RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 ANKRD20A5PA0PJZ0 165 aa12.8□□□□□ -0.36
H2AFX-201ENST00000375167 FCGR3BO75015 233 aa12.8□□□□□ -0.36
H2AFX-201ENST00000375167 CRYZL1O95825 349 aa12.8□□□□□ -0.36
H2AFX-201ENST00000375167 CD3DP04234 171 aa12.8□□□□□ -0.36
H2AFX-201ENST00000375167 RBMY1A1P0DJD3 496 aaKnown RBP12.8□□□□□ -0.36
H2AFX-201ENST00000375167 CBLN1P23435 193 aa12.8□□□□□ -0.36
H2AFX-201ENST00000375167 EXOSC2Q13868 293 aaKnown RBP12.8□□□□□ -0.36
H2AFX-201ENST00000375167 ZNF79Q15937 498 aa12.8□□□□□ -0.36
H2AFX-201ENST00000375167 TCTEX1D2Q8WW35 142 aa12.8□□□□□ -0.36
H2AFX-201ENST00000375167 CACNG8Q8WXS5 425 aa12.8□□□□□ -0.36
H2AFX-201ENST00000375167 TMEM68Q96MH6 324 aa12.8□□□□□ -0.36
H2AFX-201ENST00000375167 SRRM4A7MD48 611 aaKnown RBP12.79□□□□□ -0.36
H2AFX-201ENST00000375167 EPM2AB3EWF7 344 aa12.79□□□□□ -0.36
H2AFX-201ENST00000375167 CRYGBP07316 175 aa12.79□□□□□ -0.36
H2AFX-201ENST00000375167 RPL35AP18077 110 aaKnown RBP12.79□□□□□ -0.36
H2AFX-201ENST00000375167 GNRHRP30968 328 aa12.79□□□□□ -0.36
H2AFX-201ENST00000375167 PPP5CP53041 499 aa12.79□□□□□ -0.36
H2AFX-201ENST00000375167 ZNF818PQ6ZRF7 136 aa12.79□□□□□ -0.36
H2AFX-201ENST00000375167 SLC38A6Q8IZM9 456 aa12.79□□□□□ -0.36
H2AFX-201ENST00000375167 C7orf50Q9BRJ6 194 aaKnown RBP12.79□□□□□ -0.36
H2AFX-201ENST00000375167 AKIP1Q9NQ31 210 aa12.79□□□□□ -0.36
H2AFX-201ENST00000375167 MCUBQ9NWR8 336 aa12.79□□□□□ -0.36
H2AFX-201ENST00000375167 NAP1L6A6NFF2 107 aa12.78□□□□□ -0.36
H2AFX-201ENST00000375167 TNFSF12O43508 249 aa12.78□□□□□ -0.36
H2AFX-201ENST00000375167 CATR1Q13166 79 aa12.78□□□□□ -0.36
H2AFX-201ENST00000375167 OR2B11Q5JQS5 317 aa12.78□□□□□ -0.36
H2AFX-201ENST00000375167 OR4S2Q8NH73 311 aa12.78□□□□□ -0.36
H2AFX-201ENST00000375167 ZFAND1Q8TCF1 268 aa12.78□□□□□ -0.36
H2AFX-201ENST00000375167 ZNF486Q96H40 463 aaPredicted RBP12.78□□□□□ -0.36
H2AFX-201ENST00000375167 GPHA2Q96T91 129 aa12.78□□□□□ -0.36
H2AFX-201ENST00000375167 MLXQ9UH92 298 aa12.78□□□□□ -0.36
H2AFX-201ENST00000375167 M0QYG6 137 aa12.77□□□□□ -0.37
H2AFX-201ENST00000375167 LGALS9O00182 355 aa12.77□□□□□ -0.37
H2AFX-201ENST00000375167 UCP3P55916 312 aa12.77□□□□□ -0.37
H2AFX-201ENST00000375167 BRWD1-AS2P59051 145 aa12.77□□□□□ -0.37
H2AFX-201ENST00000375167 UBE2KP61086 200 aa12.77□□□□□ -0.37
H2AFX-201ENST00000375167 SURF2Q15527 256 aaPredicted RBP12.77□□□□□ -0.37
H2AFX-201ENST00000375167 VMA21Q3ZAQ7 101 aa12.77□□□□□ -0.37
H2AFX-201ENST00000375167 SCGB2B2Q4G0G5 96 aa12.77□□□□□ -0.37
H2AFX-201ENST00000375167 OR2C3Q8N628 320 aa12.77□□□□□ -0.37
H2AFX-201ENST00000375167 TEX45Q8NA69 505 aa12.77□□□□□ -0.37
H2AFX-201ENST00000375167 TERB2Q8NHR7 220 aa12.77□□□□□ -0.37
H2AFX-201ENST00000375167 TRIM63Q969Q1 353 aa12.77□□□□□ -0.37
H2AFX-201ENST00000375167 RNF126Q9BV68 326 aa12.77□□□□□ -0.37
H2AFX-201ENST00000375167 UBQLN2Q9UHD9 624 aa12.77□□□□□ -0.37
H2AFX-201ENST00000375167 MRGPRG-AS1Q2M3A8 158 aa12.76□□□□□ -0.37
H2AFX-201ENST00000375167 Q6ZR54 194 aa12.76□□□□□ -0.37
H2AFX-201ENST00000375167 RBPMS2Q6ZRY4 209 aaKnown RBP12.76□□□□□ -0.37
H2AFX-201ENST00000375167 OR4C16Q8NGL9 310 aa12.76□□□□□ -0.37
H2AFX-201ENST00000375167 OR11H2Q8NH07 326 aa12.76□□□□□ -0.37
H2AFX-201ENST00000375167 CD300LFQ8TDQ1 290 aa12.76□□□□□ -0.37
H2AFX-201ENST00000375167 TSC22D3Q99576 134 aa12.76□□□□□ -0.37
H2AFX-201ENST00000375167 AIFM2Q9BRQ8 373 aa12.76□□□□□ -0.37
H2AFX-201ENST00000375167 FXYD6Q9H0Q3 95 aa12.76□□□□□ -0.37
H2AFX-201ENST00000375167 MAP6D1Q9H9H5 199 aa12.76□□□□□ -0.37
H2AFX-201ENST00000375167 TRAV10A0A0B4J240 114 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 TRAV25A0A0B4J276 109 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 PIGBOS1A0A0B4J2F0 54 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 FAM223BA6NKX1 122 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 GPR31O00270 319 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 DEFB4AO15263 64 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 RBFOX2O43251 390 aaKnown RBP eCLIP12.75□□□□□ -0.37
H2AFX-201ENST00000375167 RBMXL2O75526 392 aaKnown RBP12.75□□□□□ -0.37
H2AFX-201ENST00000375167 IL7P13232 177 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 PJVKQ0ZLH3 352 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 C1orf134Q5TEV5 83 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 BTNL8Q6UX41 500 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 FAM223AQ8IWN6 122 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 SPAG16Q8N0X2 631 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 CCDC71LQ8N9Z2 235 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 GALNT14Q96FL9 552 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 HRH4Q9H3N8 390 aa12.75□□□□□ -0.37
H2AFX-201ENST00000375167 C14orf166Q9Y224 244 aaKnown RBP12.75□□□□□ -0.37
H2AFX-201ENST00000375167 IGLV2-18A0A075B6J9 118 aa12.74□□□□□ -0.37
H2AFX-201ENST00000375167 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.74□□□□□ -0.37
H2AFX-201ENST00000375167 PGLYRP1O75594 196 aaPredicted RBP12.74□□□□□ -0.37
H2AFX-201ENST00000375167 PGAM2P15259 253 aa12.74□□□□□ -0.37
H2AFX-201ENST00000375167 ATP5G2Q06055 141 aa12.74□□□□□ -0.37
H2AFX-201ENST00000375167 KLF9Q13886 244 aaPredicted RBP12.74□□□□□ -0.37
H2AFX-201ENST00000375167 PRSS8Q16651 343 aa12.74□□□□□ -0.37
H2AFX-201ENST00000375167 FAM209BQ5JX69 171 aa12.74□□□□□ -0.37
H2AFX-201ENST00000375167 AADACL3Q5VUY0 350 aa12.74□□□□□ -0.37
H2AFX-201ENST00000375167 IDO2Q6ZQW0 420 aa12.74□□□□□ -0.37
H2AFX-201ENST00000375167 UXS1Q8NBZ7 420 aa12.74□□□□□ -0.37
H2AFX-201ENST00000375167 OR51H1Q8NH63 302 aa12.74□□□□□ -0.37
H2AFX-201ENST00000375167 SLC25A21Q9BQT8 299 aaPredicted RBP12.74□□□□□ -0.37
H2AFX-201ENST00000375167 CREBL2O60519 120 aaPredicted RBP12.73□□□□□ -0.37
H2AFX-201ENST00000375167 GGCTO75223 188 aaKnown RBP12.73□□□□□ -0.37
H2AFX-201ENST00000375167 B3GALNT1O75752 331 aa12.73□□□□□ -0.37
H2AFX-201ENST00000375167 HRASP01112 189 aa12.73□□□□□ -0.37
H2AFX-201ENST00000375167 AMBPP02760 352 aa12.73□□□□□ -0.37
H2AFX-201ENST00000375167 SAA1P0DJI8 122 aaPredicted RBP12.73□□□□□ -0.37
H2AFX-201ENST00000375167 DEFA1P59665 94 aa12.73□□□□□ -0.37
H2AFX-201ENST00000375167 DEFA3P59666 94 aa12.73□□□□□ -0.37
H2AFX-201ENST00000375167 SSBP2P81877 361 aaPredicted RBP12.73□□□□□ -0.37
H2AFX-201ENST00000375167 RHOGP84095 191 aa12.73□□□□□ -0.37
H2AFX-201ENST00000375167 LHFPL1Q86WI0 220 aa12.73□□□□□ -0.37
H2AFX-201ENST00000375167 CENPSQ8N2Z9 138 aa12.73□□□□□ -0.37
H2AFX-201ENST00000375167 OR4D10Q8NGI6 311 aa12.73□□□□□ -0.37
H2AFX-201ENST00000375167 OR4A5Q8NH83 315 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms