1-202ENST00000396610 FUOMA2VDF0 154 aa0.82□□□□□ -2.28
CMC1-202ENST00000396610 KCNK1O00180 336 aa0.82□□□□□ -2.28
CMC1-202ENST00000396610 GEMIN2O14893 280 aaKnown RBP0.82□□□□□ -2.28
CMC1-202ENST00000396610 OR5F1O95221 314 aa0.82□□□□□ -2.28
CMC1-202ENST00000396610 CLPSP04118 112 aa0.82□□□□□ -2.28
CMC1-202ENST00000396610 RNASE3P12724 160 aaKnown RBP0.82□□□□□ -2.28
CMC1-202ENST00000396610 UBE2IP63279 158 aaKnown RBP0.82□□□□□ -2.28
CMC1-202ENST00000396610 HIST3H3Q16695 136 aa0.82□□□□□ -2.28
CMC1-202ENST00000396610 SPANXN3Q5MJ09 141 aa0.82□□□□□ -2.28
CMC1-202ENST00000396610 CCDC122Q5T0U0 273 aa0.82□□□□□ -2.28
CMC1-202ENST00000396610 C20orf196Q8IYI0 205 aa0.82□□□□□ -2.28
CMC1-202ENST00000396610 MRPL30Q8TCC3 161 aaKnown RBP0.82□□□□□ -2.28
CMC1-202ENST00000396610 SLC35B4Q969S0 331 aa0.82□□□□□ -2.28
CMC1-202ENST00000396610 SCGB3A1Q96QR1 104 aa0.82□□□□□ -2.28
CMC1-202ENST00000396610 HEATR5BQ9P2D3 2071 aa0.81□□□□□ -2.28
CMC1-202ENST00000396610 HLA-DRB1P01911 266 aa0.81□□□□□ -2.28
CMC1-202ENST00000396610 TEX36Q5VZQ5 186 aa0.81□□□□□ -2.28
CMC1-202ENST00000396610 C8orf74Q6P047 294 aa0.81□□□□□ -2.28
CMC1-202ENST00000396610 DPPA3Q6W0C5 159 aa0.81□□□□□ -2.28
CMC1-202ENST00000396610 Q6ZQT0 140 aa0.81□□□□□ -2.28
CMC1-202ENST00000396610 C1orf158Q8N1D5 194 aa0.81□□□□□ -2.28
CMC1-202ENST00000396610 OR13C4Q8NGS5 318 aa0.81□□□□□ -2.28
CMC1-202ENST00000396610 OR52E6Q96RD3 313 aa0.81□□□□□ -2.28
CMC1-202ENST00000396610 GINS4Q9BRT9 223 aa0.81□□□□□ -2.28
CMC1-202ENST00000396610 C22orf24Q9Y442 160 aa0.81□□□□□ -2.28
CMC1-202ENST00000396610 NCOA6Q14686 2063 aaPredicted RBP0.8□□□□□ -2.28
CMC1-202ENST00000396610 DLG5Q8TDM6 1919 aa0.8□□□□□ -2.28
CMC1-202ENST00000396610 IFNA5P01569 189 aa0.8□□□□□ -2.28
CMC1-202ENST00000396610 IGKV1-5P01602 117 aa0.8□□□□□ -2.28
CMC1-202ENST00000396610 HIST1H1EP10412 219 aaKnown RBP0.8□□□□□ -2.28
CMC1-202ENST00000396610 SPCS3P61009 180 aa0.8□□□□□ -2.28
CMC1-202ENST00000396610 DEFB115Q30KQ5 88 aa0.8□□□□□ -2.28
CMC1-202ENST00000396610 ZNF826PQ6ZT77 177 aa0.8□□□□□ -2.28
CMC1-202ENST00000396610 DEFB128Q7Z7B8 93 aa0.8□□□□□ -2.28
CMC1-202ENST00000396610 CLVS1Q8IUQ0 354 aaPredicted RBP0.8□□□□□ -2.28
CMC1-202ENST00000396610 LRRC25Q8N386 305 aaPredicted RBP0.8□□□□□ -2.28
CMC1-202ENST00000396610 TMEM86BQ8N661 226 aa0.8□□□□□ -2.28
CMC1-202ENST00000396610 OR4D11Q8NGI4 311 aa0.8□□□□□ -2.28
CMC1-202ENST00000396610 PFN4Q8NHR9 129 aa0.8□□□□□ -2.28
CMC1-202ENST00000396610 IMP4Q96G21 291 aaKnown RBP0.8□□□□□ -2.28
CMC1-202ENST00000396610 PPP1R2P1Q96PQ5 205 aa0.8□□□□□ -2.28
CMC1-202ENST00000396610 MRPL57Q9BQC6 102 aaKnown RBP0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms