RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 ZNF474Q6S9Z5 364 aaPredicted RBP16.37■□□□□ 0.21
PCDH8-202ENST00000377942 RPL13AP40429 203 aaKnown RBP16.37■□□□□ 0.21
PCDH8-202ENST00000377942 SPTBN1Q01082 2364 aaKnown RBP16.37■□□□□ 0.21
PCDH8-202ENST00000377942 RELBQ01201 579 aa16.37■□□□□ 0.21
PCDH8-202ENST00000377942 MDC1Q14676 2089 aaKnown RBP16.36■□□□□ 0.21
PCDH8-202ENST00000377942 H3BTX0 84 aa16.36■□□□□ 0.21
PCDH8-202ENST00000377942 NUTF2P61970 127 aaKnown RBP16.36■□□□□ 0.21
PCDH8-202ENST00000377942 ID3Q02535 119 aa16.36■□□□□ 0.21
PCDH8-202ENST00000377942 ICAM4Q14773 271 aa16.36■□□□□ 0.21
PCDH8-202ENST00000377942 LYRM7Q5U5X0 104 aa16.36■□□□□ 0.21
PCDH8-202ENST00000377942 FAM166AQ6J272 317 aa16.36■□□□□ 0.21
PCDH8-202ENST00000377942 DTX1Q86Y01 620 aa16.36■□□□□ 0.21
PCDH8-202ENST00000377942 IGKV3-15P01624 115 aa16.36■□□□□ 0.21
PCDH8-202ENST00000377942 IFITM2Q01629 132 aa16.36■□□□□ 0.21
PCDH8-202ENST00000377942 RPL29P47914 159 aaKnown RBP16.36■□□□□ 0.21
PCDH8-202ENST00000377942 HIST1H1AQ02539 215 aaPredicted RBP16.36■□□□□ 0.21
PCDH8-202ENST00000377942 TFF3Q07654 80 aa16.36■□□□□ 0.21
PCDH8-202ENST00000377942 OR52E5Q8NH55 327 aa16.36■□□□□ 0.21
PCDH8-202ENST00000377942 RNF222A6NCQ9 220 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 MPTX1A8MV57 137 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 AMY1AP04745 511 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 PRCDQ00LT1 54 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 WDR25Q64LD2 544 aaPredicted RBP16.35■□□□□ 0.21
PCDH8-202ENST00000377942 PVRIGQ6DKI7 326 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 PIP4P1Q86T03 277 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 BET1LQ9NYM9 111 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 CACNA1BQ00975 2339 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 TRBV6-6A0A0A6YYG2 114 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 NAPSAO96009 420 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 LHFPL5Q8TAF8 219 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 IGKV1D-8A0A087WSZ0 117 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 FBLL1A6NHQ2 334 aaKnown RBP16.35■□□□□ 0.21
PCDH8-202ENST00000377942 SCGB1D4Q6XE38 83 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 LHFPL1Q86WI0 220 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 OR8A1Q8NGG7 326 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 ANAPC1Q9H1A4 1944 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 PGLYRP4Q96LB8 373 aa16.35■□□□□ 0.21
PCDH8-202ENST00000377942 ERVH48-1M5A8F1 160 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 TFF1P04155 84 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 MINOS1Q5TGZ0 78 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 FAM53AQ6NSI3 398 aaPredicted RBP16.34■□□□□ 0.21
PCDH8-202ENST00000377942 FAM159AQ6UWV7 190 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 RNF5Q99942 180 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 MINOS1-NBL1R4GNA1 71 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 TRBV9A0A0B4J1U6 114 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 TIMM23O14925 209 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 SMIM6P0DI80 62 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 CLEC19AQ6UXS0 136 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 GPR82Q96P67 336 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 METRNQ9UJH8 293 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 FRMPD3Q5JV73 1810 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 IGHV3OR16-12A0A075B7B8 117 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 TRAV14DV4A0A0A6YYC5 116 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 MYOD1P15172 320 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 CENPWQ5EE01 88 aa16.34■□□□□ 0.21
PCDH8-202ENST00000377942 PEMTQ9UBM1 199 aa16.33■□□□□ 0.21
PCDH8-202ENST00000377942 PLXNA4Q9HCM2 1894 aa16.33■□□□□ 0.21
PCDH8-202ENST00000377942 PSPNO60542 156 aa16.33■□□□□ 0.2
PCDH8-202ENST00000377942 EIF3GO75821 320 aaKnown RBP eCLIP16.33■□□□□ 0.2
PCDH8-202ENST00000377942 IGHV3-23P01764 117 aa16.33■□□□□ 0.2
PCDH8-202ENST00000377942 TCF24Q7RTU0 167 aa16.33■□□□□ 0.2
PCDH8-202ENST00000377942 MARVELD3Q96A59 401 aa16.33■□□□□ 0.2
PCDH8-202ENST00000377942 CACNA1GO43497 2377 aa16.33■□□□□ 0.2
PCDH8-202ENST00000377942 A0A0B4J293 547 aa16.33■□□□□ 0.2
PCDH8-202ENST00000377942 DLX1P56177 255 aa16.33■□□□□ 0.2
PCDH8-202ENST00000377942 IFT22Q9H7X7 185 aa16.33■□□□□ 0.2
PCDH8-202ENST00000377942 IGHV3OR16-13A0A075B7E8 117 aa16.33■□□□□ 0.2
PCDH8-202ENST00000377942 IGHV3-74A0A0B4J1X5 117 aa16.33■□□□□ 0.2
PCDH8-202ENST00000377942 IGHV1-8P0DP01 117 aa16.33■□□□□ 0.2
PCDH8-202ENST00000377942 SFRP2Q96HF1 295 aa16.33■□□□□ 0.2
PCDH8-202ENST00000377942 MAP1LC3AQ9H492 121 aa16.33■□□□□ 0.2
PCDH8-202ENST00000377942 IGHV2-26A0A0B4J1V2 119 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 FOXI3A8MTJ6 420 aaPredicted RBP16.32■□□□□ 0.2
PCDH8-202ENST00000377942 C3orf36Q3SXR2 165 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 HLA-DRB1P01911 266 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 AREGP15514 252 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 RNF126Q9BV68 326 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 LOC389332A0A1B0GUA5 103 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 DPRXA6NFQ7 191 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 RAMP3O60896 148 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 SNRNP200O75643 2136 aaKnown RBP16.32■□□□□ 0.2
PCDH8-202ENST00000377942 WNT2P09544 360 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 OR9G9P0C7N8 305 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 FHL1Q13642 323 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 CD177Q8N6Q3 437 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 CGAP01215 116 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 AKAP6Q13023 2319 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 TMEM200BQ69YZ2 307 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 ZFP30Q9Y2G7 519 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 ZNF257Q9Y2Q1 563 aa16.32■□□□□ 0.2
PCDH8-202ENST00000377942 B4DSR2 109 aa16.31■□□□□ 0.2
PCDH8-202ENST00000377942 VDAC2P45880 294 aaPredicted RBP16.31■□□□□ 0.2
PCDH8-202ENST00000377942 CD69Q07108 199 aa16.31■□□□□ 0.2
PCDH8-202ENST00000377942 S4R3C0 116 aa16.31■□□□□ 0.2
PCDH8-202ENST00000377942 M0R1W7 72 aa16.31■□□□□ 0.2
PCDH8-202ENST00000377942 ZNF600Q6ZNG1 722 aa16.31■□□□□ 0.2
PCDH8-202ENST00000377942 LY6G6FQ5SQ64 297 aa16.31■□□□□ 0.2
PCDH8-202ENST00000377942 MYO7BQ6PIF6 2116 aa16.31■□□□□ 0.2
PCDH8-202ENST00000377942 MRPL18Q9H0U6 180 aaKnown RBP16.3■□□□□ 0.2
PCDH8-202ENST00000377942 PEX7O00628 323 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms