RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 Q8IYB0 196 aa13.81□□□□□ -0.2
SIPA1-201ENST00000394224 OR2V2Q96R30 315 aa13.81□□□□□ -0.2
SIPA1-201ENST00000394224 MMP23AO75900 390 aa13.81□□□□□ -0.2
SIPA1-201ENST00000394224 MFAP2P55001 183 aa13.81□□□□□ -0.2
SIPA1-201ENST00000394224 TIGITQ495A1 244 aa13.81□□□□□ -0.2
SIPA1-201ENST00000394224 UNQ5815/PRO19632Q6UWF5 114 aa13.81□□□□□ -0.2
SIPA1-201ENST00000394224 C11orf53Q8IXP5 236 aa13.81□□□□□ -0.2
SIPA1-201ENST00000394224 ZNF439Q8NDP4 499 aa13.81□□□□□ -0.2
SIPA1-201ENST00000394224 SLC24A4Q8NFF2 622 aa13.81□□□□□ -0.2
SIPA1-201ENST00000394224 NRN1Q9NPD7 142 aa13.81□□□□□ -0.2
SIPA1-201ENST00000394224 KCNIP2Q9NS61 270 aa13.81□□□□□ -0.2
SIPA1-201ENST00000394224 ZNF586Q9NXT0 402 aa13.81□□□□□ -0.2
SIPA1-201ENST00000394224 LNP1A1A4G5 178 aa13.81□□□□□ -0.2
SIPA1-201ENST00000394224 LPAR2Q9HBW0 351 aa13.81□□□□□ -0.2
SIPA1-201ENST00000394224 ADAMTS20P59510 1910 aa13.8□□□□□ -0.2
SIPA1-201ENST00000394224 PCP4P48539 62 aa13.8□□□□□ -0.2
SIPA1-201ENST00000394224 CCL8P80075 99 aa13.8□□□□□ -0.2
SIPA1-201ENST00000394224 PEAR1Q5VY43 1037 aaPredicted RBP13.8□□□□□ -0.2
SIPA1-201ENST00000394224 DNAJC4Q9NNZ3 241 aa13.8□□□□□ -0.2
SIPA1-201ENST00000394224 ORM2P19652 201 aa13.8□□□□□ -0.2
SIPA1-201ENST00000394224 RPL8P62917 257 aaKnown RBP13.8□□□□□ -0.2
SIPA1-201ENST00000394224 LINC00596Q86U02 117 aa13.8□□□□□ -0.2
SIPA1-201ENST00000394224 EAF1Q96JC9 268 aaPredicted RBP13.8□□□□□ -0.2
SIPA1-201ENST00000394224 NPVFQ9HCQ7 196 aa13.8□□□□□ -0.2
SIPA1-201ENST00000394224 CLEC5AQ9NY25 188 aa13.8□□□□□ -0.2
SIPA1-201ENST00000394224 WIPI2Q9Y4P8 454 aa13.8□□□□□ -0.2
SIPA1-201ENST00000394224 FAM90A26D6RGX4 464 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 MORN2Q502X0 79 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 SLC35E4Q6ICL7 350 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 OR4A47Q6IF82 309 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 FAM216BQ8N7L0 139 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 NABP2Q9BQ15 211 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 TIMM9Q9Y5J7 89 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 J3QR06 171 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 HNRNPA3P51991 378 aaKnown RBP13.79□□□□□ -0.2
SIPA1-201ENST00000394224 RHOBP62745 196 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 RAB31Q13636 194 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 TPTE2P1Q5T6R2 138 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 RPRMLQ8N4K4 120 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 Q8N7P7 452 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 IGFBPL1Q8WX77 278 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 VENTXO95231 258 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 CHRNB4P30926 498 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 RAB7AP51149 207 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 ZNF138P52744 262 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 SSBP2P81877 361 aaPredicted RBP13.79□□□□□ -0.2
SIPA1-201ENST00000394224 KLF13Q9Y2Y9 288 aaPredicted RBP13.79□□□□□ -0.2
SIPA1-201ENST00000394224 MALRD1Q5VYJ5 2156 aa13.79□□□□□ -0.2
SIPA1-201ENST00000394224 IGKV1D-17A0A075B6S4 117 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 STAG3L2P0CL84 134 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 STAG3L3P0CL85 134 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 H1FXQ92522 213 aaKnown RBP13.78□□□□□ -0.2
SIPA1-201ENST00000394224 KMT2EQ8IZD2 1858 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 SAA2-SAA4A0A096LPE2 208 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 ENSAO43768 121 aaKnown RBP13.78□□□□□ -0.2
SIPA1-201ENST00000394224 SAA2P0DJI9 122 aaPredicted RBP13.78□□□□□ -0.2
SIPA1-201ENST00000394224 USF1P22415 310 aaPredicted RBP13.78□□□□□ -0.2
SIPA1-201ENST00000394224 MRPS11P82912 194 aaKnown RBP13.78□□□□□ -0.2
SIPA1-201ENST00000394224 STPG4Q8N801 248 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 ITLN1Q8WWA0 313 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 BORCS7Q96B45 105 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 TMPRSS2O15393 492 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 DLEU1O43261 78 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 LCN2P80188 198 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 MSMPQ1L6U9 139 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 ZNF718Q3SXZ3 478 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 IBA57Q5T440 356 aaKnown RBP13.78□□□□□ -0.2
SIPA1-201ENST00000394224 ETFRF1Q6IPR1 90 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 HCP5Q6MZN7 132 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 C9orf106Q8NAJ2 232 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 IL36BQ9NZH7 164 aa13.78□□□□□ -0.2
SIPA1-201ENST00000394224 TRBV6-6A0A0A6YYG2 114 aa13.77□□□□□ -0.2
SIPA1-201ENST00000394224 MUC21A0A0G2JKD1 596 aa13.77□□□□□ -0.2
SIPA1-201ENST00000394224 MUC21A0A140T8X8 626 aa13.77□□□□□ -0.2
SIPA1-201ENST00000394224 CORTO00230 105 aa13.77□□□□□ -0.2
SIPA1-201ENST00000394224 HSBP1O75506 76 aa13.77□□□□□ -0.2
SIPA1-201ENST00000394224 UBE2L3P68036 154 aaKnown RBP13.77□□□□□ -0.2
SIPA1-201ENST00000394224 SRSF7Q16629 238 aaKnown RBP eCLIP13.77□□□□□ -0.2
SIPA1-201ENST00000394224 MUC21Q5SSG8 566 aa13.77□□□□□ -0.2
SIPA1-201ENST00000394224 CXXC4Q9H2H0 198 aa13.77□□□□□ -0.2
SIPA1-201ENST00000394224 SLC35D1Q9NTN3 355 aa13.77□□□□□ -0.2
SIPA1-201ENST00000394224 OR51B2Q9Y5P1 312 aa13.77□□□□□ -0.2
SIPA1-201ENST00000394224 C1orf210Q8IVY1 113 aa13.77□□□□□ -0.21
SIPA1-201ENST00000394224 CDX2Q99626 313 aaPredicted RBP13.77□□□□□ -0.21
SIPA1-201ENST00000394224 GSX1Q9H4S2 264 aaPredicted RBP13.77□□□□□ -0.21
SIPA1-201ENST00000394224 PCSK5Q92824 1860 aa13.77□□□□□ -0.21
SIPA1-201ENST00000394224 BRS3P32247 399 aa13.77□□□□□ -0.21
SIPA1-201ENST00000394224 ACSF3Q4G176 576 aaPredicted RBP13.77□□□□□ -0.21
SIPA1-201ENST00000394224 BEND2Q8NDZ0 799 aa13.77□□□□□ -0.21
SIPA1-201ENST00000394224 GP6Q9HCN6 339 aa13.77□□□□□ -0.21
SIPA1-201ENST00000394224 ARL2-SNX15V9GYD0 113 aa13.77□□□□□ -0.21
SIPA1-201ENST00000394224 RAB4AP20338 218 aa13.76□□□□□ -0.21
SIPA1-201ENST00000394224 MIEN1Q9BRT3 115 aa13.76□□□□□ -0.21
SIPA1-201ENST00000394224 IGKV1OR2-108A0A075B7D4 117 aa13.76□□□□□ -0.21
SIPA1-201ENST00000394224 MOSP00540 346 aa13.76□□□□□ -0.21
SIPA1-201ENST00000394224 PTTG1IPP53801 180 aa13.76□□□□□ -0.21
SIPA1-201ENST00000394224 COA6Q5JTJ3 125 aaKnown RBP13.76□□□□□ -0.21
SIPA1-201ENST00000394224 TMEM144Q7Z5S9 345 aa13.76□□□□□ -0.21
SIPA1-201ENST00000394224 ZNF331Q9NQX6 463 aaPredicted RBP13.76□□□□□ -0.21
SIPA1-201ENST00000394224 SPG11Q96JI7 2443 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms