RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 LAX1Q8IWV1 398 aa6.61□□□□□ -1.35
ATG4A-205ENST00000394892 VN1R17PQ8TDU5 208 aa6.61□□□□□ -1.35
ATG4A-205ENST00000394892 DYNLRB2Q8TF09 96 aa6.61□□□□□ -1.35
ATG4A-205ENST00000394892 TMEM190Q8WZ59 177 aa6.61□□□□□ -1.35
ATG4A-205ENST00000394892 CXorf58Q96LI9 332 aa6.61□□□□□ -1.35
ATG4A-205ENST00000394892 TP53RKQ96S44 253 aa6.61□□□□□ -1.35
ATG4A-205ENST00000394892 HINT2Q9BX68 163 aa6.61□□□□□ -1.35
ATG4A-205ENST00000394892 TUBA4BQ9H853 241 aa6.61□□□□□ -1.35
ATG4A-205ENST00000394892 TECRQ9NZ01 308 aaKnown RBP6.61□□□□□ -1.35
ATG4A-205ENST00000394892 EXTL2Q9UBQ6 330 aa6.61□□□□□ -1.35
ATG4A-205ENST00000394892 MTFP1Q9UDX5 166 aa6.61□□□□□ -1.35
ATG4A-205ENST00000394892 CEPT1Q9Y6K0 416 aa6.61□□□□□ -1.35
ATG4A-205ENST00000394892 EPPK1P58107 5090 aaKnown RBP6.61□□□□□ -1.35
ATG4A-205ENST00000394892 HYDINQ4G0P3 5121 aa6.61□□□□□ -1.35
ATG4A-205ENST00000394892 SCAF4O95104 1147 aaKnown RBP6.6□□□□□ -1.35
ATG4A-205ENST00000394892 DHFRP00374 187 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 IGHV3-48P01763 117 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 CD74P04233 296 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 CTSGP08311 255 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 ERVK-16P61578 105 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 RND3P61587 244 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 TSPAN5P62079 268 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 FAM106AQ4KMX7 169 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 SPINK9Q5DT21 86 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 ZNF57Q68EA5 555 aaPredicted RBP6.6□□□□□ -1.35
ATG4A-205ENST00000394892 FAAP20Q6NZ36 180 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 Q6ZRM9 215 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 CMTM1Q8IZ96 169 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 OR2C3Q8N628 320 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 LSM10Q969L4 123 aaKnown RBP6.6□□□□□ -1.35
ATG4A-205ENST00000394892 SRD5A3Q9H8P0 318 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 FAM212BQ9NTI7 297 aaPredicted RBP6.6□□□□□ -1.35
ATG4A-205ENST00000394892 PRNDQ9UKY0 176 aa6.6□□□□□ -1.35
ATG4A-205ENST00000394892 SMIM31A0A1B0GVY4 71 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 FAM25AB3EWG3 89 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 FAM25CB3EWG5 89 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 FAM25GB3EWG6 89 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 ZNF207O43670 478 aaKnown RBP6.59□□□□□ -1.35
ATG4A-205ENST00000394892 TPPPO94811 219 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 SP6Q3SY56 376 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 PVRIGQ6DKI7 326 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 THOC7Q6I9Y2 204 aaKnown RBP6.59□□□□□ -1.35
ATG4A-205ENST00000394892 PLET1Q6UQ28 207 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 SLC38A6Q8IZM9 456 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 LILRB2Q8N423 598 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 OR1P1Q8NH06 330 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 OR5B3Q8NH48 314 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 LHFPL5Q8TAF8 219 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 BORCS5Q969J3 196 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 C21orf62Q9NYP8 219 aa6.59□□□□□ -1.35
ATG4A-205ENST00000394892 MRPL36Q9P0J6 103 aaKnown RBP6.59□□□□□ -1.35
ATG4A-205ENST00000394892 SNAPC5O75971 98 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 PPP5CP53041 499 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 ELLP55199 621 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-205ENST00000394892 PIGPP57054 158 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 HSPE1P61604 102 aaKnown RBP6.58□□□□□ -1.36
ATG4A-205ENST00000394892 PRCDQ00LT1 54 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 EWSR1Q01844 656 aaKnown RBP eCLIP6.58□□□□□ -1.36
ATG4A-205ENST00000394892 MLANAQ16655 118 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 ODF3L2Q3SX64 289 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 LPCAT3Q6P1A2 487 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 MZT2AQ6P582 158 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 HSD17B13Q7Z5P4 300 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-205ENST00000394892 TMEM229BQ8NBD8 167 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 ZNF114Q8NC26 417 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 OR13C8Q8NGS7 320 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 DYNC2LI1Q8TCX1 351 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 BSCL2Q96G97 398 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-205ENST00000394892 SOSTQ9BQB4 213 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 OVOL2Q9BRP0 275 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 RTBDNQ9BSG5 229 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-205ENST00000394892 MRPS26Q9BYN8 205 aaKnown RBP6.58□□□□□ -1.36
ATG4A-205ENST00000394892 SLC2A8Q9NY64 477 aa6.58□□□□□ -1.36
ATG4A-205ENST00000394892 MRPL27Q9P0M9 148 aaKnown RBP6.58□□□□□ -1.36
ATG4A-205ENST00000394892 BIRC6Q9NR09 4857 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 TRAV25A0A0B4J276 109 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 NDUFA4O00483 81 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 ST8SIA3O43173 380 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 MT-CO2P00403 227 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 PGAM2P15259 253 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 UCP1P25874 307 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 FCGR2BP31994 310 aaPredicted RBP6.57□□□□□ -1.36
ATG4A-205ENST00000394892 RNASE10Q5GAN6 216 aaKnown RBP6.57□□□□□ -1.36
ATG4A-205ENST00000394892 H2BFWTQ7Z2G1 175 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 ARRDC1Q8N5I2 433 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 TERB2Q8NHR7 220 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 MARCH1Q8TCQ1 289 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 MARC2Q969Z3 335 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 ATP6V0BQ99437 205 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 TSC22D3Q99576 134 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 C5orf66Q9H5L9 145 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 FNDC4Q9H6D8 234 aaPredicted RBP6.57□□□□□ -1.36
ATG4A-205ENST00000394892 UBQLN2Q9UHD9 624 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 SMPXQ9UHP9 88 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 UFC1Q9Y3C8 167 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 ALMS1Q8TCU4 4167 aa6.57□□□□□ -1.36
ATG4A-205ENST00000394892 IGHV3-49A0A0A0MS15 119 aa6.56□□□□□ -1.36
ATG4A-205ENST00000394892 C3orf85A0A1B0GTC6 90 aa6.56□□□□□ -1.36
ATG4A-205ENST00000394892 INS-IGF2F8WCM5 200 aa6.56□□□□□ -1.36
ATG4A-205ENST00000394892 GABARAPH6UMI1 98 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms