RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 OR1L8Q8NGR8 309 aa13.36□□□□□ -0.27
PCDH1-203ENST00000394536 PAXXQ9BUH6 204 aa13.36□□□□□ -0.27
PCDH1-203ENST00000394536 TFPI2P48307 235 aa13.36□□□□□ -0.27
PCDH1-203ENST00000394536 RNF151Q2KHN1 245 aa13.36□□□□□ -0.27
PCDH1-203ENST00000394536 SPATA45Q537H7 98 aa13.36□□□□□ -0.27
PCDH1-203ENST00000394536 ASPHD1Q5U4P2 390 aa13.36□□□□□ -0.27
PCDH1-203ENST00000394536 EAF1Q96JC9 268 aaPredicted RBP13.36□□□□□ -0.27
PCDH1-203ENST00000394536 ZNRD1Q9P1U0 126 aa13.36□□□□□ -0.27
PCDH1-203ENST00000394536 NDUFB3O43676 98 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 GFRA3O60609 400 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 CT45A6P0DMU7 189 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 CT45A5P0DMU8 189 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 CT45A7P0DMV0 189 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 NPPCP23582 126 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 CT45A1Q5HYN5 189 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 Q6ZR03 302 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 OR10W1Q8NGF6 305 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 CT45A3Q8NHU0 189 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 AMMECR1Q9Y4X0 333 aaPredicted RBP13.35□□□□□ -0.27
PCDH1-203ENST00000394536 TCF21O43680 179 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 C8orf88P0DMB2 117 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 KIR2DL2P43627 348 aaPredicted RBP13.35□□□□□ -0.27
PCDH1-203ENST00000394536 HES1Q14469 280 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 VAMP3Q15836 100 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 PDPNQ86YL7 162 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 CPAMD8Q8IZJ3 1885 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 RBP4P02753 201 aa13.35□□□□□ -0.27
PCDH1-203ENST00000394536 HINT1P49773 126 aaPredicted RBP13.35□□□□□ -0.27
PCDH1-203ENST00000394536 RBM14Q96PK6 669 aaKnown RBP13.35□□□□□ -0.27
PCDH1-203ENST00000394536 TECTAO75443 2155 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 M0R296 226 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 FAM27E3Q08E93 113 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 TNXAQ16473 311 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 KRTCAP3Q53RY4 240 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 PEAR1Q5VY43 1037 aaPredicted RBP13.34□□□□□ -0.27
PCDH1-203ENST00000394536 OR2T6Q8NHC8 308 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 AP1S3Q96PC3 154 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 C20orf202A1L168 122 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 SLC25A17O43808 307 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 FOXA3P55318 350 aaPredicted RBP13.34□□□□□ -0.27
PCDH1-203ENST00000394536 GAL3ST2Q9H3Q3 398 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 SLC25A10Q9UBX3 287 aaPredicted RBP13.34□□□□□ -0.27
PCDH1-203ENST00000394536 TRAV5A0A0B4J249 113 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 IGHV1-18A0A0C4DH31 117 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 A0A1W2PRD5 423 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 A0A1W2PRF3 423 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 A0A1W2PRM7 423 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 COX7A1P24310 79 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 GPR6P46095 362 aaPredicted RBP13.34□□□□□ -0.27
PCDH1-203ENST00000394536 RPL8P62917 257 aaKnown RBP13.34□□□□□ -0.27
PCDH1-203ENST00000394536 VMA21Q3ZAQ7 101 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 ACSF3Q4G176 576 aaPredicted RBP13.34□□□□□ -0.27
PCDH1-203ENST00000394536 SAP30LQ9HAJ7 183 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 DNAJC4Q9NNZ3 241 aa13.34□□□□□ -0.27
PCDH1-203ENST00000394536 PRRG2O14669 202 aa13.33□□□□□ -0.27
PCDH1-203ENST00000394536 SP9P0CG40 484 aa13.33□□□□□ -0.27
PCDH1-203ENST00000394536 DMRTC2Q8IXT2 367 aaPredicted RBP13.33□□□□□ -0.27
PCDH1-203ENST00000394536 C11orf42Q8N5U0 333 aa13.33□□□□□ -0.27
PCDH1-203ENST00000394536 MDS2Q8NDY4 140 aa13.33□□□□□ -0.27
PCDH1-203ENST00000394536 MRPL37Q9BZE1 423 aaKnown RBP13.33□□□□□ -0.27
PCDH1-203ENST00000394536 IGKV1D-17A0A075B6S4 117 aa13.33□□□□□ -0.28
PCDH1-203ENST00000394536 TMEM265A0A087WTH1 108 aa13.33□□□□□ -0.28
PCDH1-203ENST00000394536 M0QZK8 103 aa13.33□□□□□ -0.28
PCDH1-203ENST00000394536 KLK10O43240 276 aa13.33□□□□□ -0.28
PCDH1-203ENST00000394536 PTTG1IPP53801 180 aa13.33□□□□□ -0.28
PCDH1-203ENST00000394536 LYZP61626 148 aa13.33□□□□□ -0.28
PCDH1-203ENST00000394536 FOXL1Q12952 345 aa13.33□□□□□ -0.28
PCDH1-203ENST00000394536 LRRC10Q5BKY1 277 aa13.33□□□□□ -0.28
PCDH1-203ENST00000394536 GCSAMQ8N6F7 178 aa13.33□□□□□ -0.28
PCDH1-203ENST00000394536 GP6Q9HCN6 339 aa13.33□□□□□ -0.28
PCDH1-203ENST00000394536 PGPA6NDG6 321 aa13.33□□□□□ -0.28
PCDH1-203ENST00000394536 YPEL1O60688 119 aa13.33□□□□□ -0.28
PCDH1-203ENST00000394536 SS18L1O75177 396 aaPredicted RBP13.33□□□□□ -0.28
PCDH1-203ENST00000394536 YPEL4Q96NS1 127 aa13.33□□□□□ -0.28
PCDH1-203ENST00000394536 YPEL2Q96QA6 119 aa13.33□□□□□ -0.28
PCDH1-203ENST00000394536 SERTM2A0A1B0GWG4 89 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 PYYP10082 97 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 CCL3L1P16619 93 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 RELBQ01201 579 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 TMEM108Q6UXF1 575 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 IDI2-AS1Q9NZ38 188 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCDH1-203ENST00000394536 KBTBD11-OT1A0A1B0GTJ5 212 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 C15orf61A6NNL5 157 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 WISP2O76076 250 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 MOSP00540 346 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 LINC00479Q96M42 142 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 NUPR1O60356 82 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 CD99P14209 185 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 SSBP4Q9BWG4 385 aaPredicted RBP13.32□□□□□ -0.28
PCDH1-203ENST00000394536 NRN1Q9NPD7 142 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 WDFY4Q6ZS81 3184 aa13.32□□□□□ -0.28
PCDH1-203ENST00000394536 FRYLO94915 3013 aa13.31□□□□□ -0.28
PCDH1-203ENST00000394536 CD59P13987 128 aa13.31□□□□□ -0.28
PCDH1-203ENST00000394536 C10orf55Q5SWW7 151 aa13.31□□□□□ -0.28
PCDH1-203ENST00000394536 WDR31Q8NA23 367 aa13.31□□□□□ -0.28
PCDH1-203ENST00000394536 OR1L4Q8NGR5 311 aa13.31□□□□□ -0.28
PCDH1-203ENST00000394536 SNHG12Q9BXW3 62 aa13.31□□□□□ -0.28
PCDH1-203ENST00000394536 SPG11Q96JI7 2443 aa13.31□□□□□ -0.28
PCDH1-203ENST00000394536 MT-ND6P03923 174 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms