RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 FOXE3Q13461 319 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 C12orf54Q6X4T0 127 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 LHFPL4Q7Z7J7 247 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 FAM216AQ8WUB2 273 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 LINC00479Q96M42 142 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 HSD17B10Q99714 261 aaKnown RBP12.34□□□□□ -0.43
CTNS-202ENST00000381870 MCRIP2Q9BUT9 160 aaKnown RBP12.34□□□□□ -0.43
CTNS-202ENST00000381870 FAM234AQ9H0X4 552 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 ZNF430Q9H8G1 570 aaPredicted RBP12.34□□□□□ -0.43
CTNS-202ENST00000381870 IGHV1-45A0A0A0MS14 117 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 ARR3P36575 388 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 CAMPP49913 170 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 PPOXP50336 477 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 MRPL14Q6P1L8 145 aaKnown RBP12.34□□□□□ -0.43
CTNS-202ENST00000381870 NUP35Q8NFH5 326 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 RFESDQ8TAC1 157 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 WIPF2Q8TF74 440 aaPredicted RBP12.34□□□□□ -0.43
CTNS-202ENST00000381870 PLPPR2Q96GM1 343 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 COMMD5Q9GZQ3 224 aa12.34□□□□□ -0.43
CTNS-202ENST00000381870 TMEM30CPA0ZSE6 113 aa12.33□□□□□ -0.44
CTNS-202ENST00000381870 FOXF2Q12947 444 aa12.33□□□□□ -0.44
CTNS-202ENST00000381870 TPRX1Q8N7U7 411 aa12.33□□□□□ -0.44
CTNS-202ENST00000381870 TET2Q6N021 2002 aaPredicted RBP12.33□□□□□ -0.44
CTNS-202ENST00000381870 C2CD4DB7Z1M9 353 aa12.33□□□□□ -0.44
CTNS-202ENST00000381870 C21orf140B9A014 251 aa12.33□□□□□ -0.44
CTNS-202ENST00000381870 SYS1-DBNDD2H3BUS1 97 aa12.33□□□□□ -0.44
CTNS-202ENST00000381870 P04436 131 aa12.33□□□□□ -0.44
CTNS-202ENST00000381870 ZNF146Q15072 292 aa12.33□□□□□ -0.44
CTNS-202ENST00000381870 NRN1LQ496H8 165 aa12.33□□□□□ -0.44
CTNS-202ENST00000381870 TSTD1Q8NFU3 115 aa12.33□□□□□ -0.44
CTNS-202ENST00000381870 SCRT2Q9NQ03 307 aa12.33□□□□□ -0.44
CTNS-202ENST00000381870 J3QR06 171 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 CRXO43186 299 aaPredicted RBP12.32□□□□□ -0.44
CTNS-202ENST00000381870 OR7C2O60412 319 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 HAND1O96004 215 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 CD24P25063 80 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 LTC4SQ16873 150 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 RPS19BP1Q86WX3 136 aaKnown RBP12.32□□□□□ -0.44
CTNS-202ENST00000381870 WDR31Q8NA23 367 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 FER1L6-AS1Q8NA97 138 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 IMMP1LQ96LU5 166 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 TMEM167BQ9NRX6 74 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 PEF1Q9UBV8 284 aaKnown RBP12.32□□□□□ -0.44
CTNS-202ENST00000381870 ZNF835Q9Y2P0 537 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 HCFC1P51610 2035 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 MT-CO3P00414 261 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 COX6A1P12074 109 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 PRR20EP86478 221 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 PRR20CP86479 221 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 PRR20DP86480 221 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 PRR20BP86481 221 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 PRR20AP86496 221 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 SLC35E4Q6ICL7 350 aa12.32□□□□□ -0.44
CTNS-202ENST00000381870 OOEPA6NGQ2 149 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 PROP1O75360 226 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 GABRA6Q16445 453 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 Q6ZR03 302 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 OR1B1Q8NGR6 318 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 TRIB1Q96RU8 372 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 PLEKHA3Q9HB20 300 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 DOCK7Q96N67 2140 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 IGHV1-24A0A0C4DH33 117 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 C7orf71A4D174 169 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 FOXA3P55318 350 aaPredicted RBP12.31□□□□□ -0.44
CTNS-202ENST00000381870 SRYQ05066 204 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 OR1C1Q15619 314 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 TUSC5Q8IXB3 177 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 SLC25A40Q8TBP6 338 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 MBD6Q96DN6 1003 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 RTL8AQ9BWD3 113 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 WDR54Q9H977 334 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 SLC25A10Q9UBX3 287 aaPredicted RBP12.31□□□□□ -0.44
CTNS-202ENST00000381870 CELSR3Q9NYQ7 3312 aa12.31□□□□□ -0.44
CTNS-202ENST00000381870 TMEM265A0A087WTH1 108 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 GAGE10A6NGK3 116 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 VWC2LB2RUY7 222 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 H0Y8G0 127 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 WNT9BO14905 357 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 OR2J3O76001 311 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 SMIM21Q3B7S5 101 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 RASL11AQ6T310 242 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 SNRNP40Q96DI7 357 aaKnown RBP12.3□□□□□ -0.44
CTNS-202ENST00000381870 COQ2Q96H96 371 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 NABP2Q9BQ15 211 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 CHRDL1Q9BU40 450 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 FNDC4Q9H6D8 234 aaPredicted RBP12.3□□□□□ -0.44
CTNS-202ENST00000381870 LOC102723996A0A087X1L8 192 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 FAM231BA6NCW3 169 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 G3V4G9 280 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 SNAI2O43623 268 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 GRPP07492 148 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 SP1P08047 785 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 DUTP33316 252 aaKnown RBP12.3□□□□□ -0.44
CTNS-202ENST00000381870 PAX2Q02962 417 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 RAB31Q13636 194 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 Q8IYB0 196 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 PMCHL2Q9BQD1 86 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 TCF19Q9Y242 345 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 POLDIP2Q9Y2S7 368 aa12.3□□□□□ -0.44
CTNS-202ENST00000381870 PPIAL4DF5H284 164 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms