RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 PRB3Q04118 309 aaPredicted RBP11□□□□□ -0.65
GTF2F1-201ENST00000394456 BSPH1Q075Z2 132 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 STUMQ69YW2 141 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 TMEM108Q6UXF1 575 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 OR52E5Q8NH55 327 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 PPP1R35Q8TAP8 253 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 ELOVL5Q9NYP7 299 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 TRAPPC1Q9Y5R8 145 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 CXorf1O96002 111 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 RNF224P0DH78 156 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 ADMP35318 185 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 TMPRSS3P57727 454 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 SSBP2P81877 361 aaPredicted RBP11□□□□□ -0.65
GTF2F1-201ENST00000394456 SSX2Q16385 188 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 COA6Q5JTJ3 125 aaKnown RBP11□□□□□ -0.65
GTF2F1-201ENST00000394456 MORN5Q5VZ52 161 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 TEPPQ6URK8 271 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 RNF7Q9UBF6 113 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 RAXQ9Y2V3 346 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 MSRB2Q9Y3D2 182 aa11□□□□□ -0.65
GTF2F1-201ENST00000394456 LRBAP50851 2863 aa10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 F2Z2F3 143 aa10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 TYMSP04818 313 aa10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 OR10J4P0C629 311 aa10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 DLX1P56177 255 aa10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 LHFPL4Q7Z7J7 247 aa10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 OR9G1Q8NH87 305 aa10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 TRGV10A0A0A0MS01 117 aa10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 NDUFB7P17568 137 aa10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 CNN1P51911 297 aaKnown RBP10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 PKIAP61925 76 aa10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 TEX38Q6PEX7 206 aa10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 DMRTC2Q8IXT2 367 aaPredicted RBP10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 ZNF503Q96F45 646 aa10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 ZNF835Q9Y2P0 537 aa10.99□□□□□ -0.65
GTF2F1-201ENST00000394456 MDFIC2A0A1B0GVS7 189 aa10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 FAM90A9PA6NNJ1 464 aa10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 J3QR06 171 aa10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 MPDU1O75352 247 aa10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 RPP30P78346 268 aaKnown RBP10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 C10orf55Q5SWW7 151 aa10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 KCNIP4Q6PIL6 250 aa10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 MRPL41Q8IXM3 137 aaKnown RBP10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 FOXA2Q9Y261 457 aaPredicted RBP10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 TRAV5A0A0B4J249 113 aa10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 DVL1O14640 695 aa10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 PDLIM4P50479 330 aa10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 SLC35B1P78383 322 aa10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 FAM222BQ8WU58 562 aa10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 TP53TG3Q9ULZ0 132 aa10.98□□□□□ -0.65
GTF2F1-201ENST00000394456 ABCA4P78363 2273 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 TRGV8A0A0C4DH27 118 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 GATCO43716 136 aaKnown RBP10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 CRYBB3P26998 211 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 PRR20EP86478 221 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 PRR20CP86479 221 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 PRR20DP86480 221 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 PRR20BP86481 221 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 PRR20AP86496 221 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 PSG5Q15238 335 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 MRPL20Q9BYC9 149 aaKnown RBP10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 IL19Q9UHD0 177 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 DCHS2Q6V1P9 2916 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 TEX50A0A1B0GTY4 177 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 SAA1P0DJI8 122 aaPredicted RBP10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 CHRNB4P30926 498 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 OR10J1P30954 320 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 GATA4P43694 442 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 LGALS4P56470 323 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 LINC00310P59036 64 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 FXYD3Q14802 87 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 ADIPOQQ15848 244 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 PRR31Q5SQ13 230 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 GBGT1Q8N5D6 347 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 OR10G8Q8NGN5 311 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 OR2T6Q8NHC8 308 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 ENY2Q9NPA8 101 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 SLC35D1Q9NTN3 355 aa10.97□□□□□ -0.65
GTF2F1-201ENST00000394456 ZNF788Q6ZQV5 615 aa10.96□□□□□ -0.65
GTF2F1-201ENST00000394456 NUP37Q8NFH4 326 aa10.96□□□□□ -0.65
GTF2F1-201ENST00000394456 OR5R1Q8NH85 324 aa10.96□□□□□ -0.65
GTF2F1-201ENST00000394456 RNASEH2CQ8TDP1 164 aaKnown RBP10.96□□□□□ -0.65
GTF2F1-201ENST00000394456 ACY3Q96HD9 319 aa10.96□□□□□ -0.65
GTF2F1-201ENST00000394456 NABP2Q9BQ15 211 aa10.96□□□□□ -0.65
GTF2F1-201ENST00000394456 RNASE7Q9H1E1 156 aaKnown RBP10.96□□□□□ -0.65
GTF2F1-201ENST00000394456 JKAMPQ9P055 326 aa10.96□□□□□ -0.65
GTF2F1-201ENST00000394456 TNFSF4P23510 183 aa10.96□□□□□ -0.66
GTF2F1-201ENST00000394456 RAB7AP51149 207 aa10.96□□□□□ -0.66
GTF2F1-201ENST00000394456 TMEM249Q2WGJ8 235 aa10.96□□□□□ -0.66
GTF2F1-201ENST00000394456 RUSC1-AS1Q66K80 236 aa10.96□□□□□ -0.66
GTF2F1-201ENST00000394456 C19orf35Q6ZS72 473 aa10.96□□□□□ -0.66
GTF2F1-201ENST00000394456 REC114Q7Z4M0 266 aa10.96□□□□□ -0.66
GTF2F1-201ENST00000394456 NHLRC2Q8NBF2 726 aa10.96□□□□□ -0.66
GTF2F1-201ENST00000394456 NEUROG1Q92886 237 aa10.96□□□□□ -0.66
GTF2F1-201ENST00000394456 SLC45A2Q9UMX9 530 aa10.96□□□□□ -0.66
GTF2F1-201ENST00000394456 ANKHD1Q8IWZ3 2542 aaKnown RBP10.96□□□□□ -0.66
GTF2F1-201ENST00000394456 ABCA1O95477 2261 aa10.96□□□□□ -0.66
GTF2F1-201ENST00000394456 SVEP1Q4LDE5 3571 aa10.96□□□□□ -0.66
GTF2F1-201ENST00000394456 TSTD3H0UI37 97 aa10.95□□□□□ -0.66
GTF2F1-201ENST00000394456 UPK2O00526 184 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms