RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 RAI1Q7Z5J4 1906 aaPredicted RBP16.64■□□□□ 0.25
CLN5-201ENST00000377453 TRAV5A0A0B4J249 113 aa16.63■□□□□ 0.25
CLN5-201ENST00000377453 FCN1O00602 326 aa16.63■□□□□ 0.25
CLN5-201ENST00000377453 SSBP2P81877 361 aaPredicted RBP16.63■□□□□ 0.25
CLN5-201ENST00000377453 TOMM20LQ6UXN7 152 aa16.63■□□□□ 0.25
CLN5-201ENST00000377453 ST6GALNAC3Q8NDV1 305 aa16.63■□□□□ 0.25
CLN5-201ENST00000377453 SNURFLB1AK76 121 aa16.63■□□□□ 0.25
CLN5-201ENST00000377453 CT45A6P0DMU7 189 aa16.63■□□□□ 0.25
CLN5-201ENST00000377453 CT45A5P0DMU8 189 aa16.63■□□□□ 0.25
CLN5-201ENST00000377453 CT45A7P0DMV0 189 aa16.63■□□□□ 0.25
CLN5-201ENST00000377453 MMD2Q8IY49 270 aa16.63■□□□□ 0.25
CLN5-201ENST00000377453 ASCL3Q9NQ33 180 aa16.63■□□□□ 0.25
CLN5-201ENST00000377453 TRGV10A0A0A0MS01 117 aa16.62■□□□□ 0.25
CLN5-201ENST00000377453 CA1P00915 261 aaPredicted RBP16.62■□□□□ 0.25
CLN5-201ENST00000377453 YPEL3P61236 119 aaPredicted RBP16.62■□□□□ 0.25
CLN5-201ENST00000377453 FAM27E3Q08E93 113 aa16.62■□□□□ 0.25
CLN5-201ENST00000377453 LHFPL4Q7Z7J7 247 aa16.62■□□□□ 0.25
CLN5-201ENST00000377453 GAFA1Q96PS6 74 aa16.62■□□□□ 0.25
CLN5-201ENST00000377453 FAM103A1Q9BTL3 118 aaKnown RBP16.62■□□□□ 0.25
CLN5-201ENST00000377453 PLEKHA3Q9HB20 300 aa16.62■□□□□ 0.25
CLN5-201ENST00000377453 GVINP1Q7Z2Y8 2422 aa16.62■□□□□ 0.25
CLN5-201ENST00000377453 RPL29P47914 159 aaKnown RBP16.62■□□□□ 0.25
CLN5-201ENST00000377453 LGALS4P56470 323 aa16.62■□□□□ 0.25
CLN5-201ENST00000377453 LINC00479Q96M42 142 aa16.62■□□□□ 0.25
CLN5-201ENST00000377453 HSPB9Q9BQS6 159 aa16.62■□□□□ 0.25
CLN5-201ENST00000377453 V9GYV3 84 aa16.62■□□□□ 0.25
CLN5-201ENST00000377453 GGTLC3B5MD39 225 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 E7EUB6 86 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 FTH1P19P0C7X4 201 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 CRISP2P16562 243 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 TNFAIP6P98066 277 aaPredicted RBP16.61■□□□□ 0.25
CLN5-201ENST00000377453 MZT1Q08AG7 82 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 ZNF439Q8NDP4 499 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 NEUROG1Q92886 237 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 SLC45A2Q9UMX9 530 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 FAM215AQ9Y5M1 114 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 DSCAML1Q8TD84 2053 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 IGHV1-46P01743 117 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 KIR2DS2P43631 304 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 RAB7AP51149 207 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 CCL8P80075 99 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 OR2T6Q8NHC8 308 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 SLC35D1Q9NTN3 355 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 KALRNO60229 2985 aa16.61■□□□□ 0.25
CLN5-201ENST00000377453 ATMQ13315 3056 aa16.6■□□□□ 0.25
CLN5-201ENST00000377453 PKDREJQ9NTG1 2253 aa16.6■□□□□ 0.25
CLN5-201ENST00000377453 G0S2P27469 103 aa16.6■□□□□ 0.25
CLN5-201ENST00000377453 UHRF2Q96PU4 802 aa16.6■□□□□ 0.25
CLN5-201ENST00000377453 MUC6Q6W4X9 2439 aa16.6■□□□□ 0.25
CLN5-201ENST00000377453 TEX50A0A1B0GTY4 177 aa16.6■□□□□ 0.25
CLN5-201ENST00000377453 K7EM74 188 aa16.6■□□□□ 0.25
CLN5-201ENST00000377453 SAA1P0DJI8 122 aaPredicted RBP16.6■□□□□ 0.25
CLN5-201ENST00000377453 CFHR2P36980 270 aa16.6■□□□□ 0.25
CLN5-201ENST00000377453 GNG4P50150 75 aa16.6■□□□□ 0.25
CLN5-201ENST00000377453 SUMO1P63165 101 aaKnown RBP16.6■□□□□ 0.25
CLN5-201ENST00000377453 RAB31Q13636 194 aa16.6■□□□□ 0.25
CLN5-201ENST00000377453 IGFL2Q6UWQ7 119 aa16.6■□□□□ 0.25
CLN5-201ENST00000377453 BAGE3Q86Y29 109 aa16.6■□□□□ 0.25
CLN5-201ENST00000377453 BAGE2Q86Y30 109 aa16.6■□□□□ 0.25
CLN5-201ENST00000377453 HELTA6NFD8 242 aa16.59■□□□□ 0.25
CLN5-201ENST00000377453 MGST1P10620 155 aaKnown RBP16.59■□□□□ 0.25
CLN5-201ENST00000377453 CCL3L1P16619 93 aa16.59■□□□□ 0.25
CLN5-201ENST00000377453 DIAPH2-AS1Q14236 149 aa16.59■□□□□ 0.25
CLN5-201ENST00000377453 C10orf55Q5SWW7 151 aa16.59■□□□□ 0.25
CLN5-201ENST00000377453 STUMQ69YW2 141 aa16.59■□□□□ 0.25
CLN5-201ENST00000377453 RNF7Q9UBF6 113 aa16.59■□□□□ 0.25
CLN5-201ENST00000377453 PLXNB1O43157 2135 aa16.59■□□□□ 0.25
CLN5-201ENST00000377453 CHRNB4P30926 498 aa16.59■□□□□ 0.25
CLN5-201ENST00000377453 GLRXP35754 106 aa16.59■□□□□ 0.25
CLN5-201ENST00000377453 RPEL1Q2QD12 228 aa16.59■□□□□ 0.25
CLN5-201ENST00000377453 MRPL54Q6P161 138 aaKnown RBP16.59■□□□□ 0.25
CLN5-201ENST00000377453 C11orf52Q96A22 123 aa16.59■□□□□ 0.25
CLN5-201ENST00000377453 PAM16Q9Y3D7 125 aa16.59■□□□□ 0.25
CLN5-201ENST00000377453 UPK2O00526 184 aa16.58■□□□□ 0.25
CLN5-201ENST00000377453 MRPL20Q9BYC9 149 aaKnown RBP16.58■□□□□ 0.25
CLN5-201ENST00000377453 TUBG2Q9NRH3 451 aa16.58■□□□□ 0.25
CLN5-201ENST00000377453 NAV3Q8IVL0 2385 aa16.58■□□□□ 0.24
CLN5-201ENST00000377453 C1orf194Q5T5A4 169 aa16.58■□□□□ 0.24
CLN5-201ENST00000377453 ZNF705AQ6ZN79 300 aaPredicted RBP16.58■□□□□ 0.24
CLN5-201ENST00000377453 VN1R17PQ8TDU5 208 aa16.58■□□□□ 0.24
CLN5-201ENST00000377453 TMEM106BQ9NUM4 274 aa16.58■□□□□ 0.24
CLN5-201ENST00000377453 MBD3L4A6NDZ8 208 aaPredicted RBP16.57■□□□□ 0.24
CLN5-201ENST00000377453 MBD3L3A6NE82 208 aaPredicted RBP16.57■□□□□ 0.24
CLN5-201ENST00000377453 MBD3L5A6NJ08 208 aaPredicted RBP16.57■□□□□ 0.24
CLN5-201ENST00000377453 TCAPO15273 167 aa16.57■□□□□ 0.24
CLN5-201ENST00000377453 SSTP61278 116 aa16.57■□□□□ 0.24
CLN5-201ENST00000377453 BEND2Q8NDZ0 799 aa16.57■□□□□ 0.24
CLN5-201ENST00000377453 MBD3L2Q8NHZ7 208 aaPredicted RBP16.57■□□□□ 0.24
CLN5-201ENST00000377453 TXNDC17Q9BRA2 123 aa16.57■□□□□ 0.24
CLN5-201ENST00000377453 SSBP3Q9BWW4 388 aaPredicted RBP16.57■□□□□ 0.24
CLN5-201ENST00000377453 PCNX1Q96RV3 2341 aa16.57■□□□□ 0.24
CLN5-201ENST00000377453 PRCDQ00LT1 54 aa16.57■□□□□ 0.24
CLN5-201ENST00000377453 BTF3L4Q96K17 158 aa16.57■□□□□ 0.24
CLN5-201ENST00000377453 GNB4Q9HAV0 340 aa16.57■□□□□ 0.24
CLN5-201ENST00000377453 SERTAD4Q9NUC0 356 aa16.57■□□□□ 0.24
CLN5-201ENST00000377453 MT-CO2P00403 227 aa16.56■□□□□ 0.24
CLN5-201ENST00000377453 SELENOTP62341 195 aa16.56■□□□□ 0.24
CLN5-201ENST00000377453 PRB3Q04118 309 aaPredicted RBP16.56■□□□□ 0.24
CLN5-201ENST00000377453 RCHY1Q96PM5 261 aa16.56■□□□□ 0.24
CLN5-201ENST00000377453 NAT8BQ9UHF3 227 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms