RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 GFI1Q99684 422 aa14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 BET1LQ9NYM9 111 aa14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 KIF26BQ2KJY2 2108 aa14.92□□□□□ -0.02
CLSTN1-202ENST00000377298 GPR183P32249 361 aa14.91□□□□□ -0.02
CLSTN1-202ENST00000377298 PNRC2Q9NPJ4 139 aaKnown RBP14.91□□□□□ -0.02
CLSTN1-202ENST00000377298 K7ENP7 123 aa14.91□□□□□ -0.02
CLSTN1-202ENST00000377298 C19orf54Q5BKX5 351 aa14.91□□□□□ -0.02
CLSTN1-202ENST00000377298 C18orf12Q96KH6 178 aa14.91□□□□□ -0.02
CLSTN1-202ENST00000377298 A0A0A6YYD4 124 aa14.91□□□□□ -0.02
CLSTN1-202ENST00000377298 TMEM8BA6NDV4 472 aa14.91□□□□□ -0.02
CLSTN1-202ENST00000377298 DLX1P56177 255 aa14.91□□□□□ -0.02
CLSTN1-202ENST00000377298 COLCA1Q6ZS62 124 aa14.91□□□□□ -0.02
CLSTN1-202ENST00000377298 TEX45Q8NA69 505 aa14.91□□□□□ -0.02
CLSTN1-202ENST00000377298 CXorf65A6NEN9 183 aa14.91□□□□□ -0.02
CLSTN1-202ENST00000377298 ZNF324BQ6AW86 544 aaPredicted RBP14.91□□□□□ -0.02
CLSTN1-202ENST00000377298 IGHV3OR16-13A0A075B7E8 117 aa14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 IGHV3-74A0A0B4J1X5 117 aa14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 C15orf61A6NNL5 157 aa14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 IGHV3-23P01764 117 aa14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 AGAP20933 346 aa14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 HIST1H1AQ02539 215 aaPredicted RBP14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 CARHSP1Q9Y2V2 147 aaKnown RBP14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 LOC389332A0A1B0GUA5 103 aa14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 TFF1P04155 84 aa14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 ICAM4Q14773 271 aa14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 RPUSD1Q9UJJ7 312 aaKnown RBP14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 ZNF25P17030 456 aaPredicted RBP14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 ATRAIDQ6UW56 229 aa14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 TMEM144Q7Z5S9 345 aa14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 FAM169BQ8N8A8 192 aa14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 PGLYRP4Q96LB8 373 aa14.9□□□□□ -0.02
CLSTN1-202ENST00000377298 ZNF506Q5JVG8 444 aa14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 LYRM7Q5U5X0 104 aa14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 FAM53AQ6NSI3 398 aaPredicted RBP14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 PRSS22Q9GZN4 317 aa14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 A0A1W2PRX2 142 aa14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 TRGC1P0CF51 173 aa14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 DUTP33316 252 aaKnown RBP14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 PLAURQ03405 335 aa14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 S4R3C0 116 aa14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 AMY1AP04745 511 aa14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 ESPL1Q14674 2120 aa14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 TFF3Q07654 80 aa14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 ZNF841Q6ZN19 808 aa14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 CLDN16Q9Y5I7 305 aa14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 TMEM178BH3BS89 294 aa14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 FOXL2NBQ6ZUU3 175 aa14.89□□□□□ -0.03
CLSTN1-202ENST00000377298 CACNA1HO95180 2353 aa14.88□□□□□ -0.03
CLSTN1-202ENST00000377298 IGKV3-20P01619 116 aa14.88□□□□□ -0.03
CLSTN1-202ENST00000377298 FAM159AQ6UWV7 190 aa14.88□□□□□ -0.03
CLSTN1-202ENST00000377298 CLEC19AQ6UXS0 136 aa14.88□□□□□ -0.03
CLSTN1-202ENST00000377298 DCAF16Q9NXF7 216 aa14.88□□□□□ -0.03
CLSTN1-202ENST00000377298 FAM90A9PA6NNJ1 464 aa14.88□□□□□ -0.03
CLSTN1-202ENST00000377298 CDX1P47902 265 aaPredicted RBP14.88□□□□□ -0.03
CLSTN1-202ENST00000377298 ZNF525Q8N782 197 aa14.88□□□□□ -0.03
CLSTN1-202ENST00000377298 FOXI3A8MTJ6 420 aaPredicted RBP14.88□□□□□ -0.03
CLSTN1-202ENST00000377298 VENTXO95231 258 aa14.88□□□□□ -0.03
CLSTN1-202ENST00000377298 TMEM42Q69YG0 159 aa14.88□□□□□ -0.03
CLSTN1-202ENST00000377298 HEPN1Q6WQI6 88 aa14.88□□□□□ -0.03
CLSTN1-202ENST00000377298 OR52E5Q8NH55 327 aa14.88□□□□□ -0.03
CLSTN1-202ENST00000377298 SGK494Q96LW2 274 aa14.88□□□□□ -0.03
CLSTN1-202ENST00000377298 TGIF2-C20orf24A0A0A6YYL0 155 aa14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 LBHQ53QV2 105 aaPredicted RBP14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 DPH3Q96FX2 82 aa14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 MED12Q93074 2177 aa14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 IGKV1-27A0A075B6S5 117 aa14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 SAMD13Q5VXD3 122 aa14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 CACNA1DQ01668 2161 aa14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 RPLP1P05386 114 aaKnown RBP14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 CENPWQ5EE01 88 aa14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 MIEN1Q9BRT3 115 aa14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 MDC1Q14676 2089 aaKnown RBP14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 IGHV3-49A0A0A0MS15 119 aa14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 TRAV14DV4A0A0A6YYC5 116 aa14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 RNF222A6NCQ9 220 aa14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 GTF2H5Q6ZYL4 71 aa14.87□□□□□ -0.03
CLSTN1-202ENST00000377298 FREM3P0C091 2139 aa14.86□□□□□ -0.03
CLSTN1-202ENST00000377298 TIMM23O14925 209 aa14.86□□□□□ -0.03
CLSTN1-202ENST00000377298 OTX1P32242 354 aaPredicted RBP14.86□□□□□ -0.03
CLSTN1-202ENST00000377298 PAM16Q9Y3D7 125 aa14.86□□□□□ -0.03
CLSTN1-202ENST00000377298 TBX15Q96SF7 602 aa14.86□□□□□ -0.03
CLSTN1-202ENST00000377298 MAP1LC3AQ9H492 121 aa14.86□□□□□ -0.03
CLSTN1-202ENST00000377298 IGKV1D-8A0A087WSZ0 117 aa14.86□□□□□ -0.03
CLSTN1-202ENST00000377298 ZNF207O43670 478 aaKnown RBP14.86□□□□□ -0.03
CLSTN1-202ENST00000377298 ZNF474Q6S9Z5 364 aaPredicted RBP14.86□□□□□ -0.03
CLSTN1-202ENST00000377298 TCF24Q7RTU0 167 aa14.86□□□□□ -0.03
CLSTN1-202ENST00000377298 GPR61Q9BZJ8 451 aa14.86□□□□□ -0.03
CLSTN1-202ENST00000377298 SFRP2Q96HF1 295 aa14.86□□□□□ -0.03
CLSTN1-202ENST00000377298 ZFP30Q9Y2G7 519 aa14.86□□□□□ -0.03
CLSTN1-202ENST00000377298 TANC1Q9C0D5 1861 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 ETV2O00321 342 aaPredicted RBP14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 BTF3P20290 206 aaKnown RBP14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 VDAC2P45880 294 aaPredicted RBP14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 IGFL3Q6UXB1 125 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 DMRT1Q9Y5R6 373 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 LDLRAD4O15165 306 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 RAMP3O60896 148 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 CGAP01215 116 aa14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 PRB3Q04118 309 aaPredicted RBP14.85□□□□□ -0.03
CLSTN1-202ENST00000377298 VN1R17PQ8TDU5 208 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms