RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 TRAV8-4A0A0B4J246 113 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 CEACAM8P31997 349 aaPredicted RBP10.49□□□□□ -0.73
CHD3-203ENST00000380358 NAPSAO96009 420 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 COX6A1P12074 109 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 ZNF146Q15072 292 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 BHLHA9Q7RTU4 235 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 MYOFQ9NZM1 2061 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 C4AP0C0L4 1744 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 LCNL1Q6ZST4 164 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 ZNF329Q86UD4 541 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 COQ2Q96H96 371 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 PRADC1Q9BSG0 188 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 ZNF257Q9Y2Q1 563 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 SIRT4Q9Y6E7 314 aaPredicted RBP10.49□□□□□ -0.73
CHD3-203ENST00000380358 ZDBF2Q9HCK1 2354 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 DOCK9Q9BZ29 2069 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 TMEM86BQ8N661 226 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 ASCL2Q99929 193 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 IMMP1LQ96LU5 166 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 LINC00477Q96M19 166 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 DDA1Q9BW61 102 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 ANKRD31Q8N7Z5 1873 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 LRRC37A3O60309 1634 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 EPOPA6NHQ4 379 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 CXCL2P19875 107 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 LAMA4Q16363 1823 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 ZNF729A6NN14 1252 aaPredicted RBP10.48□□□□□ -0.73
CHD3-203ENST00000380358 UMODP07911 640 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 CCL1P22362 96 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 C8orf82Q6P1X6 216 aaPredicted RBP10.48□□□□□ -0.73
CHD3-203ENST00000380358 DPRXA6NFQ7 191 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 RCHY1Q96PM5 261 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 A0A0G2JMM0 328 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 A0A1W2PPB8 328 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 A0A1W2PRS3 328 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 TMEM8BA6NDV4 472 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 KIR3DP1A8MWS1 328 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 RHOGP84095 191 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 MIR17HGQ75NE6 70 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 C9orf62Q8N4C0 152 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 TMEM54Q969K7 222 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 A0A096LPF7 62 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 PRTN3P24158 256 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 GTF3AQ92664 365 aaKnown RBP10.48□□□□□ -0.73
CHD3-203ENST00000380358 COX11Q9Y6N1 276 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 V9GYH0 126 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 C19orf67A6NJJ6 358 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 H3BUT2 72 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 CECR9P0C854 216 aa10.48□□□□□ -0.73
CHD3-203ENST00000380358 RNASE7Q9H1E1 156 aaKnown RBP10.47□□□□□ -0.73
CHD3-203ENST00000380358 JPT1Q9UK76 154 aa10.47□□□□□ -0.73
CHD3-203ENST00000380358 ZP1P60852 638 aa10.47□□□□□ -0.73
CHD3-203ENST00000380358 KLHL30-AS1Q8NEE0 82 aa10.47□□□□□ -0.73
CHD3-203ENST00000380358 A0A1W2PPC1 479 aa10.47□□□□□ -0.73
CHD3-203ENST00000380358 GNLYP22749 145 aa10.47□□□□□ -0.73
CHD3-203ENST00000380358 NAA38Q9BRA0 125 aaKnown RBP10.47□□□□□ -0.73
CHD3-203ENST00000380358 CYSLTR1Q9Y271 337 aa10.47□□□□□ -0.73
CHD3-203ENST00000380358 ZNF831Q5JPB2 1677 aa10.47□□□□□ -0.73
CHD3-203ENST00000380358 RND3P61587 244 aa10.47□□□□□ -0.73
CHD3-203ENST00000380358 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.47□□□□□ -0.73
CHD3-203ENST00000380358 TCF23Q7RTU1 214 aa10.47□□□□□ -0.73
CHD3-203ENST00000380358 OR52E5Q8NH55 327 aa10.47□□□□□ -0.73
CHD3-203ENST00000380358 RPL15P61313 204 aaKnown RBP10.47□□□□□ -0.73
CHD3-203ENST00000380358 NPCDR1Q9BY65 106 aa10.47□□□□□ -0.73
CHD3-203ENST00000380358 ELOVL5Q9NYP7 299 aa10.47□□□□□ -0.73
CHD3-203ENST00000380358 NPIPB13A6NJU9 1138 aa10.46□□□□□ -0.73
CHD3-203ENST00000380358 NPIPB5A8MRT5 1133 aa10.46□□□□□ -0.73
CHD3-203ENST00000380358 HOXD3P31249 432 aaPredicted RBP10.46□□□□□ -0.73
CHD3-203ENST00000380358 ATP5G3P48201 142 aa10.46□□□□□ -0.73
CHD3-203ENST00000380358 ZIC4Q8N9L1 334 aa10.46□□□□□ -0.73
CHD3-203ENST00000380358 ZNF646O15015 1829 aaPredicted RBP10.46□□□□□ -0.73
CHD3-203ENST00000380358 IFNL4K9M1U5 179 aa10.46□□□□□ -0.73
CHD3-203ENST00000380358 MT-ND6P03923 174 aa10.46□□□□□ -0.73
CHD3-203ENST00000380358 ORAOV1Q8WV07 137 aa10.46□□□□□ -0.73
CHD3-203ENST00000380358 LHFPL6Q9Y693 200 aa10.46□□□□□ -0.73
CHD3-203ENST00000380358 NCOR1O75376 2440 aa10.46□□□□□ -0.73
CHD3-203ENST00000380358 ESDP10768 282 aa10.46□□□□□ -0.73
CHD3-203ENST00000380358 SCAND1P57086 179 aa10.46□□□□□ -0.74
CHD3-203ENST00000380358 TBR1Q16650 682 aa10.46□□□□□ -0.74
CHD3-203ENST00000380358 SAP25Q8TEE9 199 aa10.46□□□□□ -0.74
CHD3-203ENST00000380358 TRAV13-1A0A0B4J241 112 aa10.46□□□□□ -0.74
CHD3-203ENST00000380358 CTDSPLO15194 276 aa10.46□□□□□ -0.74
CHD3-203ENST00000380358 NEU4Q8WWR8 484 aaPredicted RBP10.46□□□□□ -0.74
CHD3-203ENST00000380358 TMEM126AQ9H061 195 aa10.46□□□□□ -0.74
CHD3-203ENST00000380358 C17orf98A8MV24 154 aa10.46□□□□□ -0.74
CHD3-203ENST00000380358 IGFL4Q6B9Z1 124 aa10.46□□□□□ -0.74
CHD3-203ENST00000380358 TMEM91Q6ZNR0 172 aa10.46□□□□□ -0.74
CHD3-203ENST00000380358 IGKV2-40A0A087WW87 121 aaPredicted RBP10.45□□□□□ -0.74
CHD3-203ENST00000380358 TRAV25A0A0B4J276 109 aa10.45□□□□□ -0.74
CHD3-203ENST00000380358 IGKV2D-40P01614 121 aaPredicted RBP10.45□□□□□ -0.74
CHD3-203ENST00000380358 ACP7Q6ZNF0 438 aa10.45□□□□□ -0.74
CHD3-203ENST00000380358 SCRT1Q9BWW7 348 aa10.45□□□□□ -0.74
CHD3-203ENST00000380358 ALPK2Q86TB3 2170 aa10.45□□□□□ -0.74
CHD3-203ENST00000380358 CHTOPQ9Y3Y2 248 aaKnown RBP10.45□□□□□ -0.74
CHD3-203ENST00000380358 POLR2AP24928 1970 aaKnown RBP10.45□□□□□ -0.74
CHD3-203ENST00000380358 CLPPQ16740 277 aaPredicted RBP10.45□□□□□ -0.74
CHD3-203ENST00000380358 MDS2Q8NDY4 140 aa10.45□□□□□ -0.74
CHD3-203ENST00000380358 M0R2P5 195 aa10.45□□□□□ -0.74
CHD3-203ENST00000380358 DMRTC2Q8IXT2 367 aaPredicted RBP10.45□□□□□ -0.74
CHD3-203ENST00000380358 KIAA1217Q5T5P2 1943 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms