RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 SCAND1P57086 179 aa17.04■□□□□ 0.32
U2AF1-202ENST00000380276 RNF2Q99496 336 aa17.04■□□□□ 0.32
U2AF1-202ENST00000380276 CSTL1Q9H114 145 aa17.04■□□□□ 0.32
U2AF1-202ENST00000380276 NDUFA4L2Q9NRX3 87 aa17.04■□□□□ 0.32
U2AF1-202ENST00000380276 RAB26Q9ULW5 256 aa17.04■□□□□ 0.32
U2AF1-202ENST00000380276 A0A0A6YYH2 397 aa17.03■□□□□ 0.32
U2AF1-202ENST00000380276 A6NJ64 397 aa17.03■□□□□ 0.32
U2AF1-202ENST00000380276 C15orf62A8K5M9 175 aa17.03■□□□□ 0.32
U2AF1-202ENST00000380276 MPTX1A8MV57 137 aa17.03■□□□□ 0.32
U2AF1-202ENST00000380276 F2RP25116 425 aa17.03■□□□□ 0.32
U2AF1-202ENST00000380276 ADMP35318 185 aa17.03■□□□□ 0.32
U2AF1-202ENST00000380276 MISP3Q96FF7 219 aa17.03■□□□□ 0.32
U2AF1-202ENST00000380276 TMEM56Q96MV1 263 aa17.03■□□□□ 0.32
U2AF1-202ENST00000380276 CMTM3Q96MX0 182 aa17.03■□□□□ 0.32
U2AF1-202ENST00000380276 RARRES2Q99969 163 aa17.03■□□□□ 0.32
U2AF1-202ENST00000380276 ZNF2Q9BSG1 426 aaPredicted RBP17.03■□□□□ 0.32
U2AF1-202ENST00000380276 RHPN1-AS1Q9BWJ2 59 aa17.03■□□□□ 0.32
U2AF1-202ENST00000380276 SMPXQ9UHP9 88 aa17.03■□□□□ 0.32
U2AF1-202ENST00000380276 FRAS1Q86XX4 4008 aa17.02■□□□□ 0.32
U2AF1-202ENST00000380276 F8W735 103 aaPredicted RBP17.02■□□□□ 0.32
U2AF1-202ENST00000380276 K7EIM0 57 aa17.02■□□□□ 0.32
U2AF1-202ENST00000380276 NUPL2O15504 423 aaKnown RBP17.02■□□□□ 0.32
U2AF1-202ENST00000380276 PGLYRP1O75594 196 aaPredicted RBP17.02■□□□□ 0.32
U2AF1-202ENST00000380276 NANOS2P60321 138 aaKnown RBP17.02■□□□□ 0.32
U2AF1-202ENST00000380276 RELQ04864 619 aaPredicted RBP17.02■□□□□ 0.32
U2AF1-202ENST00000380276 LGALS9CQ6DKI2 356 aa17.02■□□□□ 0.32
U2AF1-202ENST00000380276 GBGT1Q8N5D6 347 aa17.02■□□□□ 0.32
U2AF1-202ENST00000380276 TMEM116Q8NCL8 245 aa17.02■□□□□ 0.32
U2AF1-202ENST00000380276 FCAMRQ8WWV6 532 aa17.02■□□□□ 0.32
U2AF1-202ENST00000380276 ATP6V0BQ99437 205 aa17.02■□□□□ 0.32
U2AF1-202ENST00000380276 IGHV7-4-1A0A0J9YVY3 117 aa17.01■□□□□ 0.31
U2AF1-202ENST00000380276 CHEK1O14757 476 aa17.01■□□□□ 0.31
U2AF1-202ENST00000380276 PMP2P02689 132 aa17.01■□□□□ 0.31
U2AF1-202ENST00000380276 IFNA4P05014 189 aa17.01■□□□□ 0.31
U2AF1-202ENST00000380276 RBMS2Q15434 407 aaKnown RBP17.01■□□□□ 0.31
U2AF1-202ENST00000380276 LCE2DQ5TA82 110 aaPredicted RBP17.01■□□□□ 0.31
U2AF1-202ENST00000380276 C11orf45Q8TAV5 145 aa17.01■□□□□ 0.31
U2AF1-202ENST00000380276 SLC25A46Q96AG3 418 aa17.01■□□□□ 0.31
U2AF1-202ENST00000380276 PRNDQ9UKY0 176 aa17.01■□□□□ 0.31
U2AF1-202ENST00000380276 IGHV3OR16-13A0A075B7E8 117 aa17■□□□□ 0.31
U2AF1-202ENST00000380276 IGHV3-74A0A0B4J1X5 117 aa17■□□□□ 0.31
U2AF1-202ENST00000380276 RFX2P48378 723 aa17■□□□□ 0.31
U2AF1-202ENST00000380276 CMC4P56277 68 aaPredicted RBP17■□□□□ 0.31
U2AF1-202ENST00000380276 CMTM1Q8IZ96 169 aa17■□□□□ 0.31
U2AF1-202ENST00000380276 GATAD1Q8WUU5 269 aa17■□□□□ 0.31
U2AF1-202ENST00000380276 DGCR14Q96DF8 476 aaKnown RBP17■□□□□ 0.31
U2AF1-202ENST00000380276 MFFQ9GZY8 342 aa17■□□□□ 0.31
U2AF1-202ENST00000380276 EIF4EP06730 217 aaKnown RBP16.99■□□□□ 0.31
U2AF1-202ENST00000380276 OR5H2Q8NGV7 314 aa16.99■□□□□ 0.31
U2AF1-202ENST00000380276 OR11H2Q8NH07 326 aa16.99■□□□□ 0.31
U2AF1-202ENST00000380276 MOB3AQ96BX8 217 aa16.99■□□□□ 0.31
U2AF1-202ENST00000380276 FKBP11Q9NYL4 201 aa16.99■□□□□ 0.31
U2AF1-202ENST00000380276 KMT2AQ03164 3969 aa16.99■□□□□ 0.31
U2AF1-202ENST00000380276 IGHV3-48P01763 117 aa16.98■□□□□ 0.31
U2AF1-202ENST00000380276 CTSGP08311 255 aa16.98■□□□□ 0.31
U2AF1-202ENST00000380276 MFAP4P55083 255 aa16.98■□□□□ 0.31
U2AF1-202ENST00000380276 PINX1Q96BK5 328 aaKnown RBP16.98■□□□□ 0.31
U2AF1-202ENST00000380276 TRAV14DV4A0A0A6YYC5 116 aa16.97■□□□□ 0.31
U2AF1-202ENST00000380276 DEFB4AO15263 64 aa16.97■□□□□ 0.31
U2AF1-202ENST00000380276 CA1P00915 261 aaPredicted RBP16.97■□□□□ 0.31
U2AF1-202ENST00000380276 PAFAH1B2P68402 229 aa16.97■□□□□ 0.31
U2AF1-202ENST00000380276 OR1P1Q8NH06 330 aa16.97■□□□□ 0.31
U2AF1-202ENST00000380276 TSC22D3Q99576 134 aa16.97■□□□□ 0.31
U2AF1-202ENST00000380276 FXYD6Q9H0Q3 95 aa16.97■□□□□ 0.31
U2AF1-202ENST00000380276 DBX1A6NMT0 343 aa16.96■□□□□ 0.31
U2AF1-202ENST00000380276 GPR31O00270 319 aa16.96■□□□□ 0.31
U2AF1-202ENST00000380276 GNG7O60262 68 aa16.96■□□□□ 0.31
U2AF1-202ENST00000380276 PHLDA2Q53GA4 152 aa16.96■□□□□ 0.31
U2AF1-202ENST00000380276 DHRS11Q6UWP2 260 aa16.96■□□□□ 0.31
U2AF1-202ENST00000380276 TCF24Q7RTU0 167 aa16.96■□□□□ 0.31
U2AF1-202ENST00000380276 S100A16Q96FQ6 103 aaKnown RBP16.96■□□□□ 0.31
U2AF1-202ENST00000380276 C15orf61A6NNL5 157 aa16.95■□□□□ 0.3
U2AF1-202ENST00000380276 DNASE2O00115 360 aaPredicted RBP16.95■□□□□ 0.3
U2AF1-202ENST00000380276 XRCC3O43542 346 aa16.95■□□□□ 0.3
U2AF1-202ENST00000380276 MT-CO2P00403 227 aa16.95■□□□□ 0.3
U2AF1-202ENST00000380276 TAS2R46P59540 309 aa16.95■□□□□ 0.3
U2AF1-202ENST00000380276 OR6F1Q8NGZ6 308 aa16.95■□□□□ 0.3
U2AF1-202ENST00000380276 OR4A16Q8NH70 328 aa16.95■□□□□ 0.3
U2AF1-202ENST00000380276 C2CD4CQ8TF44 421 aa16.95■□□□□ 0.3
U2AF1-202ENST00000380276 C11orf68Q9H3H3 251 aaKnown RBP16.95■□□□□ 0.3
U2AF1-202ENST00000380276 Q9H521 79 aa16.95■□□□□ 0.3
U2AF1-202ENST00000380276 ST8SIA3O43173 380 aa16.94■□□□□ 0.3
U2AF1-202ENST00000380276 S100GP29377 79 aa16.94■□□□□ 0.3
U2AF1-202ENST00000380276 RPL11P62913 178 aaKnown RBP16.94■□□□□ 0.3
U2AF1-202ENST00000380276 NEDD8Q15843 81 aa16.94■□□□□ 0.3
U2AF1-202ENST00000380276 TMEM69Q5SWH9 247 aa16.94■□□□□ 0.3
U2AF1-202ENST00000380276 OR10C1Q96KK4 312 aa16.94■□□□□ 0.3
U2AF1-202ENST00000380276 GINS3Q9BRX5 216 aa16.94■□□□□ 0.3
U2AF1-202ENST00000380276 NXF2Q9GZY0 626 aaKnown RBP16.94■□□□□ 0.3
U2AF1-202ENST00000380276 TMEM14BQ9NUH8 114 aa16.94■□□□□ 0.3
U2AF1-202ENST00000380276 IGHV3-66A0A0C4DH42 116 aa16.93■□□□□ 0.3
U2AF1-202ENST00000380276 I3L2K1 104 aa16.93■□□□□ 0.3
U2AF1-202ENST00000380276 TAS2R20P59543 309 aa16.93■□□□□ 0.3
U2AF1-202ENST00000380276 TMEM187Q14656 261 aa16.93■□□□□ 0.3
U2AF1-202ENST00000380276 LEMD1Q68G75 181 aa16.93■□□□□ 0.3
U2AF1-202ENST00000380276 H2BFWTQ7Z2G1 175 aa16.93■□□□□ 0.3
U2AF1-202ENST00000380276 ZNF414Q96IQ9 312 aa16.93■□□□□ 0.3
U2AF1-202ENST00000380276 TXN2Q99757 166 aa16.93■□□□□ 0.3
U2AF1-202ENST00000380276 DEFB131AP59861 70 aa16.92■□□□□ 0.3
U2AF1-202ENST00000380276 UBE2NLQ5JXB2 153 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms