RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 SAA2-SAA4A0A096LPE2 208 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 IGHV1-46P01743 117 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 SAA2P0DJI9 122 aaPredicted RBP13.07□□□□□ -0.32
GNE-202ENST00000396594 CDX1P47902 265 aaPredicted RBP13.07□□□□□ -0.32
GNE-202ENST00000396594 ATP5L2Q7Z4Y8 100 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 PUSL1Q8N0Z8 303 aaKnown RBP13.07□□□□□ -0.32
GNE-202ENST00000396594 TBX15Q96SF7 602 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 IZUMO1RA6ND01 250 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 B4DSR2 109 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 SAA1P0DJI8 122 aaPredicted RBP13.07□□□□□ -0.32
GNE-202ENST00000396594 CCL20P78556 96 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 ID3Q02535 119 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 PGLYRP4Q96LB8 373 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 VCX2Q9H322 139 aa13.07□□□□□ -0.32
GNE-202ENST00000396594 IGKV3-7A0A075B6H7 116 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 F2Z2F3 143 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 ADIPOQQ15848 244 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 USMG5Q96IX5 58 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 SCN3AQ9NY46 2000 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 RRHO14718 337 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 ZNF56Q15929 161 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 RASL11AQ6T310 242 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 WNT10AQ9GZT5 417 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 RAXQ9Y2V3 346 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 TRAV21A0A0B4J279 112 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 PLPPR1Q8TBJ4 325 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 NYNRINQ9P2P1 1898 aaKnown RBP13.06□□□□□ -0.32
GNE-202ENST00000396594 F8VVB4 439 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 F8VWA3 439 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 K7ERU9 68 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 FABP2P12104 132 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 COLCA1Q6ZS62 124 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 C1QL2Q7Z5L3 287 aa13.06□□□□□ -0.32
GNE-202ENST00000396594 FABP5P3A8MUU1 101 aa13.05□□□□□ -0.32
GNE-202ENST00000396594 HTN1P15515 57 aa13.05□□□□□ -0.32
GNE-202ENST00000396594 APELAP0DMC3 54 aa13.05□□□□□ -0.32
GNE-202ENST00000396594 DUTP33316 252 aaKnown RBP13.05□□□□□ -0.32
GNE-202ENST00000396594 NCMAPQ5T1S8 102 aa13.05□□□□□ -0.32
GNE-202ENST00000396594 LY96Q9Y6Y9 160 aa13.05□□□□□ -0.32
GNE-202ENST00000396594 DOCK3Q8IZD9 2030 aa13.05□□□□□ -0.32
GNE-202ENST00000396594 J3KRW8 73 aa13.05□□□□□ -0.32
GNE-202ENST00000396594 HSPB9Q9BQS6 159 aa13.05□□□□□ -0.32
GNE-202ENST00000396594 TRAV1-1A0A0B4J248 108 aa13.05□□□□□ -0.32
GNE-202ENST00000396594 ICAM4Q14773 271 aa13.05□□□□□ -0.32
GNE-202ENST00000396594 LYPD1Q8N2G4 141 aa13.05□□□□□ -0.32
GNE-202ENST00000396594 LYZL4Q96KX0 146 aa13.05□□□□□ -0.32
GNE-202ENST00000396594 ZNF250P15622 560 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 TMEM167AQ8TBQ9 72 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 MBD3L1Q8WWY6 194 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 TRAV24A0A0B4J272 114 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 FAM223BA6NKX1 122 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 TGFAP01135 160 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 TFPI2P48307 235 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 FAM223AQ8IWN6 122 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 VN1R17PQ8TDU5 208 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 FHITP49789 147 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 TMEM183AQ8IXX5 376 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 TRBV7-1A0A0A6YYK4 115 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 ZNF502Q8TBZ5 544 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 RNF125Q96EQ8 232 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 WDR83OSQ9Y284 106 aa13.04□□□□□ -0.32
GNE-202ENST00000396594 TRBV20OR9-2A0A075B6H5 130 aa13.03□□□□□ -0.32
GNE-202ENST00000396594 CLPSP04118 112 aa13.03□□□□□ -0.32
GNE-202ENST00000396594 SRP19P09132 144 aaKnown RBP13.03□□□□□ -0.32
GNE-202ENST00000396594 ASCL4Q6XD76 172 aa13.03□□□□□ -0.32
GNE-202ENST00000396594 YAE1D1Q9NRH1 226 aa13.03□□□□□ -0.32
GNE-202ENST00000396594 TMEM242Q9NWH2 141 aa13.03□□□□□ -0.32
GNE-202ENST00000396594 C8orf46Q8TAG6 207 aa13.03□□□□□ -0.32
GNE-202ENST00000396594 SDHCQ99643 169 aaPredicted RBP13.03□□□□□ -0.32
GNE-202ENST00000396594 TMEM178BH3BS89 294 aa13.03□□□□□ -0.32
GNE-202ENST00000396594 HINT1P49773 126 aaPredicted RBP13.03□□□□□ -0.32
GNE-202ENST00000396594 LHFPL1Q86WI0 220 aa13.03□□□□□ -0.32
GNE-202ENST00000396594 OR4D5Q8NGN0 318 aa13.03□□□□□ -0.32
GNE-202ENST00000396594 TRGV9Q99603 122 aa13.03□□□□□ -0.32
GNE-202ENST00000396594 OR11H12B2RN74 326 aa13.02□□□□□ -0.32
GNE-202ENST00000396594 IGFBP2P18065 325 aa13.02□□□□□ -0.32
GNE-202ENST00000396594 FER1L6-AS1Q8NA97 138 aa13.02□□□□□ -0.32
GNE-202ENST00000396594 OR11H1Q8NG94 326 aa13.02□□□□□ -0.32
GNE-202ENST00000396594 OR11H2Q8NH07 326 aa13.02□□□□□ -0.32
GNE-202ENST00000396594 CCDC88CQ9P219 2028 aa13.02□□□□□ -0.32
GNE-202ENST00000396594 LDLRAD4O15165 306 aa13.02□□□□□ -0.33
GNE-202ENST00000396594 SMIM12Q96EX1 92 aa13.02□□□□□ -0.33
GNE-202ENST00000396594 FOXI3A8MTJ6 420 aaPredicted RBP13.02□□□□□ -0.33
GNE-202ENST00000396594 OTX1P32242 354 aaPredicted RBP13.02□□□□□ -0.33
GNE-202ENST00000396594 UNQ6494/PRO21346Q6UXR6 183 aa13.02□□□□□ -0.33
GNE-202ENST00000396594 MTURNQ8N3F0 131 aa13.02□□□□□ -0.33
GNE-202ENST00000396594 Q9H3A6 140 aa13.02□□□□□ -0.33
GNE-202ENST00000396594 AMBPP02760 352 aa13.02□□□□□ -0.33
GNE-202ENST00000396594 SPINK2P20155 84 aa13.02□□□□□ -0.33
GNE-202ENST00000396594 SRIP30626 198 aa13.02□□□□□ -0.33
GNE-202ENST00000396594 NXT2Q9NPJ8 142 aaKnown RBP13.02□□□□□ -0.33
GNE-202ENST00000396594 DOCK6Q96HP0 2047 aa13.01□□□□□ -0.33
GNE-202ENST00000396594 IGKV1-9A0A0C4DH69 117 aa13.01□□□□□ -0.33
GNE-202ENST00000396594 SPATA45Q537H7 98 aa13.01□□□□□ -0.33
GNE-202ENST00000396594 ORMDL3Q8N138 153 aa13.01□□□□□ -0.33
GNE-202ENST00000396594 MGAMO43451 1857 aa13.01□□□□□ -0.33
GNE-202ENST00000396594 ARID1BQ8NFD5 2236 aaPredicted RBP13.01□□□□□ -0.33
GNE-202ENST00000396594 PRSS2P07478 247 aa13.01□□□□□ -0.33
GNE-202ENST00000396594 ZNF672Q499Z4 452 aaPredicted RBP13.01□□□□□ -0.33
GNE-202ENST00000396594 TPTE2P1Q5T6R2 138 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms