RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 RNF114Q9Y508 228 aa10.81□□□□□ -0.68
ACTN1-202ENST00000376839 YLPM1P49750 1951 aaKnown RBP10.81□□□□□ -0.68
ACTN1-202ENST00000376839 TANC2Q9HCD6 1990 aa10.81□□□□□ -0.68
ACTN1-202ENST00000376839 TRAV17A0A0B4J275 112 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 HELTA6NFD8 242 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 M0R143 59 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 SLC35B1P78383 322 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-202ENST00000376839 PLEKHA3Q9HB20 300 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 GGTLC3B5MD39 225 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 OR10J4P0C629 311 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 RAB4AP20338 218 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 PAFAH1B2P68402 229 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 IGFL2Q6UWQ7 119 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 C1orf174Q8IYL3 243 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 LOXL4Q96JB6 756 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 SLC25A10Q9UBX3 287 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-202ENST00000376839 RAI1Q7Z5J4 1906 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-202ENST00000376839 M0R296 226 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 OR7C2O60412 319 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 TCL1AP56279 114 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 PRCDQ00LT1 54 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 POU2AF1Q16633 256 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 TEX43Q6ZNM6 134 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 RPRMLQ8N4K4 120 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 FAM216BQ8N7L0 139 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 OR9G1Q8NH87 305 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 IL19Q9UHD0 177 aa10.8□□□□□ -0.68
ACTN1-202ENST00000376839 UPK2O00526 184 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 CT45A6P0DMU7 189 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 CT45A5P0DMU8 189 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 CT45A7P0DMV0 189 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 TDGF1P3P51864 188 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 ZNF124Q15973 351 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 ZNF474Q6S9Z5 364 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-202ENST00000376839 ZNF705AQ6ZN79 300 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-202ENST00000376839 FAM169BQ8N8A8 192 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 CCL13Q99616 98 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 SFXN3Q9BWM7 321 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 GNB4Q9HAV0 340 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 PARD6AQ9NPB6 346 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 DCAF16Q9NXF7 216 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 PRNDQ9UKY0 176 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 RP1L1Q8IWN7 2480 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-202ENST00000376839 G0S2P27469 103 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 RANP62826 216 aaKnown RBP10.79□□□□□ -0.68
ACTN1-202ENST00000376839 KIAA1644Q3SXP7 199 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 ASPHD1Q5U4P2 390 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 STUMQ69YW2 141 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 OR5AU1Q8NGC0 362 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 VN1R17PQ8TDU5 208 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 RND1Q92730 232 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 CORO2AQ92828 525 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 GAFA1Q96PS6 74 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 SAMD10Q9BYL1 202 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 GCM1Q9NP62 436 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 TMEM167BQ9NRX6 74 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 PAM16Q9Y3D7 125 aa10.79□□□□□ -0.68
ACTN1-202ENST00000376839 TEX50A0A1B0GTY4 177 aa10.78□□□□□ -0.68
ACTN1-202ENST00000376839 FNDC10F2Z333 226 aa10.78□□□□□ -0.68
ACTN1-202ENST00000376839 GLRXP35754 106 aa10.78□□□□□ -0.68
ACTN1-202ENST00000376839 COMPP49747 757 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-202ENST00000376839 Q0VG73 95 aa10.78□□□□□ -0.68
ACTN1-202ENST00000376839 OR10W1Q8NGF6 305 aa10.78□□□□□ -0.68
ACTN1-202ENST00000376839 FAM222BQ8WU58 562 aa10.78□□□□□ -0.68
ACTN1-202ENST00000376839 ADTRPQ96IZ2 230 aa10.78□□□□□ -0.68
ACTN1-202ENST00000376839 SLC35D1Q9NTN3 355 aa10.78□□□□□ -0.68
ACTN1-202ENST00000376839 TECRQ9NZ01 308 aaKnown RBP10.78□□□□□ -0.68
ACTN1-202ENST00000376839 NAT8BQ9UHF3 227 aa10.78□□□□□ -0.68
ACTN1-202ENST00000376839 ARFGEF3Q5TH69 2177 aa10.78□□□□□ -0.68
ACTN1-202ENST00000376839 IGLV2-8P01709 118 aa10.78□□□□□ -0.68
ACTN1-202ENST00000376839 SUMO1P63165 101 aaKnown RBP10.78□□□□□ -0.68
ACTN1-202ENST00000376839 MORN5Q5VZ52 161 aa10.78□□□□□ -0.68
ACTN1-202ENST00000376839 GNB1LQ9BYB4 327 aa10.78□□□□□ -0.68
ACTN1-202ENST00000376839 FBXL7Q9UJT9 491 aa10.78□□□□□ -0.68
ACTN1-202ENST00000376839 CX3CL1P78423 397 aa10.77□□□□□ -0.68
ACTN1-202ENST00000376839 FAM103A1Q9BTL3 118 aaKnown RBP10.77□□□□□ -0.68
ACTN1-202ENST00000376839 NCOR1P1Q9H4R4 102 aa10.77□□□□□ -0.68
ACTN1-202ENST00000376839 RNF7Q9UBF6 113 aa10.77□□□□□ -0.68
ACTN1-202ENST00000376839 ZNF257Q9Y2Q1 563 aa10.77□□□□□ -0.68
ACTN1-202ENST00000376839 ARL2-SNX15V9GYD0 113 aa10.77□□□□□ -0.68
ACTN1-202ENST00000376839 IGLV3-9A0A075B6K5 115 aa10.77□□□□□ -0.69
ACTN1-202ENST00000376839 OR5G3P0C626 314 aa10.77□□□□□ -0.69
ACTN1-202ENST00000376839 SAA1P0DJI8 122 aaPredicted RBP10.77□□□□□ -0.69
ACTN1-202ENST00000376839 RNASE2P10153 161 aaKnown RBP10.77□□□□□ -0.69
ACTN1-202ENST00000376839 TMEM136Q6ZRR5 245 aa10.77□□□□□ -0.69
ACTN1-202ENST00000376839 TRAV5A0A0B4J249 113 aa10.76□□□□□ -0.69
ACTN1-202ENST00000376839 MBD3L4A6NDZ8 208 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-202ENST00000376839 MBD3L3A6NE82 208 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-202ENST00000376839 MBD3L5A6NJ08 208 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-202ENST00000376839 TIGITQ495A1 244 aa10.76□□□□□ -0.69
ACTN1-202ENST00000376839 TIMM23BQ5SRD1 257 aa10.76□□□□□ -0.69
ACTN1-202ENST00000376839 SLC25A48Q6ZT89 311 aaKnown RBP10.76□□□□□ -0.69
ACTN1-202ENST00000376839 NHLRC2Q8NBF2 726 aa10.76□□□□□ -0.69
ACTN1-202ENST00000376839 MBD3L2Q8NHZ7 208 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-202ENST00000376839 RCHY1Q96PM5 261 aa10.76□□□□□ -0.69
ACTN1-202ENST00000376839 C20orf144Q9BQM9 153 aa10.76□□□□□ -0.69
ACTN1-202ENST00000376839 RAB9BQ9NP90 201 aa10.76□□□□□ -0.69
ACTN1-202ENST00000376839 TRBV9A0A0B4J1U6 114 aa10.76□□□□□ -0.69
ACTN1-202ENST00000376839 CA1P00915 261 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms