RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 LINC00574Q9H8X3 128 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 PATZ1Q9HBE1 687 aaKnown RBP6.78□□□□□ -1.32
UBR4-202ENST00000375224 IDI2-AS1Q9NZ38 188 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 FUT9Q9Y231 359 aa6.78□□□□□ -1.32
UBR4-202ENST00000375224 PRRC2CQ9Y520 2896 aaKnown RBP6.78□□□□□ -1.32
UBR4-202ENST00000375224 TRAV1-1A0A0B4J248 108 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 A0A1B0GW15 77 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 CEBPZOSA8MTT3 80 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 FCGR3BO75015 233 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 THBS3P49746 956 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 TPPP2P59282 170 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 MEF2CQ06413 473 aaPredicted RBP6.77□□□□□ -1.33
UBR4-202ENST00000375224 FAM201AQ5SY85 155 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 DEFB108BQ8NET1 73 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 BTF3L4Q96K17 158 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 CCL13Q99616 98 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 RARRES2Q99969 163 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 IFI27L2Q9H2X8 130 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 USF3Q68DE3 2245 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 DYSFO75923 2080 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 H7BYZ3 331 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 GYPAP02724 150 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 FAM87AP0C7U9 286 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 CNN1P51911 297 aaKnown RBP6.77□□□□□ -1.33
UBR4-202ENST00000375224 RUNX1Q01196 453 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 TLE1Q04724 770 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 PNRC1Q12796 327 aaPredicted RBP6.77□□□□□ -1.33
UBR4-202ENST00000375224 OR10P1Q8NGE3 313 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 OR1N2Q8NGR9 330 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 OR52E5Q8NH55 327 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 OR4A16Q8NH70 328 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 TMEM147Q9BVK8 224 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 SCRT1Q9BWW7 348 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 SAMD10Q9BYL1 202 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 WDR61Q9GZS3 305 aaKnown RBP6.77□□□□□ -1.33
UBR4-202ENST00000375224 MS4A5Q9H3V2 200 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 SAP30LQ9HAJ7 183 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 TBL2Q9Y4P3 447 aaKnown RBP6.77□□□□□ -1.33
UBR4-202ENST00000375224 DCHS1Q96JQ0 3298 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 H0Y8G0 127 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 CCL8P80075 99 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 TDRG1Q3Y452 100 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 TMEM106BQ9NUM4 274 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 LINC00312Q9Y6C7 94 aa6.77□□□□□ -1.33
UBR4-202ENST00000375224 TANC2Q9HCD6 1990 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 PPIAL4EA0A075B759 164 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 TRGV8A0A0C4DH27 118 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 MAP1LC3B2A6NCE7 125 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 PPIAL4DF5H284 164 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 PPIAL4FP0DN26 164 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 FAM3BP58499 235 aaPredicted RBP6.76□□□□□ -1.33
UBR4-202ENST00000375224 ARL16Q0P5N6 197 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 BSXQ3C1V8 233 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 SPATA45Q537H7 98 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 PRR30Q53SZ7 412 aaPredicted RBP6.76□□□□□ -1.33
UBR4-202ENST00000375224 SPSB3Q6PJ21 355 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 ERASQ7Z444 233 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 HAPLN4Q86UW8 402 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 OR4C12Q96R67 309 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 SIGMAR1Q99720 223 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 MAP1LC3BQ9GZQ8 125 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 SMPXQ9UHP9 88 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 SLC45A2Q9UMX9 530 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 DSCAMO60469 2012 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 RP1L1Q8IWN7 2480 aaPredicted RBP6.76□□□□□ -1.33
UBR4-202ENST00000375224 MED19A0JLT2 244 aaPredicted RBP6.76□□□□□ -1.33
UBR4-202ENST00000375224 LGALS7P47929 136 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 GNB2P62879 340 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 KLRB1Q12918 225 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 PET117Q6UWS5 81 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 OR8I2Q8N0Y5 310 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 CYB561D1Q8N8Q1 229 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 NECAP1Q8NC96 275 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 CMTM2Q8TAZ6 248 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 TAF15Q92804 592 aaKnown RBP eCLIP6.76□□□□□ -1.33
UBR4-202ENST00000375224 PLCE1Q9P212 2302 aa6.76□□□□□ -1.33
UBR4-202ENST00000375224 ZG16O60844 167 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 PROP1O75360 226 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 CD3EP07766 207 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 ZNF134P52741 427 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 CT45A1Q5HYN5 189 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 CENPVQ7Z7K6 275 aaPredicted RBP6.75□□□□□ -1.33
UBR4-202ENST00000375224 CT45A3Q8NHU0 189 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 MBD3L1Q8WWY6 194 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 AP1S3Q96PC3 154 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 CTDSP1Q9GZU7 261 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 DYNLRB1Q9NP97 96 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 SLC25A10Q9UBX3 287 aaPredicted RBP6.75□□□□□ -1.33
UBR4-202ENST00000375224 DSCAML1Q8TD84 2053 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 TMEM178BH3BS89 294 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 TMPRSS2O15393 492 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 CA7P43166 264 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 PDLIM3Q53GG5 364 aaPredicted RBP6.75□□□□□ -1.33
UBR4-202ENST00000375224 RPL39P5Q59GN2 51 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 TEX43Q6ZNM6 134 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 FAM216BQ8N7L0 139 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 TMEM170AQ8WVE7 144 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 RNASE6Q93091 150 aaKnown RBP6.75□□□□□ -1.33
UBR4-202ENST00000375224 SFRP2Q96HF1 295 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 RSG1Q9BU20 258 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms