RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 TM4SF5O14894 197 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 CA1P00915 261 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 IGKV3-15P01624 115 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 SRIP30626 198 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 PRR20EP86478 221 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 PRR20CP86479 221 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 PRR20DP86480 221 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 PRR20BP86481 221 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 PRR20AP86496 221 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 MMDQ15546 238 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 SPATA45Q537H7 98 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 TMEM136Q6ZRR5 245 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 TRGV8A0A0C4DH27 118 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 A0A1W2PS18 150 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 HSPE1P61604 102 aaKnown RBP13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 SUMO1P63165 101 aaKnown RBP13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 CX3CL1P78423 397 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 MLANAQ16655 118 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 FAM201AQ5SY85 155 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 IL19Q9UHD0 177 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 LY96Q9Y6Y9 160 aa13.12□□□□□ -0.31
ARHGEF1-204ENST00000378152 SAA2-SAA4A0A096LPE2 208 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 SAA2P0DJI9 122 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 ZNF83P51522 516 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 TIGITQ495A1 244 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 DDB2Q92466 427 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 PLEKHA3Q9HB20 300 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 CALYQ9NYX4 217 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 MGST3O14880 152 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 AREGP15514 252 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 CT45A1Q5HYN5 189 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 CT45A3Q8NHU0 189 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 ZNF503Q96F45 646 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 WNT10AQ9GZT5 417 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 TMEM11P17152 192 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 NTF3P20783 257 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 ATOH7Q8N100 152 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 LYG1Q8N1E2 194 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 IDI2-AS1Q9NZ38 188 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 OR51B2Q9Y5P1 312 aa13.11□□□□□ -0.31
ARHGEF1-204ENST00000378152 IGKV1OR2-108A0A075B7D4 117 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 TRBV9A0A0B4J1U6 114 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 GGTLC3B5MD39 225 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 TCF21O43680 179 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 OR4B1Q8NGF8 309 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 STARD4Q96DR4 205 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 KCNS1Q96KK3 526 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 RNF2Q99496 336 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 CLCF1Q9UBD9 225 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 SLC45A2Q9UMX9 530 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 TRAV34A0A0B4J273 112 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 WDR73Q6P4I2 378 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 MRPL52Q86TS9 123 aaKnown RBP13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 GCSAMQ8N6F7 178 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 NEUROG1Q92886 237 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 SSBP3Q9BWW4 388 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 TMEM14BQ9NUH8 114 aa13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 FOXA2Q9Y261 457 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF1-204ENST00000378152 ASPMQ8IZT6 3477 aa13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 BMPR1BO00238 502 aa13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 RAB7AP51149 207 aa13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 GAGE1Q13065 139 aa13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 MOGAT3Q86VF5 341 aa13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 C1orf174Q8IYL3 243 aa13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 TMEM167BQ9NRX6 74 aa13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 TNCP24821 2201 aa13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 IGHV2OR16-5A0A0B4J2B6 119 aa13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 SRRM5B3KS81 715 aa13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 KIR2DL2P43627 348 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 KIR2DS2P43631 304 aa13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 MSMPQ1L6U9 139 aa13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 IBA57Q5T440 356 aaKnown RBP13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 DUX4L9Q6RFH8 374 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 LINC00479Q96M42 142 aa13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 TECRQ9NZ01 308 aaKnown RBP13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 CDC42EP3Q9UKI2 254 aa13.09□□□□□ -0.31
ARHGEF1-204ENST00000378152 J3QR06 171 aa13.08□□□□□ -0.31
ARHGEF1-204ENST00000378152 F2RL2O00254 374 aa13.08□□□□□ -0.31
ARHGEF1-204ENST00000378152 COL5A1-AS1Q5SY13 56 aa13.08□□□□□ -0.31
ARHGEF1-204ENST00000378152 C11orf42Q8N5U0 333 aa13.08□□□□□ -0.31
ARHGEF1-204ENST00000378152 C9orf106Q8NAJ2 232 aa13.08□□□□□ -0.31
ARHGEF1-204ENST00000378152 PPP1R35Q8TAP8 253 aa13.08□□□□□ -0.31
ARHGEF1-204ENST00000378152 FAM168AQ92567 244 aa13.08□□□□□ -0.31
ARHGEF1-204ENST00000378152 TXN2Q99757 166 aa13.08□□□□□ -0.31
ARHGEF1-204ENST00000378152 IGHV1-18A0A0C4DH31 117 aa13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 C3orf79P0CE67 100 aa13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 OR9G1Q8NH87 305 aa13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 OSTCQ9NRP0 149 aa13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 ZNRD1Q9P1U0 126 aa13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 ZNF324O75467 553 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 MT-ND6P03923 174 aa13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 AMY1AP04745 511 aa13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 CHRNB4P30926 498 aa13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 CTRLP40313 264 aa13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 MRPS11P82912 194 aaKnown RBP13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 RPL19P84098 196 aaKnown RBP13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 RNF151Q2KHN1 245 aa13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 OR10J3Q5JRS4 329 aa13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 PRR31Q5SQ13 230 aa13.08□□□□□ -0.32
ARHGEF1-204ENST00000378152 Q6ZN92 141 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms